11 #ifndef _SPARSESPATIALSAMPLESTRINGKERNEL_H___
12 #define _SPARSESPATIALSAMPLESTRINGKERNEL_H___
73 void set_d(int32_t max_distance)
88 void set_t(int32_t sequence_length)
104 virtual const char*
get_name()
const {
return "SparseSpatialSampleStringKernel"; }
148 int*
cntsrtna(
int *sx,
int k,
int r,
int na);
157 void countAndUpdate(
int *outK,
int *sx,
int *g,
int k,
int r,
int nStr);