SHOGUN
v2.0.0
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This is the complete list of members for CGUIKernel, including all inherited members.
add_kernel(CKernel *kern, float64_t weight=1) | CGUIKernel | |
build_parameter_dictionary(CMap< TParameter *, CSGObject * > &dict) | CSGObject | |
CGUIKernel() | CGUIKernel | |
CGUIKernel(CSGInterface *interface) | CGUIKernel | |
clean_kernel() | CGUIKernel | |
create_chi2(int32_t size=10, float64_t width=1) | CGUIKernel | |
create_combined(int32_t size=10, bool append_subkernel_weights=false) | CGUIKernel | |
create_commstring(int32_t size=10, bool use_sign=false, char *norm_str=NULL, EKernelType ktype=K_WEIGHTEDCOMMWORDSTRING) | CGUIKernel | |
create_const(int32_t size=10, float64_t c=1) | CGUIKernel | |
create_custom(float64_t *kmatrix, int32_t num_feat, int32_t num_vec, bool source_is_diag, bool dest_is_diag) | CGUIKernel | |
create_diag(int32_t size=10, float64_t diag=1) | CGUIKernel | |
create_distance(int32_t size=10, float64_t width=1) | CGUIKernel | |
create_fixeddegreestring(int32_t size=10, int32_t d=3) | CGUIKernel | |
create_gaussian(int32_t size=10, float64_t width=1) | CGUIKernel | |
create_gaussianshift(int32_t size=10, float64_t width=1, int32_t max_shift=0, int32_t shift_step=1) | CGUIKernel | |
create_histogramword(int32_t size=10) | CGUIKernel | |
create_linear(int32_t size=10, float64_t scale=-1) | CGUIKernel | |
create_linearbyte(int32_t size=10, float64_t scale=-1) | CGUIKernel | |
create_linearstring(int32_t size=10, float64_t scale=-1) | CGUIKernel | |
create_linearword(int32_t size=10, float64_t scale=-1) | CGUIKernel | |
create_localalignmentstring(int32_t size=10) | CGUIKernel | |
create_localityimprovedstring(int32_t size=10, int32_t length=3, int32_t inner_degree=3, int32_t outer_degree=1, EKernelType ktype=K_LOCALITYIMPROVED) | CGUIKernel | |
create_matchwordstring(int32_t size=10, int32_t d=3, bool normalize=true) | CGUIKernel | |
create_oligo(int32_t size, int32_t k, float64_t width) | CGUIKernel | |
create_poly(int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true) | CGUIKernel | |
create_polymatchstring(int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true) | CGUIKernel | |
create_polymatchwordstring(int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true) | CGUIKernel | |
create_salzbergword(int32_t size=10) | CGUIKernel | |
create_sigmoid(int32_t size=10, float64_t gamma=0.01, float64_t coef0=0) | CGUIKernel | |
create_sparsegaussian(int32_t size=10, float64_t width=1) | CGUIKernel | |
create_sparselinear(int32_t size=10, float64_t scale=-1) | CGUIKernel | |
create_sparsepoly(int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true) | CGUIKernel | |
create_spectrummismatchrbf(int32_t size=10, float64_t *AA_matrix=NULL, int32_t nr=128, int32_t nc=128, int32_t max_mismatch=1, int32_t degree=1, float64_t width=1) | CGUIKernel | |
create_tppk(int32_t size, float64_t *km, int32_t rows, int32_t cols) | CGUIKernel | |
create_wavelet(int32_t size=10, float64_t Wdilation=5.0, float64_t Wtranslation=2.0) | CGUIKernel | |
create_weighteddegreepositionstring(int32_t size=10, int32_t order=3, int32_t max_mismatch=1, int32_t length=0, int32_t center=0, float64_t step=1) | CGUIKernel | |
create_weighteddegreepositionstring2(int32_t size=10, int32_t order=3, int32_t max_mismatch=1, int32_t *shifts=NULL, int32_t length=0, bool use_normalization=true) | CGUIKernel | |
create_weighteddegreepositionstring3(int32_t size=10, int32_t order=3, int32_t max_mismatch=1, int32_t *shifts=NULL, int32_t length=0, int32_t mkl_stepsize=1, float64_t *position_weights=NULL) | CGUIKernel | |
create_weighteddegreerbf(int32_t size=10, int32_t degree=1, int32_t nof_properties=1, float64_t width=1) | CGUIKernel | |
create_weighteddegreestring(int32_t size=10, int32_t order=3, int32_t max_mismatch=1, bool use_normalization=true, int32_t mkl_stepsize=1, bool block_computation=true, int32_t single_degree=-1) | CGUIKernel | |
CSGObject() | CSGObject | |
CSGObject(const CSGObject &orig) | CSGObject | |
deep_copy() const | CSGObject | virtual |
del_last_kernel() | CGUIKernel | |
delete_kernel_optimization() | CGUIKernel | |
get_global_io() | CSGObject | |
get_global_parallel() | CSGObject | |
get_global_version() | CSGObject | |
get_kernel() | CGUIKernel | |
get_modelsel_names() | CSGObject | |
get_modsel_param_descr(const char *param_name) | CSGObject | |
get_modsel_param_index(const char *param_name) | CSGObject | |
get_name() const | CGUIKernel | virtual |
init_kernel(const char *target) | CGUIKernel | |
init_kernel_optimization() | CGUIKernel | |
initialized | CGUIKernel | protected |
io | CSGObject | |
is_generic(EPrimitiveType *generic) const | CSGObject | virtual |
is_initialized() | CGUIKernel | |
kernel | CGUIKernel | protected |
load_all_file_parameters(int32_t file_version, int32_t current_version, CSerializableFile *file, const char *prefix="") | CSGObject | |
load_file_parameters(const SGParamInfo *param_info, int32_t file_version, CSerializableFile *file, const char *prefix="") | CSGObject | |
load_serializable(CSerializableFile *file, const char *prefix="", int32_t param_version=VERSION_PARAMETER) | CSGObject | virtual |
load_serializable_post() | CSGObject | protectedvirtual |
load_serializable_pre() | CSGObject | protectedvirtual |
m_hash | CSGObject | |
m_model_selection_parameters | CSGObject | |
m_parameter_map | CSGObject | |
m_parameters | CSGObject | |
map_parameters(DynArray< TParameter * > *param_base, int32_t &base_version, DynArray< const SGParamInfo * > *target_param_infos) | CSGObject | |
migrate(DynArray< TParameter * > *param_base, const SGParamInfo *target) | CSGObject | protectedvirtual |
one_to_one_migration_prepare(DynArray< TParameter * > *param_base, const SGParamInfo *target, TParameter *&replacement, TParameter *&to_migrate, char *old_name=NULL) | CSGObject | protectedvirtual |
parallel | CSGObject | |
precompute_subkernels() | CGUIKernel | |
print_modsel_params() | CSGObject | |
print_serializable(const char *prefix="") | CSGObject | virtual |
resize_kernel_cache(int32_t size) | CGUIKernel | |
save_kernel(char *filename) | CGUIKernel | |
save_serializable(CSerializableFile *file, const char *prefix="", int32_t param_version=VERSION_PARAMETER) | CSGObject | virtual |
save_serializable_post() | CSGObject | protectedvirtual |
save_serializable_pre() | CSGObject | protectedvirtual |
set_generic() | CSGObject | |
set_global_io(SGIO *io) | CSGObject | |
set_global_parallel(Parallel *parallel) | CSGObject | |
set_global_version(Version *version) | CSGObject | |
set_kernel(CKernel *kern) | CGUIKernel | |
set_normalization(char *normalization, float64_t c=0.0, float64_t r=0.0) | CGUIKernel | |
set_optimization_type(char *opt_type) | CGUIKernel | |
shallow_copy() const | CSGObject | virtual |
ui | CGUIKernel | protected |
unset_generic() | CSGObject | |
update_parameter_hash() | CSGObject | protectedvirtual |
version | CSGObject | |
~CGUIKernel() | CGUIKernel | |
~CSGObject() | CSGObject | virtual |