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config.h
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1 #ifndef __SHOGUN_LIB_CONFIG_H__
2 #define __SHOGUN_LIB_CONFIG_H__
3 
4 #define MACHINE "x86_64"
5 #define CONFIGURE_OPTIONS "TODO"
6 #define COMPFLAGS_CPP "-std=c++11 -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -march=native -fopenmp -O3 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -funroll-loops -mfpmath=sse"
7 #define LINKFLAGS "-lpthread;/usr/lib/atlas-base/liblapack_atlas.so.3;/usr/lib/atlas-base/libcblas.so.3;/usr/lib/atlas-base/libf77blas.so.3;/usr/lib/atlas-base/libatlas.so.3;/usr/lib/liblapack.so.3;/usr/lib/libglpk.so;/usr/lib/libparpack.so;/usr/lib/x86_64-linux-gnu/libnlopt.so;/usr/lib/liblpsolve55.a;/usr/local/lib/libColPack.so;/usr/local/lib/libarprec.a;-ljson-c;/usr/lib/x86_64-linux-gnu/libxml2.so;debug;/usr/lib/libhdf5.so;debug;/usr/lib/x86_64-linux-gnu/libpthread.so;debug;/usr/lib/x86_64-linux-gnu/libz.so;debug;/usr/lib/x86_64-linux-gnu/librt.so;debug;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5.so;optimized;/usr/lib/x86_64-linux-gnu/libpthread.so;optimized;/usr/lib/x86_64-linux-gnu/libz.so;optimized;/usr/lib/x86_64-linux-gnu/librt.so;optimized;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libbz2.so;/usr/lib/x86_64-linux-gnu/liblzma.so;/usr/lib/libsnappy.so;/usr/lib/x86_64-linux-gnu/liblzo2.so"
8 
9 #define SFMT_MEXP 19937
10 #define DSFMT_MEXP 19937
11 
12 #define HAVE_HDF5 1
13 #define HAVE_CURL 1
14 #define HAVE_JSON 1
15 #define HAVE_XML 1
16 #define HAVE_LARGEFILE 1
17 #define HAVE_DOXYGEN 1
18 #define HAVE_LAPACK 1
19 /* #undef HAVE_MVEC */
20 /* #undef HAVE_PROTOBUF */
21 
22 #define HAVE_ARPACK 1
23 #define HAVE_EIGEN3 1
24 /* #undef HAVE_VIENNACL */
25 /* #undef HAVE_OPENCV */
26 /* #undef HAVE_CATLAS */
27 #define HAVE_ATLAS 1
28 #define HAVE_NLOPT 1
29 #define USE_LPSOLVE 1
30 #define HAVE_PTHREAD 1
31 /* #undef USE_CPLEX */
32 #define HAVE_COLPACK 1
33 #define HAVE_ARPREC 1
34 
35 #define HAVE_POWL 1
36 #define HAVE_LGAMMAL 1
37 #define HAVE_SQRTL 1
38 #define HAVE_LOG2 1
39 /* #undef USE_LOGCACHE */
40 /* #undef USE_LOGSUMARRAY */
41 
42 /* Tells ViennaCL to use OpenCL as computation backend */
43 #define VIENNACL_WITH_OPENCL 1
44 
45 /* for linear algebra global backend setups */
46 #define HAVE_LINALG_LIB 1
47 
48 /* #undef USE_EIGEN3 */
49 /* #undef USE_VIENNACL */
50 
51 /* #undef USE_EIGEN3_REDUX */
52 /* #undef USE_VIENNACL_REDUX */
53 
54 /* #undef USE_EIGEN3_LINSLV */
55 /* #undef USE_VIENNACL_LINSLV */
56 
57 /* #undef USE_EIGEN3_EIGSLV */
58 /* #undef USE_VIENNACL_EIGSLV */
59 
60 /* Define to 1 if you have the declaration of `isfinite', and to 0 if you
61  don't. */
62 /* #undef HAVE_DECL_ISFINITE */
63 
64 /* Define to 1 if you have the declaration of `isinf', and to 0 if you don't. */
65 #define HAVE_DECL_ISINF 1
66 
67 /* Define to 1 if you have the declaration of `isnan', and to 0 if you don't. */
68 #define HAVE_DECL_ISNAN 1
69 
70 /* Define to 1 if you have the `finite' function. */
71 /* #undef HAVE_FINITE */
72 
73 /* Define to 1 if you have the `fpclass' function. */
74 #define HAVE_FPCLASS 1
75 
76 /* Define to 1 if you have the `isfinite' function. */
77 /* #undef HAVE_ISFINITE */
78 
79 /* Define to 1 if you have the `isinf' function. */
80 #define HAVE_ISINF 1
81 
82 /* Define to 1 if you have the `isnan' function. */
83 #define HAVE_ISNAN 1
84 
85 /* Define to 1 if you have the `std::isfinite' function. */
86 #define HAVE_STD_ISFINITE 1
87 
88 /* Define to 1 if you have the `std::isinf' function. */
89 #define HAVE_STD_ISINF 1
90 
91 /* Define to 1 if you have the `std::isnan' function. */
92 #define HAVE_STD_ISNAN 1
93 
94 #define USE_SPINLOCKS 1
95 #define USE_SHORTREAL_KERNELCACHE 1
96 #define USE_BIGSTATES 1
97 
98 /* #undef USE_HMMDEBUG */
99 #define USE_HMMCACHE 1
100 /* #undef USE_HMMPARALLEL */
101 /* #undef USE_HMMPARALLEL_STRUCTURES */
102 
103 /* #undef USE_PATHDEBUG */
104 
105 #define USE_SVMLIGHT 1
106 /* #undef USE_MOSEK */
107 
108 #define USE_GLPK 1
109 #define USE_LZO 1
110 #define USE_GZIP 1
111 #define USE_BZIP2 1
112 #define USE_LZMA 1
113 #define USE_REFERENCE_COUNTING 1
114 #define USE_SNAPPY 1
115 
116 #define HAVE_SSE2 1
117 #define HAVE_BUILTIN_VECTOR 1
118 /* #undef OCTAVE_APIVERSION */
119 
120 /* #undef DARWIN */
121 /* #undef FREEBSD */
122 #define LINUX 1
123 
124 /* #undef USE_SWIG_DIRECTORS */
125 /* #undef TRACE_MEMORY_ALLOCS */
126 /* #undef USE_JEMALLOC */
127 
128 /* #undef NARRAY_LIB */
129 
130 /* #undef HAVE_CXX0X */
131 #define HAVE_CXX11 1
132 #define HAVE_CXX11_ATOMIC 1
133 #define HAVE_STD_UNORDERED_MAP 1
134 
135 /* #undef HAVE_JBLAS */
136 
137 /* random related defines */
138 /* #undef HAVE_ARC4RANDOM */
139 #define DEV_RANDOM "/dev/urandom"
140 
141 #endif /* __SHOGUN_LIB_CONFIG_H__ */

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