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config.h
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1 #ifndef __SHOGUN_LIB_CONFIG_H__
2 #define __SHOGUN_LIB_CONFIG_H__
3 
4 #define MACHINE "x86_64"
5 #define CONFIGURE_OPTIONS "TODO"
6 #define COMPFLAGS_CPP "-std=c++11 -Wall -Wno-unused-parameter -Wformat -Wformat-security -Wparentheses -Wshadow -Wno-unknown-pragmas -Wno-deprecated -fopenmp -O3 -fexpensive-optimizations -frerun-cse-after-loop -fcse-follow-jumps -finline-functions -fschedule-insns2 -fthread-jumps -fforce-addr -fstrength-reduce -funroll-loops -mfpmath=sse"
7 #define LINKFLAGS "-lpthread;/usr/lib/liblapack.so;/usr/lib/libf77blas.so.3gf;/usr/lib/libatlas.so.3gf;/usr/lib/libcblas.so.3;/usr/lib/x86_64-linux-gnu/libglpk.so;/usr/lib/libparpack.so;/usr/lib/x86_64-linux-gnu/libnlopt.so;/usr/lib/liblpsolve55.a;/usr/local/lib/libColPack.so;-ljson-c;/usr/lib/x86_64-linux-gnu/libxml2.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libbz2.so;/usr/lib/x86_64-linux-gnu/liblzma.so;/usr/lib/libsnappy.so;/usr/lib/x86_64-linux-gnu/liblzo2.so"
8 
9 #define SFMT_MEXP 19937
10 #define DSFMT_MEXP 19937
11 
12 #define HAVE_HDF5 1
13 #define HAVE_CURL 1
14 #define HAVE_JSON 1
15 #define HAVE_XML 1
16 #define HAVE_LARGEFILE 1
17 #define HAVE_DOXYGEN 1
18 #define HAVE_LAPACK 1
19 /* #undef HAVE_MVEC */
20 /* #undef HAVE_PROTOBUF */
21 
22 #define HAVE_ARPACK 1
23 /* #undef HAVE_VIENNACL */
24 /* #undef VIENNACL_VERSION */
25 /* #undef HAVE_OPENCV */
26 /* #undef HAVE_CATLAS */
27 /* #undef HAVE_ATLAS */
28 /* #undef HAVE_MKL */
29 #define HAVE_NLOPT 1
30 #define USE_LPSOLVE 1
31 #define HAVE_PTHREAD 1
32 #define HAVE_OPENMP 1
33 /* #undef USE_CPLEX */
34 #define HAVE_COLPACK 1
35 /* #undef HAVE_ARPREC */
36 
37 #define HAVE_POWL 1
38 #define HAVE_LGAMMAL 1
39 #define HAVE_SQRTL 1
40 #define HAVE_LOG2 1
41 /* #undef USE_LOGCACHE */
42 /* #undef USE_LOGSUMARRAY */
43 
44 /* Tells ViennaCL to use OpenCL as computation backend */
45 #define VIENNACL_WITH_OPENCL 1
46 
47 /* for linear algebra global backend setups */
48 #define HAVE_LINALG_LIB 1
49 
50 #define USE_EIGEN3 1
51 /* #undef USE_VIENNACL */
52 
53 #define USE_EIGEN3_CORE 1
54 /* #undef USE_VIENNACL_CORE */
55 
56 #define USE_EIGEN3_REDUX 1
57 /* #undef USE_VIENNACL_REDUX */
58 
59 /* #undef USE_EIGEN3_LINSLV */
60 /* #undef USE_VIENNACL_LINSLV */
61 
62 #define USE_EIGEN3_EIGSLV 1
63 /* #undef USE_VIENNACL_EIGSLV */
64 
65 /* Define to 1 if you have the declaration of `isfinite', and to 0 if you
66  don't. */
67 /* #undef HAVE_DECL_ISFINITE */
68 
69 /* Define to 1 if you have the declaration of `isinf', and to 0 if you don't. */
70 #define HAVE_DECL_ISINF 1
71 
72 /* Define to 1 if you have the declaration of `isnan', and to 0 if you don't. */
73 #define HAVE_DECL_ISNAN 1
74 
75 /* Define to 1 if you have the `finite' function. */
76 /* #undef HAVE_FINITE */
77 
78 /* Define to 1 if you have the `fpclass' function. */
79 #define HAVE_FPCLASS 1
80 
81 /* Define to 1 if you have the `isfinite' function. */
82 /* #undef HAVE_ISFINITE */
83 
84 /* Define to 1 if you have the `isinf' function. */
85 #define HAVE_ISINF 1
86 
87 /* Define to 1 if you have the `isnan' function. */
88 #define HAVE_ISNAN 1
89 
90 /* Define to 1 if you have the `std::isfinite' function. */
91 #define HAVE_STD_ISFINITE 1
92 
93 /* Define to 1 if you have the `std::isinf' function. */
94 #define HAVE_STD_ISINF 1
95 
96 /* Define to 1 if you have the `std::isnan' function. */
97 #define HAVE_STD_ISNAN 1
98 
99 #define HAVE_DECL_SIGNGAM 1
100 
101 #define HAVE_FDOPEN 1
102 
103 #define USE_SPINLOCKS 1
104 #define USE_SHORTREAL_KERNELCACHE 1
105 #define USE_BIGSTATES 1
106 
107 /* #undef USE_HMMDEBUG */
108 #define USE_HMMCACHE 1
109 /* #undef USE_HMMPARALLEL */
110 /* #undef USE_HMMPARALLEL_STRUCTURES */
111 
112 /* #undef USE_PATHDEBUG */
113 
114 #define USE_SVMLIGHT 1
115 /* #undef USE_MOSEK */
116 #define USE_GPL_SHOGUN 1
117 
118 #define USE_GLPK 1
119 #define USE_LZO 1
120 #define USE_GZIP 1
121 #define USE_BZIP2 1
122 #define USE_LZMA 1
123 #define USE_REFERENCE_COUNTING 1
124 #define USE_SNAPPY 1
125 
126 #define HAVE_SSE2 1
127 #define HAVE_BUILTIN_VECTOR 1
128 /* #undef OCTAVE_APIVERSION */
129 
130 /* #undef DARWIN */
131 /* #undef FREEBSD */
132 #define LINUX 1
133 
134 /* #undef USE_SWIG_DIRECTORS */
135 /* #undef TRACE_MEMORY_ALLOCS */
136 /* #undef USE_JEMALLOC */
137 
138 /* #undef NARRAY_LIB */
139 
140 /* #undef HAVE_CXX0X */
141 #define HAVE_CXX11 1
142 #define HAVE_CXX11_ATOMIC 1
143 #define HAVE_STD_UNORDERED_MAP 1
144 
145 /* random related defines */
146 /* #undef HAVE_ARC4RANDOM */
147 #define DEV_RANDOM "/dev/urandom"
148 
149 #endif /* __SHOGUN_LIB_CONFIG_H__ */

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