| --- Log opened Wed Jan 23 00:00:38 2013 | ||
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| shogun-buildbot | build #259 of nightly_default is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_default/builds/259 | 03:47 |
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| -!- sonney2k changed the topic of #shogun to: Shogun Machine Learning Toolbox | Workshop upcoming July 12, Berlin C-Base http://bit.ly/146Jtv8 | When asking questions please be patient or use the mailing list. We always answer but it might take a while. | Channel logs http://bit.ly/eQDk8Q | 08:45 | |
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| sonne|work | Ohttp://planet.debian.org/ | 10:44 |
| sonne|work | I've announced things on my blog too so it is now on planet ^ | 10:44 |
| blackburn | sonne|work: nice! | 10:45 |
| blackburn | it has quite a lot readers, right? | 10:45 |
| sonne|work | yes | 10:45 |
| blackburn | sonne|work: | 10:47 |
| blackburn | What did one support vector say to another support vector? | 10:47 |
| blackburn | I feel so marginalized. | 10:47 |
| sonne|work | that would work with distributions too :) | 10:47 |
| blackburn | yeah | 10:47 |
| wiking | :> | 10:58 |
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| heiko | workshop meeting looks like saturday | 16:31 |
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| tomv_ | hello. I am trying to compile shogun 2.0 for Debian (using the 1.x packages as base). Unfortunately, the python-modular seems to have problems with string.h vs. cstring. Have you seen (and possibly resolved) this? | 22:21 |
| blackburn | tomv_: hey | 22:24 |
| blackburn | tomv_: could you please paste the error? | 22:25 |
| tomv_ | In file included from modshogun_wrap.cxx:9562: | 22:29 |
| tomv_ | /usr/bin/../lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/cstring:101:3: error: declaration conflicts with target of using declaration already in scope | 22:29 |
| tomv_ | memchr(void* __s, int __c, size_t __n) | 22:29 |
| tomv_ | and some more of the same variety. | 22:29 |
| tomv_ | this is with clang | 22:29 |
| tomv_ | clang++ -g -fPIC -O0 -DSWIG_TYPE_TABLE=shogun -DSHOGUN -DLINUX -DUSE_BOOL -DUSE_CHAR -DUSE_UINT8 -DUSE_UINT16 -DUSE_INT32 -DUSE_INT64 -DUSE_UINT64 -DUSE_FLOAT32 -DUSE_FLOAT64 -DHAVE_POWL -DHAVE_LGAMMAL -DHAVE_SQRTL -DHAVE_LOG2 -DHAVE_PTHREAD -DHAVE_HDF5 -DHAVE_JSON -DHAVE_XML -DHAVE_ATLAS -DHAVE_LAPACK -DHAVE_SUPERLU -DHAVE_ARPACK -DUSE_GLPK -DUSE_LZO -DUSE_SNAPPY -DUSE_GZIP -DUSE_BZIP2 -DUSE_LZMA -DHAVE_LARGEFILE -DUSE_SHORTREAL_KERNELCACHE -DUSE | 22:29 |
| tomv_ | _BIGSTATES -DUSE_HMMCACHE -DUSE_REFERENCE_COUNTING -DGPL -DUSE_SPINLOCKS -DHAVE_DOXYGEN -DHAVE_PYTHON -c -I. -I.. -I/usr/include/json -I/usr/include/libxml2 -I/usr/include/atlas -I../../shogun -I../.. -I/usr/include/python2.7 -I/usr/lib/pymodules/python2.7/numpy/core/include -o modshogun_wrap.cxx.o modshogun_wrap.cxx | 22:29 |
| tomv_ | (sorry for the flooding) | 22:30 |
| blackburn | tomv_: I've never seen such error to be honest.. but let me try to help you somehow | 22:32 |
| tomv_ | well, I have seen somewhere that clang has stopped using std:: or somesuch. | 22:33 |
| tomv_ | I think it might be that you can only include ctring and string.h in a certain order or something. | 22:33 |
| blackburn | tomv_: okay I think we can find some solution | 22:36 |
| blackburn | tomv_: could you please remove line 71 in src/interfaces/python_modular/protocols_helper.i? | 22:37 |
| blackburn | then try to recompile - should work | 22:37 |
| tomv_ | doesn't look good. | 22:43 |
| blackburn | tomv_: still? bad bad | 22:44 |
| tomv_ | but something went wrong with regenerating the .cxx from .i, I'll check this some more an be back in a minute. | 22:45 |
| blackburn | tomv_: what is the error now? | 22:45 |
| blackburn | if it doesn't help could you also try to replace that line with #include <string.h>? | 22:45 |
| blackburn | i am not sure about that but it doesn't happen to reproduce on my machine so I'd need you help there | 22:46 |
| tomv_ | blackburn: thanks! the problem just now was that the debian packaging copied around the .i and so it always took the copy of the old version. I am sure that the error will either be resolved or different now. | 22:54 |
| blackburn | tomv_: nice | 22:54 |
| tomv_ | I'll let you know which once I know. :) | 22:54 |
| blackburn | tomv_: sure - I am going to get some sleep in 15-30 mins though but just paste it here I'll read that later (or post on the mailing list) | 22:57 |
| tomv_ | ok. | 22:58 |
| tomv_ | I'll probably not try too long, but report tomorrow. good night and thanks! | 22:58 |
| tomv_ | now I 'make clean'ed too good and it recompiles shogun, so it'll be tomorrow. good night! | 23:07 |
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| --- Log closed Thu Jan 24 00:00:38 2013 | ||
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