| --- Log opened Mon Mar 04 00:00:58 2013 | ||
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| shogun-notifier- | shogun: Sergey Lisitsyn :master * 2717831 / src/shogun/lib/tapkee/ (26 files): https://github.com/shogun-toolbox/shogun/commit/2717831d542a4cdda4b68ced2efff9d018ee85cf | 07:50 |
|---|---|---|
| shogun-notifier- | shogun: Updated tapkee library | 07:50 |
| shogun-notifier- | shogun: | 07:50 |
| shogun-notifier- | shogun: - Better parameters handling: proper invariants to avoid bugs | 07:50 |
| shogun-notifier- | shogun: - Better exceptions usage | 07:50 |
| shogun-notifier- | shogun: - Better naming of types | 07:50 |
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| shogun-buildbot_ | build #272 of rpm1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/272 | 08:04 |
| shogun-buildbot_ | build #262 of ubu1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/ubu1%20-%20libshogun/builds/262 | 08:22 |
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| shogun-buildbot_ | build #861 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/861 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 08:29 |
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| blackburn | n4nd0: the magic doesn't work with VS :( | 10:10 |
| n4nd0 | blackburn: too bad | 10:14 |
| n4nd0 | it crashes? | 10:14 |
| n4nd0 | blackburn: some guards if in windows maybe? | 10:15 |
| blackburn | n4nd0: I think I find a way | 10:15 |
| blackburn | n4nd0: fixing compilation on windows now | 10:16 |
| n4nd0 | gl | 10:16 |
| blackburn | whoa | 10:17 |
| blackburn | built | 10:17 |
| n4nd0 | hurray! | 10:17 |
| blackburn | n4nd0: it fails on runtime though :D | 10:22 |
| n4nd0 | damn it | 10:23 |
| n4nd0 | blackburn: what's the problem? | 10:23 |
| blackburn | n4nd0: parser I guess | 10:23 |
| blackburn | n4nd0: could you please paste swissroll data somewhere? | 10:24 |
| n4nd0 | blackburn: sure | 10:25 |
| n4nd0 | blackburn: 1000 is fine? | 10:25 |
| blackburn | n4nd0: yes | 10:27 |
| n4nd0 | blackburn: http://pastebin.com/7P8YGuUa | 10:28 |
| blackburn | thanks | 10:29 |
| n4nd0 | you are welcome | 10:29 |
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| alexlovesdata | blackburn: sonne: Did I do a pull request? | 10:40 |
| alexlovesdata | It looks in github like I did not so any?? | 10:40 |
| n4nd0 | hey alexlovesdata | 10:44 |
| n4nd0 | I think you did it | 10:44 |
| n4nd0 | check here | 10:44 |
| n4nd0 | https://github.com/shogun-toolbox/shogun/pull/901 | 10:44 |
| n4nd0 | alexlovesdata: is it that one the one you were looking for? | 10:44 |
| alexlovesdata | ye ... thank Fernando ... I just did not see the pull request in github and so I wondered whether I was dreaming two nights ago at 4 am | 10:45 |
| n4nd0 | hehe | 10:45 |
| n4nd0 | alexlovesdata: maybe you were looking in your fork of shogun here | 10:46 |
| n4nd0 | https://github.com/AlexBinder/shogun | 10:46 |
| n4nd0 | while the pull request appears in the repository where you want to introduce the code, in this cade the one by shogun-toolbox user | 10:46 |
| alexlovesdata | yes, I was looking there indeed .. | 10:46 |
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| blackburn | alexlovesdata: yeah - sorry I hadn't enough time to take a look | 11:41 |
| blackburn | n4nd0: okay covertree fails under VS 2012 | 11:43 |
| n4nd0 | blackburn: shit | 11:45 |
| blackburn | n4nd0: brute method works though | 11:45 |
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| n4nd0 | blackburn: any idea what is from the cover tree that makes it fail? | 12:45 |
| blackburn | n4nd0: will try to debug later | 12:45 |
| blackburn | n4nd0: could you please try to fix current build error? | 12:45 |
| blackburn | I have no linux around | 12:45 |
| n4nd0 | blackburn: let me see | 12:45 |
| blackburn | it fails to link - I have done something wrong in CMakeLists | 12:46 |
| blackburn | n4nd0: around line 30 :) | 12:47 |
| n4nd0 | blackburn: last commit was it right? | 12:47 |
| blackburn | n4nd0: last commit was an atttempt to fix it | 12:48 |
| n4nd0 | aham | 12:48 |
| n4nd0 | blackburn: this is the error I get | 12:48 |
| n4nd0 | cmake: error while loading shared libraries: libarchive.so.12: cannot open shared object file: No such file or directory | 12:48 |
| blackburn | ehm | 12:49 |
| blackburn | never seen that | 12:49 |
| n4nd0 | blackburn: hehe so that was not the bug you meant? | 12:49 |
| blackburn | no | 12:49 |
| blackburn | n4nd0: https://travis-ci.org/lisitsyn/tapkee/jobs/5222900 | 12:50 |
| n4nd0 | blackburn: or the error ^ must be someting mine, let me try | 12:50 |
| blackburn | n4nd0: missed dsaupd is the error (because target_link_libraries wasn't done properly for some reason) | 12:51 |
| n4nd0 | just needed to update cmake, that's why the error I pasted | 12:52 |
| n4nd0 | blackburn: mmmm make worked totally fine here | 12:54 |
| blackburn | n4nd0: cd build && rm -rf * && cmake .. && make ? | 12:55 |
| n4nd0 | yep | 12:55 |
| blackburn | n4nd0: did you update? | 12:56 |
| n4nd0 | Update CMakeLists.txt is the last commit I have | 12:56 |
| n4nd0 | https://github.com/lisitsyn/tapkee/commits/master | 12:56 |
| blackburn | hmm okay travis is outdated | 12:56 |
| blackburn | thanks | 12:56 |
| n4nd0 | blackburn: maybe it needs a make clean or the like in there? | 12:57 |
| blackburn | rm -rf * is total clean | 12:57 |
| n4nd0 | I meant in travis | 12:57 |
| n4nd0 | does it do that? | 12:57 |
| blackburn | ah | 12:57 |
| blackburn | yes it cleans whole system | 12:58 |
| blackburn | :D | 12:58 |
| n4nd0 | hehe ok | 12:58 |
| blackburn | you may see it installs packages each time | 12:58 |
| blackburn | I expect there is a pool of workers which load image and start build | 12:58 |
| n4nd0 | true | 12:58 |
| n4nd0 | blackburn: so mmm can we make it work in travis somehow? | 12:59 |
| blackburn | works | 12:59 |
| n4nd0 | cool | 13:00 |
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| shogun-notifier- | shogun: Heiko Strathmann :master * ee46d69 / src/shogun/statistics/ (18 files): https://github.com/shogun-toolbox/shogun/commit/ee46d692854f976a0f7cd4e7b61ca26f1c0e809e | 14:28 |
| shogun-notifier- | shogun: updated documentation for kernel MMD two-sample testing | 14:28 |
| shogun-notifier- | shogun: Heiko Strathmann :master * c9ebee6 / src/shogun/statistics/ (18 files): https://github.com/shogun-toolbox/shogun/commit/c9ebee62f05c6ea6af63df1327c62c424612c3ef | 14:28 |
| shogun-notifier- | shogun: Merge pull request #902 from karlnapf/master | 14:28 |
| shogun-notifier- | shogun: | 14:28 |
| shogun-notifier- | shogun: Massive documentation update | 14:28 |
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| shogun-buildbot_ | build #906 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/906 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 14:34 |
| shogun-buildbot_ | build #905 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/905 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 14:40 |
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| shogun-notifier- | shogun: Heiko Strathmann :master * de8de4d / src/shogun/features/streaming/generators/GaussianBlobsDataGenerator.cpp: https://github.com/shogun-toolbox/shogun/commit/de8de4d6ba7cf92ae06959e1ba359f964371abd1 | 17:29 |
| shogun-notifier- | shogun: registered some parameters | 17:29 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 8d02af9 / src/shogun/statistics/MMDKernelSelection.h: https://github.com/shogun-toolbox/shogun/commit/8d02af999d4cb92403cf9ba777974544feedb6b2 | 17:29 |
| shogun-notifier- | shogun: removed doxygen warning | 17:29 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 4b3a255 / src/shogun/io/streaming/StreamingFileFromDenseFeatures.h: https://github.com/shogun-toolbox/shogun/commit/4b3a255f3cf562eb6883fb4817e244120b8fba1a | 17:29 |
| shogun-notifier- | shogun: removed warning | 17:29 |
| shogun-notifier- | shogun: Heiko Strathmann :master * ba3be92 / tests/unit/kernel/CustomKernel_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/ba3be927e2fd70f9634dc9d6a06467a9dcf4413d | 17:29 |
| shogun-notifier- | shogun: removed unnecessary remove subset command | 17:29 |
| shogun-notifier- | shogun: Heiko Strathmann :master * cb17caa / tests/unit/statistics/MMDKernelSelectionCombMaxL2_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/cb17caabf2eb22782decb63ee030c6c883349b11 | 17:29 |
| shogun-notifier- | shogun: made test compile again | 17:29 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 24ea0be / / (5 files): https://github.com/shogun-toolbox/shogun/commit/24ea0beaead39df3c6b6a68a78b77e6236f117ca | 17:29 |
| shogun-notifier- | shogun: Merge pull request #903 from karlnapf/master | 17:29 |
| blackburn | heiko: we should rename tests/unit to tests/heiko in the name of you | 17:32 |
| shogun-buildbot_ | build #908 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/908 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 17:33 |
| heiko | blackburn: yes!!! :) | 17:33 |
| shogun-buildbot_ | build #909 of deb1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/909 | 17:34 |
| heiko | blackburn: I am almost done with my release critical stuff | 17:35 |
| blackburn | heiko: that's cool - I hope soeren will get back soon | 17:36 |
| blackburn | heiko: well, I am almost done with my stuff too | 17:37 |
| heiko | blackburn: nice! | 17:37 |
| heiko | blackburn: so no hunt warnings, write documentation :) This will be a good release! | 17:37 |
| heiko | blackburn: I just want to try some matlab examples | 17:38 |
| blackburn | heiko: I will try to prepare some unittests for dim reduction | 17:38 |
| shogun-buildbot_ | build #907 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/907 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 17:40 |
| shogun-notifier- | shogun: Heiko Strathmann :master * a86a0f3 / src/shogun/statistics/MMDKernelSelectionMedian.cpp: https://github.com/shogun-toolbox/shogun/commit/a86a0f37c6cb781be194fd1bfab76e96fe76580b | 17:58 |
| shogun-notifier- | shogun: fixed intendation | 17:58 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 3dc5ac0 / examples/undocumented/python_modular/graphical/statistics_linear_time_mmd.py: https://github.com/shogun-toolbox/shogun/commit/3dc5ac0db43f0400ecb22f7c50664a6f407c8abf | 17:58 |
| shogun-notifier- | shogun: made example work again | 17:58 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 7e8d80c / examples/undocumented/python_modular/graphical/statistics_linear_time_mmd.py: https://github.com/shogun-toolbox/shogun/commit/7e8d80c82ed31d265f8435273f3061a8a0100f1e | 17:58 |
| shogun-notifier- | shogun: minor fix | 17:58 |
| shogun-notifier- | shogun: Heiko Strathmann :master * ec2c6ef / examples/undocumented/python_modular/graphical/statistics_quadratic_time_mmd.py: https://github.com/shogun-toolbox/shogun/commit/ec2c6efb07210fb978e384467b4cbad18d3c5883 | 17:58 |
| shogun-notifier- | shogun: made example work again | 17:58 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 0dc8b38 / / (3 files): https://github.com/shogun-toolbox/shogun/commit/0dc8b38f8fe0fa429dae0377885c11a26119935a | 17:58 |
| shogun-notifier- | shogun: Merge pull request #904 from karlnapf/master | 17:58 |
| shogun-notifier- | shogun: | 17:58 |
| shogun-notifier- | shogun: made graphical examples for MMD work again | 17:58 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 17f5597 / examples/undocumented/python_modular/graphical/statistics_hsic.py: https://github.com/shogun-toolbox/shogun/commit/17f5597447cbf6d04296045a4b3b312b646bc9a9 | 18:03 |
| shogun-notifier- | shogun: made hsic graphical example work again | 18:03 |
| shogun-notifier- | shogun: Heiko Strathmann :master * 0dcf086 / examples/undocumented/python_modular/graphical/statistics_hsic.py: https://github.com/shogun-toolbox/shogun/commit/0dcf0866aeb8bac9474d9a15277fc92735c65fab | 18:03 |
| shogun-notifier- | shogun: Merge pull request #905 from karlnapf/master | 18:03 |
| shogun-notifier- | shogun: | 18:03 |
| shogun-notifier- | shogun: fixed hsic graphical example | 18:03 |
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| shogun-buildbot | build #593 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/593 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 18:31 |
| shogun-buildbot | build #862 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/862 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 18:32 |
| heiko | blackburn: around? | 18:40 |
| heiko | blackburn: how to use shogun from matlab? | 18:40 |
| alexlovesdata | @heiko: | 18:45 |
| heiko | alexlovesdata: hi | 18:45 |
| alexlovesdata | matlab static creates a sg.mexglx or a sg.mexa64 | 18:45 |
| alexlovesdata | you copy it in some path | 18:45 |
| heiko | I see, so I have to do this manually? | 18:45 |
| alexlovesdata | and do in matlab sgpath= 'that path' | 18:46 |
| alexlovesdata | addpath(sgpath) | 18:46 |
| heiko | cool I will try that, thx | 18:46 |
| alexlovesdata | you need to tell matlab where sg.mexa64 is | 18:46 |
| alexlovesdata | then you cna use static interfaces which are a bit outdated | 18:46 |
| heiko | alexlovesdata: so new shogun classes are not automatically available for these right? | 18:46 |
| alexlovesdata | Heiko? : suggestion for interface of unittest ... I am a stupid mathematician with thick glasses | 18:47 |
| heiko | alexlovesdata: yes, we have this new framework for it. Its yet a bit hacky but works | 18:47 |
| alexlovesdata | ye, new shogun classes are not per default available unless the interfaces are coded as commands | 18:47 |
| heiko | see the tests folder | 18:47 |
| heiko | tests/unit/ ... | 18:48 |
| alexlovesdata | one could imagine to auto-create interfaces in static interfaces | 18:48 |
| alexlovesdata | @heiko: thx ... will look into that today later | 18:48 |
| heiko | you create a file with a similar naming as the existing ones | 18:48 |
| heiko | and then need to import the gtest and gmock header | 18:48 |
| heiko | but this is all in the existing tests | 18:48 |
| heiko | you need to manually download gtest and gmock and provide their path to configure | 18:48 |
| alexlovesdata | i will check that when I have time :) | 18:54 |
| shogun-buildbot | build #863 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/863 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 19:00 |
| heiko | blackburn: the above error is tapkee | 19:00 |
| alexlovesdata | hi heiko. I read your email, the solution is simple | 19:01 |
| heiko | alexlovesdata: cool :) what is it? | 19:01 |
| alexlovesdata | you need to compile with an older C++ version which is compatible with the C++ version used to cmopile matlab libraries | 19:01 |
| heiko | uargh | 19:02 |
| heiko | that is ugly | 19:02 |
| alexlovesdata | -cc=gcc-4.x -cxx=g++-4.x | 19:02 |
| alexlovesdata | but it solves the issue | 19:02 |
| heiko | but ok, thanks for the hint | 19:02 |
| alexlovesdata | matlab ships its own version of libraries including some boost libraries | 19:03 |
| alexlovesdata | and these get used when you run matlab | 19:03 |
| heiko | I see | 19:03 |
| heiko | btw have you ever written a matlab interface? I wonder how much work that would be | 19:03 |
| heiko | since I want to make my stuff available from matlab | 19:04 |
| alexlovesdata | it is not so much work | 19:04 |
| alexlovesdata | maybe 15 minutes per command | 19:04 |
| heiko | Is a lot of thinking involved? :) | 19:04 |
| alexlovesdata | I know what I have to do when I look into it ... | 19:04 |
| alexlovesdata | no ... for an IT guy it is a low-brainer | 19:04 |
| heiko | ok, Ill look into some examples | 19:05 |
| alexlovesdata | basically you have to define the command syntax ... and then 2 interfaces | 19:05 |
| heiko | cool, thanks a lot | 19:06 |
| alexlovesdata | src/shogun/ui/GUICommands.h | 19:08 |
| alexlovesdata | src/shogun/ui/SGInterface.h | 19:15 |
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| blackburn | heiko: whoo | 19:27 |
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| shogun-notifier- | shogun: Sergey Lisitsyn :master * 55855d4 / src/shogun/lib/tapkee/tapkee_shogun.cpp: https://github.com/shogun-toolbox/shogun/commit/55855d479e6fef46d5f5b06c51612877b39058f5 | 20:36 |
| shogun-notifier- | shogun: Added missed number of vectors setting for FA | 20:36 |
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| shogun-buildbot | build #311 of nightly_default is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_default/builds/311 | 20:47 |
| shogun-buildbot | build #594 of cyg1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/594 | 21:00 |
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| shogun-buildbot | build #864 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/864 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 21:24 |
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| @sonney2k | alexlovesdata, did you see my messages about your fourier features? | 21:56 |
| shogun-notifier- | shogun: Sergey Lisitsyn :master * adb36ad / src/shogun/lib/tapkee/ (8 files): https://github.com/shogun-toolbox/shogun/commit/adb36ad022b558983f530802cd0832392f783c7e | 22:06 |
| shogun-notifier- | shogun: Updates for tapkee | 22:06 |
| shogun-notifier- | shogun: | 22:06 |
| shogun-notifier- | shogun: - MSVS compatibility | 22:06 |
| shogun-notifier- | shogun: - Better checkers | 22:06 |
| shogun-buildbot | build #865 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/865 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 22:54 |
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| alexlovesdata | sonney2: no I did not see :( | 23:17 |
| alexlovesdata | in the chat? at what time+ day? | 23:17 |
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| --- Log closed Tue Mar 05 00:00:59 2013 | ||
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