| --- Log opened Sat May 11 00:00:36 2013 | ||
| --- Day changed Sat May 11 2013 | ||
| @sonney2k | dvalcarce, or which branch is it? | 00:00 |
|---|---|---|
| dvalcarce | sonney2k, classification branch should work | 00:01 |
| dvalcarce | sonney2k, I can take a screenshot if you want | 00:01 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * f511ae1 / examples/undocumented/python_modular/converter_factoranalysis_modular.py: https://github.com/shogun-toolbox/shogun/commit/f511ae16085d133b4db6e3e03e49d343312ca027 | 00:02 |
| shogun-notifier- | shogun: Temporary fix for Factor Analysis example that is undeterministic, | 00:02 |
| shogun-notifier- | shogun: checks determinant of covariance matrix is positive | 00:02 |
| shogun-notifier- | shogun: cameron :develop * af7e5c1 / examples/undocumented/python_modular/graphical/interactive_gp_demo.py: https://github.com/shogun-toolbox/shogun/commit/af7e5c1639efa18b06b803e4df61c02dba1fb1b8 | 00:03 |
| shogun-notifier- | shogun: Additional features for the interactive gp regression demo (issue #948) | 00:03 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * d906aa9 / examples/undocumented/python_modular/graphical/interactive_gp_demo.py: https://github.com/shogun-toolbox/shogun/commit/d906aa956e412fe64fbfaca5a9c56b74cf754af9 | 00:03 |
| shogun-notifier- | shogun: Merge pull request #1082 from goldbug/develop-gp-example | 00:03 |
| shogun-notifier- | shogun: | 00:03 |
| shogun-notifier- | shogun: Additional features for the interactive gp regression demo (issue #948) | 00:03 |
| @sonney2k | dvalcarce, hmmh I am on classification branch | 00:03 |
| @sonney2k | dvalcarce, which method then? | 00:03 |
| @sonney2k | https://github.com/dvalcarce/shogun-web/branches | 00:03 |
| @sonney2k | it says last updated 13 days ago? | 00:04 |
| dvalcarce | 13 days ago? hmm... | 00:04 |
| dvalcarce | sonney2k, try now | 00:06 |
| @sonney2k | dvalcarce, ok now I see the colorbar | 00:07 |
| @sonney2k | though it still needs some numbers :D | 00:08 |
| @sonney2k | but no contour | 00:08 |
| dvalcarce | sonney2k, I will add the numbers | 00:09 |
| @sonney2k | dvalcarce, hmmh multiclass is broken now? | 00:09 |
| dvalcarce | sonney2k, multiclass works fine to me | 00:10 |
| @sonney2k | weird | 00:11 |
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| @sonney2k | if you have time please do a real contour like in http://www.idlcoyote.com/tips/contour_user_selected.jpg | 00:11 |
| dvalcarce | sonney2k, do you receive some error message? | 00:12 |
| @sonney2k | I don't know how hard this is with d3 / or whether anyone has done it | 00:12 |
| @sonney2k | dvalcarce, no the result is just crap | 00:12 |
| dvalcarce | sonney2k, browser? | 00:13 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7066939 | 00:13 |
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| dvalcarce | sonney2k, binary classification has the same contour plotting as the perceptron | 00:13 |
| @lisitsyn | sonney2k: where did you get that pic!!!!! :D | 00:13 |
| @lisitsyn | that's windows 95 for real! | 00:13 |
| dvalcarce | sonney2k, but perceptron countor plotting is ugly: just parallel lines | 00:14 |
| @sonney2k | dvalcarce, https://dl.dropboxusercontent.com/u/31480471/bad-mc.png | 00:14 |
| @sonney2k | lisitsyn, google contour plot | 00:14 |
| @sonney2k | dvalcarce, yes colors & lines for 0 / 1 / or so | 00:15 |
| @sonney2k | without knowing the f(x)=0 contour line it is not clear where the decision boundary really is | 00:16 |
| @sonney2k | alright people I have to sleep | 00:16 |
| @sonney2k | lisitsyn, please fixzebugz | 00:16 |
| @lisitsyn | sonney2k: which? | 00:16 |
| @sonney2k | FA | 00:16 |
| @lisitsyn | sonney2k: already? | 00:17 |
| dvalcarce | sonney2k, don't you see something like https://github.com/shogun-toolbox/shogun-web/pull/27#issuecomment-17746979 ? | 00:17 |
| shogun-buildbot | build #796 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/796 blamelist: cameron <cameronjml2@gmail.com> | 00:17 |
| @sonney2k | dvalcarce, yes but what am I seeing there? | 00:17 |
| @sonney2k | I meant black contour lines | 00:18 |
| @sonney2k | and below that the *smooth* colors | 00:18 |
| dvalcarce | sonney2k, black? | 00:18 |
| dvalcarce | sonney2k, I have to find how to do that in D3js then | 00:19 |
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| dvalcarce | sonney2k, I use conrac.js library for contour plotting, I don't think I can add black contour lines without changing all plotting | 00:21 |
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| @sonney2k | pickle27, dvalcarce, van51 btw which timezone are you in? | 00:24 |
| pickle27 | sonney2k: Canada - EDT | 00:24 |
| * gsomix is tired. *bad, bad git* :( | 00:24 | |
| dvalcarce | sonney2k, Madrid CET | 00:24 |
| van51 | sonney2k: athens or UTC+2 | 00:25 |
| gsomix | nite | 00:25 |
| @sonney2k | ok so we should not have cheng in too :D | 00:25 |
| @sonney2k | lisitsyn, recall last year when we had our monthly meetings and it was already late at night for cheng while chris had to get up at 7 or so? | 00:26 |
| @lisitsyn | sonney2k: haha yes | 00:26 |
| @lisitsyn | we were basically | 00:26 |
| @lisitsyn | -8 to +8 | 00:26 |
| @sonney2k | australia vs new york (city) | 00:26 |
| @sonney2k | we could totally screw that with olvier (california) | 00:27 |
| van51 | I think I would mind more the getting up at 7 :p | 00:27 |
| @sonney2k | and cheng | 00:27 |
| @sonney2k | van51, it is 00:28 here | 00:28 |
| @sonney2k | so 18:28 at your place | 00:28 |
| @sonney2k | 6 hrs | 00:28 |
| @lisitsyn | lucky you 02:28 here | 00:28 |
| @sonney2k | if we had a meeting at 13:00 | 00:29 |
| @sonney2k | it would indeed be 7 am for you | 00:29 |
| van51 | no, 00:28 sounds fine | 00:29 |
| van51 | :p | 00:29 |
| @wiking | sonney2k: how should a load and save method look like for a preprocessor | 00:29 |
| @sonney2k | not when you have to get up in 5 hours :D | 00:30 |
| @sonney2k | wiking, a what? | 00:30 |
| @sonney2k | I guess that is obsolete | 00:30 |
| gsomix | sonney2k, sorry for another PR. I have problems with "amending". | 00:30 |
| @wiking | sonney2k: is it? | 00:30 |
| @wiking | sonney2k: somehow i need to serialize some parameters of the preprocessor | 00:30 |
| @sonney2k | gsomix, jsut do git reset --soft <version> | 00:30 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7067186 | 00:31 |
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| @sonney2k | and then git commit everything at once | 00:31 |
| @sonney2k | and push --force | 00:31 |
| @sonney2k | wiking, but then SG_ADD | 00:31 |
| @wiking | sonney2k: and then save/load functions will be handled automagically? :) | 00:31 |
| @sonney2k | dvalcarce, maybe you can add contour lines on top? I have no clue what conrac.js is | 00:32 |
| @sonney2k | wiking, what? | 00:32 |
| shogun-buildbot | build #1091 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1091 blamelist: Viktor Gal <viktor.gal@maeth.com> | 00:32 |
| @sonney2k | load and save should die | 00:32 |
| @wiking | sonney2k: ok i'll remove | 00:33 |
| gsomix | sonney2k, hm, ok. I'll try it next time. :( | 00:33 |
| @sonney2k | lisitsyn, I like gsomix' label factory patch | 00:35 |
| @lisitsyn | sonney2k: no I like it too, just naming | 00:36 |
| @lisitsyn | it is not factory | 00:36 |
| @sonney2k | what else then? | 00:36 |
| @lisitsyn | sonney2k: factory creates objects | 00:36 |
| shogun-buildbot | build #797 of cyg1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/797 | 00:37 |
| @sonney2k | lisitsyn, LabelUtils? | 00:39 |
| * sonney2k Zzzzz.... | 00:39 | |
| @lisitsyn | sonney2k: utils is better indeed | 00:39 |
| gsomix | good night, finally | 00:39 |
| @sonney2k | gsomix, ok then | 00:39 |
| @sonney2k | LabelUtils | 00:39 |
| gsomix | sonney2k, ok. | 00:39 |
| @sonney2k | zzzzz.... | 00:39 |
| @lisitsyn | LabelsUtils::cast_to_structured | 00:40 |
| @lisitsyn | I'd call it so | 00:40 |
| @lisitsyn | gsomix: ^ | 00:40 |
| @lisitsyn | I like short names but Utils doesn't tell the user what it does | 00:40 |
| @wiking | why do i get segfault for sg_adding a SGVector? :) | 00:46 |
| @wiking | ok just another make clean && make story | 00:48 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7067343 | 00:48 |
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| van51 | sonney2k: are you gone? | 00:49 |
| @wiking | lisitsyn: apply your magic to unit test compilation as well! :) | 00:57 |
| @lisitsyn | wiking: what magic? | 00:57 |
| shogun-notifier- | shogun: Viktor Gal :develop * 54ea3ad / / (4 files): https://github.com/shogun-toolbox/shogun/commit/54ea3ad40ecd4ac5ce1704d783d1378eeea5cb33 | 00:57 |
| shogun-notifier- | shogun: Refactor RescaleFeatures and fix PruneVarSubMean::cleanup RescaleFeatures should be used with init() in order to aquire the min and range values for each vector. PruneVarSubMean::cleanup() did not set initialized to false | 00:57 |
| @wiking | lisitsyn: to hide the actual compilation command | 00:58 |
| @lisitsyn | ahh | 00:58 |
| @lisitsyn | yeah tomorrow | 00:58 |
| @wiking | ok so now the rescalefeature should actually work :P | 00:58 |
| @wiking | cool | 00:58 |
| @lisitsyn | wiking: are you still using clang_complete? | 00:58 |
| @lisitsyn | I just updated and I noticed it is faster now | 00:59 |
| @wiking | it's cool that we have now already 86 tests in unit tests | 00:59 |
| @wiking | lisitsyn: in a way yes.... | 00:59 |
| shogun-buildbot | build #1092 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1092 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Sergey Lisitsyn <lisitsyn.s.o@gmail.com>, cameron <cameronjml2@gmail.com> | 01:00 |
| @lisitsyn | wiking: whooop | 01:04 |
| @lisitsyn | no more ctags | 01:04 |
| @lisitsyn | wiking: try jumping | 01:05 |
| @lisitsyn | Ctrl + ] here | 01:05 |
| @lisitsyn | finally | 01:05 |
| pickle27 | hey is there any docs on how to build the test suit for unit tests? | 01:05 |
| @lisitsyn | pickle27: build unit tests or what? | 01:06 |
| pickle27 | lisitsyn: yeah I am trying to build and run the unit tests to see of the new one I'm working on works | 01:07 |
| @lisitsyn | pickle27: make in shogun/tests/unit | 01:07 |
| @lisitsyn | does it for you | 01:07 |
| @wiking | lisitsyn: didn't hide swig compilation | 01:07 |
| @lisitsyn | wiking: yeah I know | 01:07 |
| @lisitsyn | wiking: but hey I said jumping works | 01:08 |
| @lisitsyn | :D | 01:08 |
| pickle27 | lisitsyn: yes but what version of gtest and gmock because the build is failing | 01:08 |
| @lisitsyn | pickle27: error? | 01:08 |
| pickle27 | lisitsyn: gtest/test/gtest_unittest.cc:69:36: fatal error: src/gtest-internal-inl.h: No such file or directory | 01:08 |
| pickle27 | lisitsyn: I just downloaded gtest and gmock and copied them to /usr/src | 01:09 |
| @lisitsyn | pickle27: did you reconfigure after that? | 01:09 |
| pickle27 | yup | 01:09 |
| pickle27 | lisitsyn: they both showed up as recognized after ./config | 01:10 |
| @lisitsyn | pickle27: so /usr/src/gtest/src/gtest-internal-inl.h exists | 01:10 |
| @lisitsyn | ? | 01:10 |
| pickle27 | lisitsyn: yes | 01:11 |
| @lisitsyn | pickle27: no idea then :D | 01:12 |
| @lisitsyn | pickle27: just check they are included | 01:12 |
| @lisitsyn | pickle27: shogun/src/.config should have | 01:12 |
| @lisitsyn | GTEST_DIR | 01:12 |
| @lisitsyn | GMOCK_DIR | 01:12 |
| @lisitsyn | set to /usr/src/gtest | 01:13 |
| @lisitsyn | and /usr/src/gmock | 01:13 |
| pickle27 | lisitsyn: yeah thats what they are set to | 01:13 |
| @lisitsyn | pickle27: sorry I am powering off just like sonney2k now | 01:15 |
| pickle27 | lisitsyn: no worries I'll try and figure this out! | 01:15 |
| @lisitsyn | pickle27: this error means one thing - include paths are not here | 01:16 |
| pickle27 | lisitsyn: yeah I'm trying a rebuild now and I'll take another look at exactly what it was building] | 01:16 |
| pickle27 | lisitsyn: looks like it might be okay now | 01:17 |
| @lisitsyn | oh these lovely side effects | 01:17 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * e885cc8 / src/shogun/lib/tapkee/ (4 files): https://github.com/shogun-toolbox/shogun/commit/e885cc84c9efe6b269a006aacf0ec1318656e2f4 | 01:21 |
| shogun-notifier- | shogun: Fixes for tapkee | 01:21 |
| shogun-notifier- | shogun: | 01:21 |
| shogun-notifier- | shogun: - Proper ratio limits for landmark methods | 01:21 |
| shogun-notifier- | shogun: - Fixed crasher in exact t-SNE | 01:21 |
| @wiking | lisitsyn: went already to sleep? :) | 01:24 |
| @lisitsyn | wiking: on the way | 01:24 |
| @lisitsyn | wiking: what's up? | 01:25 |
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| travis-ci | [travis-ci] it's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7067984 | 01:25 |
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| shogun-buildbot | build #799 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/799 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 01:25 |
| @wiking | lisitsyn: decision tree implementation | 01:26 |
| @wiking | anybody started that? | 01:26 |
| @lisitsyn | wiking: monica may be | 01:27 |
| @lisitsyn | she wanted to start with id3 | 01:28 |
| @lisitsyn | wiking: we rather need RF actually | 01:28 |
| @lisitsyn | one tree is useless | 01:28 |
| @wiking | lisitsyn: i know.... | 01:30 |
| @wiking | lisitsyn: that's what i wanted but stupid librf supports only binary classification which is kind of stupid | 01:31 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7068017 | 01:41 |
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| shogun-buildbot | build #1093 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1093 blamelist: Viktor Gal <viktor.gal@maeth.com> | 01:44 |
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| travis-ci | [travis-ci] it's van51's turn to pay the next round of drinks for the massacre he caused in van51/shogun: http://travis-ci.org/van51/shogun/builds/7069772 | 01:53 |
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| van51 | hmm | 01:58 |
| van51 | how do I turn that off? | 01:58 |
| van51 | :) | 01:59 |
| pickle27 | lisitsyn: aaah all I needed was a make clean... | 02:04 |
| pickle27 | lisitsyn: oh nvm problem persists | 02:04 |
| pickle27 | lisitsyn: ahhh now I got it running silly mistake on my part | 02:06 |
| shogun-buildbot | build #1094 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1094 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 02:11 |
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| shogun-buildbot | build #391 of nightly_default is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_default/builds/391 | 04:17 |
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| @sonney2k | lisitsyn, then we should not call it LabelUtils btw sth else | 07:06 |
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| gsomix | sonney2k, mb sth like LabelsCast::to_binary? | 08:33 |
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| gsomix | ok, good morning finally | 09:33 |
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| van51 | hello, since last night whenever I'm compiling I'm getting " a /usr/lib/gcc/i686-linux-gnu/4.6/include/emmintrin.h:32:3: error: #error "SSE2 instruction set not enabled" " message | 11:24 |
| van51 | anyone knows what's that about? | 11:24 |
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| goldbug | this might help | 11:53 |
| goldbug | http://stackoverflow.com/questions/16410149/error-sse2-instruction-set-not-enabled-when-including-emmintrin-h | 11:53 |
| van51 | goldbug: thanks, I had seen it.. and I think I have set the flags it says, but I am still getting this error | 12:11 |
| goldbug | maybe reinstall gcc and cmake | 12:13 |
| van51 | actually I was building with make | 12:14 |
| goldbug | van51: can't help then, didn't have that problem at all, sorry | 12:19 |
| van51 | goldbug: no worries, thanks for your time anyway | 12:19 |
| @lisitsyn | van51: which file it is? | 12:23 |
| @lisitsyn | I mean is it shogun? | 12:24 |
| van51 | lisitsyn: yea | 12:24 |
| @lisitsyn | van51: where emmintrin.h is included? | 12:28 |
| van51 | lisitsyn: yea, the error comes from that file | 12:29 |
| @lisitsyn | van51: and it must be included somewhere else | 12:30 |
| van51 | what do you mean? | 12:32 |
| goldbug | lisitsyn: Hi, just wondering whether shogun has a periodic kernel? | 12:40 |
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| @sonney2k | lisitsyn, what is you name preference then? I am totally fine with factory btw... | 13:04 |
| @wiking | van51: is that produced by ./configure or make? | 13:05 |
| van51 | wiking: by make | 13:06 |
| @wiking | van51: woah | 13:06 |
| van51 | it spams it in the beginning | 13:06 |
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| shogun-notifier- | shogun: Evgeniy Andreev :develop * 2ab348a / / (60 files): https://github.com/shogun-toolbox/shogun/commit/2ab348a759ec59698f804665deaba80298873150 | 13:06 |
| shogun-notifier- | shogun: Issue 1058: added factory for labels | 13:06 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 90a5fc4 / / (60 files): https://github.com/shogun-toolbox/shogun/commit/90a5fc4c32a171a38c4ad21bc1f98458800aca85 | 13:06 |
| shogun-notifier- | shogun: Merge pull request #1083 from gsomix/feature/issue1058 | 13:06 |
| shogun-notifier- | shogun: | 13:06 |
| shogun-notifier- | shogun: added factory for labels | 13:06 |
| @wiking | can you copy-paste the context plz | 13:06 |
| van51 | wiking: what do you mean by context? :) | 13:07 |
| @wiking | van51: well like 2 lines before this error | 13:08 |
| van51 | it has | 13:08 |
| van51 | make -C shogun | 13:08 |
| van51 | make[1]: Entering directory `/home/van51/shogun/src/shogun' | 13:08 |
| van51 | Generating dependencies | 13:08 |
| @wiking | mmmmhm | 13:09 |
| van51 | and then it spams it for a while | 13:09 |
| @wiking | van51: can you send me your configure.log ? | 13:09 |
| @wiking | van51: wiking@maeth.com | 13:09 |
| @wiking | thnx | 13:09 |
| gsomix | sonney2k, oh... it was WIP. :( | 13:09 |
| shogun-buildbot | build #1152 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1152 blamelist: Soeren Sonnenburg <sonne@debian.org> | 13:10 |
| van51 | wiking: sent | 13:11 |
| @wiking | van51: and after this basically you do a make and it complains that error: #error "SSE2 instruction set not enabled" " messag | 13:14 |
| van51 | wiking: exactly | 13:14 |
| @wiking | shit | 13:14 |
| @wiking | i wonder why | 13:15 |
| van51 | wiking: dunno, but it is working fine on another machine I have | 13:15 |
| van51 | so it has something to do with the configuration on my laptop | 13:15 |
| van51 | the weirder thing is that it suddenly started last night :S | 13:15 |
| shogun-buildbot | build #1151 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1151 blamelist: Evgeniy Andreev <gsomix@gmail.com> | 13:16 |
| @wiking | van51: i guess it's because you upgraded to HEAD of the repo | 13:17 |
| @sonney2k | gsomix, you label everything WIP so how could I figure this out? | 13:18 |
| @wiking | van51: can u paste on file's compilation line.... ? | 13:19 |
| @wiking | lisitsyn: how do i turn off this 'hide compilation mode' | 13:19 |
| gsomix | sonney2k, hm. I usually say when it's ready to merge... | 13:23 |
| gsomix | sonney2k, sorry. I'll try to be more careful with WIP tag. | 13:23 |
| van51 | wiking: if you mean the line of the error, then there is nothing more to the output | 13:24 |
| @wiking | lisitsyn: "We just can't be fucked to implement C11 support, and variadic templates were just too hard to implement in a year. (But ohmygosh we turned "^" into a reference-counted pointer operator. Oh, and what's a reference cycle?) " :D | 13:26 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7077038 | 13:27 |
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| van51 | wiking: after a while this error message stops and it does a "( find . -name "*.i" | cut -c 3- ; find ../shogun/ -name "*.h" ... " | 13:27 |
| van51 | it re-enters the directory | 13:27 |
| van51 | and says that it is compiling | 13:27 |
| van51 | but if I run any test after that, it fails with a segfault | 13:27 |
| @sonney2k | gsomix, well now it is too late fix the rest ASAP | 13:27 |
| gsomix | sonney2k, aha, I'm fixing now. | 13:29 |
| gsomix | sonney2k, btw, what do you think about "LabelsCast" naming? | 13:31 |
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| @iglesiasg | greetings people | 13:55 |
| @iglesiasg | I am finally back | 13:55 |
| gsomix | iglesiasg, \o/ | 13:56 |
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| @iglesiasg | gsomix: let met ask you | 14:00 |
| @iglesiasg | why is it necessary to add gsomix the declaractions class CLabels, CBinaryLabels, etc in LabelsFactory.h | 14:00 |
| @iglesiasg | I never really understand it | 14:00 |
| @iglesiasg | although I think it is required | 14:01 |
| gsomix | iglesiasg, it's just predeclaration. I have included LabelsFactory.h in Labels.h - at this moment BinaryLabels and etc. are not really defined. | 14:03 |
| gsomix | iglesiasg, btw, it seems, that CLabels declaration is not necessary. | 14:03 |
| gsomix | iglesiasg, ah, nope. It's needed too. | 14:07 |
| @iglesiasg | gsomix: aham, I see it. I didn't notice BinaryLabels.h, etc are not included. | 14:08 |
| @iglesiasg | gsomix: I think there is something related to SWIG that makes you have to do it even if you include them | 14:09 |
| gsomix | sonney2k, ok, now it's really WIP. | 14:32 |
| gsomix | sonney2k, once it is ready, I will write to you and will remove tag "WIP". | 14:33 |
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| gsomix | sonney2k, bit.ly/W6drdM | 15:44 |
| gsomix | sonney2k, I mean PR is good to merge now. :) | 15:44 |
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| abinash | Hello, please someone help me in getting to know about maximum likelihood II framework for Gaussian process regression? | 16:26 |
| @iglesiasg | abinash: hi! | 16:32 |
| @iglesiasg | are you stuck in any part of it? | 16:32 |
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| abinash | iglesiasg: actually I am trying to work on the issue #1080 | 16:33 |
| abinash | I am unable to understand what is actually maximum likelihood II framework for Gaussian Process Regression | 16:34 |
| abinash | iglesiasg: please help me on this | 16:38 |
| @iglesiasg | abinash: have you read in any book, paper or other reference about this? | 16:41 |
| abinash | iglesiasg: no, but I would prefer to read | 16:41 |
| @iglesiasg | abinash: I guess it is a good idea to check a reference in order to understand it ;) | 16:42 |
| abinash | iglesiasg: ok, I would do that. | 16:42 |
| @iglesiasg | votjakovr: according to the issue votjakovr is taking a look at that, maybe he can suggest a reference | 16:43 |
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| abinash | votjakovr: can you suggest me any reference for maximum likelihood II framework for Gaussian process regression | 16:55 |
| votjakovr | abinash: Hi, ML2 framework make it possible to perform gradient descent to select the best hyperparameters. I think this http://www.youtube.com/watch?v=1CFof6hU3cI video lecture will be useful for introduction in ML2. | 17:03 |
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| @lisitsyn | re | 18:12 |
| @lisitsyn | wiking: why? | 18:12 |
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| shogun-notifier- | shogun: Evgeniy Andreev :develop * 5d991aa / / (28 files): https://github.com/shogun-toolbox/shogun/commit/5d991aa9beada440888e45b5651efa810eccc3aa | 19:27 |
| shogun-notifier- | shogun: fixed examples and tests have been broken by PR#1083 | 19:27 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * 67690b8 / / (28 files): https://github.com/shogun-toolbox/shogun/commit/67690b8ab2da441c754c15f8a64c9f118a59ace2 | 19:27 |
| shogun-notifier- | shogun: Merge pull request #1084 from gsomix/feature/issue1058 | 19:27 |
| shogun-notifier- | shogun: | 19:27 |
| shogun-notifier- | shogun: Fixed examples and tests have been broken by PR#1083 | 19:28 |
| shogun-buildbot | build #800 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/800 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 19:34 |
| shogun-buildbot | build #1153 of deb1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1153 | 19:41 |
| gsomix | lisitsyn, thanks! | 19:42 |
| shogun-buildbot | build #801 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/801 blamelist: Evgeniy Andreev <gsomix@gmail.com> | 19:43 |
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| travis-ci | [travis-ci] it's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7083225 | 19:45 |
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| shogun-buildbot | build #1095 of deb3 - modular_interfaces is complete: Failure [failed compile java_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1095 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 20:06 |
| shogun-buildbot | build #1096 of deb3 - modular_interfaces is complete: Failure [failed compile java_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1096 blamelist: Evgeniy Andreev <gsomix@gmail.com> | 20:09 |
| gsomix | shogun-buildbot, hmm... | 20:13 |
| gsomix | mkay | 20:13 |
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| @sonney2k | wiking, why is SFMT included in swig stuff? | 21:12 |
| @sonney2k | no wait it is just about doxygen | 21:13 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 4ad0e6f / src/interfaces/modular/Features.i,src/shogun/labels/LabelsFactory.h: https://github.com/shogun-toolbox/shogun/commit/4ad0e6fe994719635b206bf08fb92cf91657d9d4 | 21:38 |
| shogun-notifier- | shogun: derive labelfactory from sgobject | 21:38 |
| shogun-buildbot | build #802 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/802 blamelist: Soeren Sonnenburg <sonne@debian.org> | 21:46 |
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| gsomix_ | sonney2k, thanks! | 21:56 |
| -!- gsomix_ is now known as gsomix | 21:56 | |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7085743 | 21:57 |
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| @lisitsyn | sonney2k: are you under eclipse now? | 21:59 |
| @lisitsyn | I mean in general do you use eclipse now? | 22:00 |
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| @lisitsyn | I just wanted to say clang_complete has made a few steps to cover most things | 22:00 |
| @lisitsyn | IDE covers | 22:00 |
| @sonney2k | lisitsyn, where do I get it? | 22:04 |
| @sonney2k | I miss vim keys... | 22:04 |
| @lisitsyn | sonney2k: ok do you know what pathogen is? | 22:04 |
| @sonney2k | no | 22:08 |
| @lisitsyn | sonney2k: https://github.com/tpope/vim-pathogen | 22:10 |
| @lisitsyn | sonney2k: check installation | 22:11 |
| @lisitsyn | once you are done | 22:11 |
| @lisitsyn | just go to ~/.vim/bundle | 22:11 |
| @lisitsyn | and git clone git://github.com/Rip-Rip/clang_complete.git | 22:12 |
| @sonney2k | and then? | 22:15 |
| @lisitsyn | sonney2k: should work now | 22:15 |
| @lisitsyn | sonney2k: just try to jump to any definition | 22:15 |
| @lisitsyn | Ctrl + ] here | 22:15 |
| @sonney2k | says no tag found | 22:15 |
| @lisitsyn | sonney2k: hmm okay | 22:16 |
| @lisitsyn | sonney2k: what happens when you do | 22:16 |
| @lisitsyn | someobject. | 22:16 |
| @lisitsyn | I mean some real object | 22:16 |
| @lisitsyn | oh | 22:16 |
| @lisitsyn | sonney2k: did you add anything related to pathogen to your .vimrc? | 22:17 |
| @lisitsyn | sonney2k: add 'execute pathogen#infect()' to the very beginning if you didn't | 22:18 |
| @sonney2k | hmmh nothing | 22:21 |
| @sonney2k | there must be mroe settings | 22:21 |
| @sonney2k | more | 22:21 |
| @lisitsyn | sonney2k: yeah a few more but I thought this should work already | 22:22 |
| @lisitsyn | sonney2k: ahh one more | 22:22 |
| @lisitsyn | do you have libclang installed? | 22:23 |
| @sonney2k | of course not | 22:24 |
| @lisitsyn | sonney2k: | 22:24 |
| @lisitsyn | 45 let g:clang_close_preview = 1 | 22:24 |
| @lisitsyn | 46 let g:clang_complete_auto = 1 | 22:24 |
| @lisitsyn | 47 let g:clang_auto_select = 0 | 22:24 |
| @lisitsyn | 48 let g:clang_snippets = 0 | 22:24 |
| @lisitsyn | 49 let g:clang_use_library = 1 | 22:24 |
| @lisitsyn | 50 let g:clang_debug = 0 | 22:24 |
| @lisitsyn | from my vimrc | 22:24 |
| @lisitsyn | btw it is damn slow in tapkee due to a lot of headers | 22:25 |
| @lisitsyn | and fast with shogun | 22:25 |
| @lisitsyn | sonney2k: ohhh I think I know | 22:26 |
| shogun-buildbot | build #1097 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1097 blamelist: Soeren Sonnenburg <sonne@debian.org> | 22:26 |
| @sonney2k | lisitsyn, do I need to set paths somehow? | 22:26 |
| @lisitsyn | sonney2k: yes yes | 22:26 |
| @sonney2k | still nothing | 22:26 |
| @lisitsyn | sonney2k: I just got it jumps to my local install of shogun | 22:26 |
| @lisitsyn | sonney2k: add .clang_complete file | 22:26 |
| @lisitsyn | in the dir you run it | 22:26 |
| @lisitsyn | shogun/src I guess | 22:26 |
| @lisitsyn | then add -I./shogun | 22:26 |
| @sonney2k | lisitsyn, shouldn't we add this to shogun/src ? | 22:27 |
| @lisitsyn | ahh wait | 22:27 |
| @lisitsyn | i am wrong | 22:27 |
| @lisitsyn | -I. | 22:27 |
| @lisitsyn | that's what should be in shogun/src | 22:27 |
| @lisitsyn | sonney2k: will commit it in a minute | 22:28 |
| @sonney2k | hmmhh doesn't work :/ | 22:28 |
| @sonney2k | can I somehow debug? | 22:28 |
| @lisitsyn | sonney2k: any error or just nothing? | 22:28 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * cd6de7c / src/.clang_complete: https://github.com/shogun-toolbox/shogun/commit/cd6de7c8f144b6e6b621887c96a88910fa02a48e | 22:29 |
| shogun-notifier- | shogun: Added clang complete file | 22:29 |
| @sonney2k | just nothing | 22:29 |
| @lisitsyn | sonney2k: Ctrl + ]? | 22:29 |
| @sonney2k | no idea what to do | 22:29 |
| @sonney2k | cstag: tag not found | 22:30 |
| @lisitsyn | argh | 22:30 |
| @lisitsyn | sonney2k: :scriptnames | 22:30 |
| @lisitsyn | sonney2k: does it contain clang_complete? | 22:30 |
| @sonney2k | 29: ~/.vim/bundle/clang_complete/plugin/clang_complete.vim | 22:31 |
| @sonney2k | yes | 22:31 |
| @lisitsyn | sonney2k: so you run your vim in shogun/src | 22:31 |
| @lisitsyn | right? | 22:32 |
| @lisitsyn | and you have that .clang_complete file I just pushed | 22:32 |
| @lisitsyn | that contains -I. | 22:32 |
| @sonney2k | yes | 22:35 |
| @lisitsyn | sonney2k: and you pushed these settings from my vimrc | 22:36 |
| @lisitsyn | too? | 22:36 |
| @sonney2k | lisitsyn, yes | 22:36 |
| @lisitsyn | damn | 22:37 |
| @lisitsyn | sonney2k: trying to find any reason | 22:40 |
| shogun-buildbot | build #803 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/803 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 22:42 |
| @lisitsyn | sonney2k: so neither . completion nor jump work? | 22:43 |
| @sonney2k | lisitsyn, exactly | 22:44 |
| @sonney2k | finally an error | 22:47 |
| @sonney2k | Loading libclang failed, completion won't be available | 22:47 |
| @sonney2k | Consider setting g:clang_library_path | 22:47 |
| @sonney2k | -rw-r--r-- 1 root root 8.3M Mar 31 11:04 /usr/lib/libclang.so.1 | 22:48 |
| @lisitsyn | sonney2k: ohh that's better | 22:48 |
| @lisitsyn | at least we know an error | 22:48 |
| @sonney2k | I am installing libclang-dev | 22:48 |
| @sonney2k | yes | 22:49 |
| @sonney2k | something works | 22:49 |
| -!- travis-ci [~travis-ci@ec2-23-20-59-228.compute-1.amazonaws.com] has joined #shogun | 22:49 | |
| travis-ci | [travis-ci] it's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7086818 | 22:49 |
| -!- travis-ci [~travis-ci@ec2-23-20-59-228.compute-1.amazonaws.com] has left #shogun [] | 22:49 | |
| @lisitsyn | sonney2k: nice | 22:50 |
| @sonney2k | I need ctrl+space though | 22:50 |
| @sonney2k | for autocomplete | 22:50 |
| @lisitsyn | sonney2k: ohh again | 22:50 |
| @lisitsyn | :D | 22:50 |
| @sonney2k | any idea? | 22:50 |
| @lisitsyn | sonney2k: I did that once for you | 22:50 |
| @lisitsyn | sonney2k: http://www.shogun-toolbox.org/irclogs/%23shogun.2012-05-21.log.html | 22:51 |
| @lisitsyn | sonney2k: search by ctrl+space | 22:51 |
| @lisitsyn | sonney2k: so patch clang_complete.vim | 22:52 |
| @lisitsyn | then add that imap <Nul> stuff | 22:52 |
| @lisitsyn | to .vimrc | 22:52 |
| @lisitsyn | sonney2k: line 147 now | 22:53 |
| @lisitsyn | sonney2k: works here | 22:54 |
| @sonney2k | yeah works | 22:57 |
| @lisitsyn | sonney2k: anything else? | 22:57 |
| @lisitsyn | :D | 22:57 |
| @sonney2k | lisitsyn, yeah fix the build | 22:57 |
| @lisitsyn | sonney2k: vim related? | 22:57 |
| @lisitsyn | :D | 22:57 |
| @sonney2k | converter_factoranalysis_modular.py setting 1/1 ERROR | 22:57 |
| @lisitsyn | still? | 22:58 |
| @lisitsyn | bah.. | 22:58 |
| @lisitsyn | didn't know | 22:58 |
| @lisitsyn | sonney2k: what is c? | 22:58 |
| @lisitsyn | in output | 22:58 |
| @lisitsyn | -T +c | 22:58 |
| @sonney2k | evaluation_multiclassovrevaluation_modular.py setting 1/1 ERROR | 22:58 |
| @sonney2k | too hmmhh | 22:58 |
| @sonney2k | lisitsyn, must have been some exception | 22:59 |
| @lisitsyn | sonney2k: okay lets see if that happens again | 23:02 |
| @lisitsyn | ahh happened two times already | 23:02 |
| @lisitsyn | sonney2k: could you check what does it return on your machine? | 23:03 |
| * sonney2k compiling | 23:08 | |
| @lisitsyn | sonney2k: is that ok to return boolean at all? | 23:18 |
| @lisitsyn | well I do that in multidimensional scaling already | 23:18 |
| @lisitsyn | I observe nothing random | 23:19 |
| @lisitsyn | in both examples | 23:19 |
| @sonney2k | something is weird | 23:20 |
| @sonney2k | one returns a boolean | 23:20 |
| @sonney2k | one returns DenseFeatures | 23:20 |
| @lisitsyn | sonney2k: what ex returns features? | 23:22 |
| @sonney2k | lisitsyn, you changed the test | 23:23 |
| @sonney2k | return covdet > 0 | 23:23 |
| @lisitsyn | but didn't change data | 23:23 |
| @lisitsyn | hahaha | 23:23 |
| shogun-buildbot | build #1098 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1098 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 23:25 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * b491e83 / data: https://github.com/shogun-toolbox/shogun/commit/b491e83ab095a782dc18091a55e649fb6d280a9a | 23:29 |
| shogun-notifier- | shogun: Updated data submodule reference | 23:29 |
| -!- vgorbati [d4029f22@gateway/web/freenode/ip.212.2.159.34] has joined #shogun | 23:32 | |
| vgorbati | lisitsyn: hi, here? | 23:33 |
| @lisitsyn | vgorbati: hey | 23:33 |
| @lisitsyn | yes | 23:33 |
| vgorbati | lisitsyn: have you seen my e-mail? | 23:33 |
| @lisitsyn | yeah sure, didn't manage to write an answer yet though | 23:34 |
| @lisitsyn | vgorbati: what do I think is that it is nice you pointed out a possibility to speed it up | 23:34 |
| @lisitsyn | but I am unsure it is worth the deal | 23:34 |
| shogun-buildbot | build #804 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/804 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 23:34 |
| vgorbati | lisitsyn: so, implement without it for now? | 23:35 |
| @lisitsyn | vgorbati: yeah lets just do simplest | 23:35 |
| vgorbati | lisitsyn: ok, less work for me:) But the resulting method will be quite slow I think) | 23:35 |
| @lisitsyn | vgorbati: oh well all DR methods are quite slow | 23:36 |
| vgorbati | lisitsyn: just curious: does the idea I supposed at least make some sense? | 23:36 |
| @lisitsyn | vgorbati: I didn't find any error so probably yes | 23:38 |
| @lisitsyn | but again lets go simplest | 23:38 |
| vgorbati | lisitsyn: ok, maybe I will convince you later:) | 23:39 |
| @lisitsyn | vgorbati: there is a bunch of more useful methods :) | 23:39 |
| vgorbati | lisitsyn: well, at least wikipedia says that manifold sculpting gives better results for some cases | 23:40 |
| @lisitsyn | vgorbati: ha! each method has a dataset it works the best among others | 23:41 |
| @lisitsyn | vgorbati: LTSA is the ideal algorithm for swissroll | 23:42 |
| vgorbati | lisitsyn: :) PCA is good for a straight lines I guess. Unfortunately, real datasets are not like this) | 23:42 |
| @lisitsyn | heh but PCA is relevant still | 23:43 |
| -!- pickle27 [~kevin@rcv3-lab-pc.ee.queensu.ca] has joined #shogun | 23:43 | |
| vgorbati | lisitsyn: I guess it is like a first-try-method - if it succeeds, then there's no need to invent bycicles) | 23:44 |
| @lisitsyn | vgorbati: you mean PCA? | 23:45 |
| vgorbati | lisitsyn: yes | 23:45 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 42ca7de / data,tests/integration/python_modular/tester.py: https://github.com/shogun-toolbox/shogun/commit/42ca7de15c98c26cf75ad10e5b56109292058d69 | 23:45 |
| shogun-notifier- | shogun: fix tester and require new mcroceval data | 23:45 |
| @lisitsyn | yeah some kind of - you just drop some features and project others | 23:45 |
| @sonney2k | vgorbati, usually the simplest thing is just enough in practise | 23:46 |
| @lisitsyn | vgorbati: and it is damn fast | 23:46 |
| @lisitsyn | and stable | 23:46 |
| @sonney2k | only scientists want to tell you that it is not | 23:46 |
| @sonney2k | but they have to publish papers | 23:46 |
| @lisitsyn | haha | 23:46 |
| @lisitsyn | sonney2k: I just wonder | 23:46 |
| @sonney2k | and a paper on PCA yet again is well *yawn* | 23:46 |
| @lisitsyn | had you been thinking so finishing your phd? | 23:47 |
| @lisitsyn | and more important when you started working on it? | 23:47 |
| gsomix | good night, guys | 23:48 |
| @lisitsyn | nite | 23:48 |
| @sonney2k | lisitsyn, of course not | 23:53 |
| @sonney2k | but when you grow old you learn how papers are made | 23:53 |
| @sonney2k | what gets you in a conference / a paper accepted and what not | 23:53 |
| @sonney2k | the simple good working ideas never made | 23:53 |
| @sonney2k | it | 23:53 |
| @lisitsyn | sonney2k: do you realize you get us old :D | 23:53 |
| @sonney2k | look at neural nets | 23:54 |
| @sonney2k | no one could publish a NN paper after SVMs / kernel machines hyped | 23:55 |
| @sonney2k | 'they have local minima' | 23:55 |
| @sonney2k | and perceptron cannot even solve x-or | 23:55 |
| @sonney2k | bla bla | 23:55 |
| @lisitsyn | sonney2k: haha | 23:55 |
| @sonney2k | I guess it is the same with SVMs nowadays | 23:56 |
| -!- travis-ci [~travis-ci@ec2-23-20-64-221.compute-1.amazonaws.com] has joined #shogun | 23:57 | |
| travis-ci | [travis-ci] it's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/7087801 | 23:57 |
| -!- travis-ci [~travis-ci@ec2-23-20-64-221.compute-1.amazonaws.com] has left #shogun [] | 23:57 | |
| @sonney2k | my lesson learned is that any method is as good as the person using it | 23:57 |
| * sonney2k argh. managed to attract a more than reasonable number of mosquitoes | 23:58 | |
| @lisitsyn | hehe | 23:58 |
| @lisitsyn | sonney2k: what's with your garden? | 23:58 |
| @lisitsyn | sonney2k: conquered it? | 23:58 |
| @sonney2k | https://github.com/shogun-toolbox/shogun/pull/1085/files | 23:59 |
| --- Log closed Sun May 12 00:00:41 2013 | ||
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