| --- Log opened Thu Aug 01 00:00:56 2013 | ||
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| travis-ci | [travis-ci] it's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9707760 | 00:02 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9708725 | 00:30 |
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| shogun-buildbot | build #1443 of deb3 - modular_interfaces is complete: Failure [failed test octave_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1443 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 01:22 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 1ee5198 / / (12 files): https://github.com/shogun-toolbox/shogun/commit/1ee519836e9d0171df7ec77f9cdc8404660e5692 | 05:43 |
| shogun-notifier- | shogun: Refactor compile flags setting | 05:43 |
| shogun-notifier- | shogun: add libshogun and python_modular tests via ctest | 05:43 |
| shogun-notifier- | shogun: Travis: change script and add memory check target with ctest | 05:43 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9720614 | 05:47 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 99390eb / / (4 files): https://github.com/shogun-toolbox/shogun/commit/99390eba71e8d02af7176cbb30e8db6488db15ad | 05:51 |
| shogun-notifier- | shogun: Add CMakeLists.txt for examples | 05:51 |
| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 0aae6ea / CMakeLists.txt/ (3 files): https://github.com/shogun-toolbox/shogun/commit/0aae6ea0b0ab925871fabb5a3ce63648944e77ee | 05:56 |
| shogun-notifier- | shogun: Minor fixes in cmake files | 05:56 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9720729 | 05:57 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9720802 | 06:03 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 79e442f / / (3 files): https://github.com/shogun-toolbox/shogun/commit/79e442fcf286aa1be14cb3af5913830a69456430 | 06:30 |
| shogun-notifier- | shogun: Fix version date macros in versionstring.h | 06:30 |
| shogun-notifier- | shogun: fix ld_library_path env setting in python_modular example | 06:30 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9721269 | 06:46 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * c2a6966 / examples/undocumented/libshogun/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/c2a6966c2da3020311e5b3b23bf7f34d32ece318 | 07:16 |
| shogun-notifier- | shogun: fix libshogun examples' working directory | 07:16 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9722055 | 07:31 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 2660db7 / tests/unit/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/2660db7faf8f9736f871b581253d6ab8570c0f7c | 07:43 |
| shogun-notifier- | shogun: Build unit tests with 'make' if unit testing is enabled | 07:43 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9722750 | 07:59 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 5ab4f9c / .travis.yml,CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/5ab4f9c6ddd1aaa6335e702dba8de717ab7edd0a | 08:02 |
| shogun-notifier- | shogun: Add ENABLE_TESTING option to cmake | 08:02 |
| shogun-notifier- | shogun: ctest should be enabled with ENABLE_TESTING regardless | 08:02 |
| shogun-notifier- | shogun: whether GMOCK or GTEST framework has been found | 08:02 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9723166 | 08:19 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 9da75b5 / .travis.yml: https://github.com/shogun-toolbox/shogun/commit/9da75b5a21494d6ea8fae7a30081c2c4ef633526 | 09:57 |
| shogun-notifier- | shogun: Use ctest instead of 'make test' | 09:57 |
| shogun-notifier- | shogun: This way we can provide error output of failed test with the --output-on-failure command line arg | 09:57 |
| @wiking | yey | 09:57 |
| @wiking | getting there | 09:57 |
| hushell | gsomix: hi! Would you mind to have a function T& CMap::operator [](key)? | 10:06 |
| gsomix | hushell, yeah. it might be useful. | 10:12 |
| hushell | gsomix: I'll just copy the code from CMap::get_element() | 10:13 |
| gsomix | hushell, ok, I'll do it either today or tomorrow. | 10:13 |
| gsomix | hushell, ah, ok. :) | 10:13 |
| hushell | gsomix: I tested it, works well :) | 10:13 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9725388 | 10:15 |
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| gsomix | hushell, cool! I really don't like my CMap - I think it might contains some not effective memory usage. I'm about access by index and array for nodes. | 10:17 |
| gsomix | it works, but if you found that sth wrong with it - let me know | 10:18 |
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| hushell | gsomix: sure. I really found Map is useful when we need maintaining a lookup table, but I've been told STL is not allowed for class members | 10:33 |
| hushell | gsomix: we could improve CMap from practice :) | 10:33 |
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| thoralf | Hello everybody. | 10:54 |
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| @iglesiasg | hello hello people | 11:54 |
| @HeikoS | iglesiasg: hi! | 11:55 |
| @HeikoS | votjakovr: thanks for your comments! :) | 11:55 |
| votjakovr | hi everyone! | 11:55 |
| votjakovr | HeikoS: you are welcome! | 11:55 |
| votjakovr | HeikoS: btw check travis-ci build for your PR | 11:56 |
| @HeikoS | votjakovr: yes I saw it | 11:56 |
| votjakovr | HeikoS: there is something wrong | 11:56 |
| @HeikoS | votjakovr: its weird, some eigen issues | 11:56 |
| @HeikoS | votjakovr: but first let me squash the commits .... | 11:57 |
| votjakovr | HeikoS: anyway this is very useful features, thank you :) | 11:57 |
| @HeikoS | votjakovr: thank YOU, since I used your code :) | 11:58 |
| @HeikoS | and I literally need this feature *this* week ;) | 11:58 |
| @HeikoS | we might go a bit in this direction after GSoC if you are interested, there is lots of cool stuff waiting to be discovered :) | 11:59 |
| votjakovr | HeikoS: yeah, i see | 12:00 |
| @HeikoS | anyone here know how to use git? :) | 12:06 |
| @HeikoS | because I dont | 12:06 |
| votjakovr | HeikoS: i'm not sure, but what is the problem? | 12:08 |
| @HeikoS | votjakovr: dont worry I just found what I wanted, I always fight with git because I am so unpatient :) | 12:09 |
| thoralf | HeikoS: Maybe? ;) | 12:18 |
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| @wiking | \o/ | 12:49 |
| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 6ab1015 / / (6 files): https://github.com/shogun-toolbox/shogun/commit/6ab1015c928b57c50f9f047cca2c0f9ee21e49f5 | 12:49 |
| shogun-notifier- | shogun: Add integration test for python_modular | 12:49 |
| @wiking | this one is about to be finished | 12:49 |
| @iglesiasg | wiking, cool! | 12:49 |
| hushell | is it possible to disable a default constructor for a class derived from SGObject? | 12:50 |
| @wiking | HeikoS: this is your friend: ctest -D MemoryCheck | 12:50 |
| @HeikoS | wiking: what does it do? :) | 12:50 |
| @wiking | HeikoS: it runs valgrind on all the tests... out of box. i do not fucking have to do anything just define the tests... | 12:51 |
| @iglesiasg | hushell, what do you mean with disabling it? | 12:51 |
| @HeikoS | wiking: nice! :) | 12:51 |
| @HeikoS | wiking: add to the makefile and make it default! | 12:51 |
| @wiking | HeikoS: nono... this is cmake | 12:51 |
| @HeikoS | ah | 12:51 |
| @wiking | HeikoS: i'm not adding this to makefile ever | 12:51 |
| @iglesiasg | hushell, I saw that in FactorGraph you did at least one default constructor that basically raised an error, would that be enough? | 12:51 |
| @wiking | HeikoS: but today cmake env is going to be finished | 12:51 |
| @HeikoS | wiking: would be cool to have unit tests valgrinded by default | 12:51 |
| @HeikoS | wiking: nice! | 12:51 |
| @iglesiasg | in the FactorGraph PR, I mean | 12:51 |
| @wiking | sooo we could merge ;) | 12:51 |
| hushell | iglesiasg: I don't want to have a default constructor, but make it private is not allowed | 12:52 |
| @HeikoS | wiking: I have some work to do, but will look into the ipython stuff later | 12:52 |
| @wiking | HeikoS: well yeah unit tests are part of tests ;) | 12:52 |
| @HeikoS | wiking: next thing that is urgent | 12:52 |
| @wiking | HeikoS: okok | 12:52 |
| @iglesiasg | hushell, what if you just don't do the default constructor? If there exists another constructor, if the default is not explicitly implemented then it does not exist (IIRC) | 12:53 |
| hushell | iglesiasg: emm, no this will cause some unit tests fail | 12:53 |
| @wiking | HeikoS: and of course this would be great to have: http://cmake.org/Wiki/CTest/Coverage | 12:53 |
| hushell | iglesiasg: but if someone call it by Class(), will be problematic | 12:54 |
| @HeikoS | wiking: wow that would be awesome to have | 12:54 |
| @wiking | HeikoS: it works with gcov | 12:54 |
| @HeikoS | then we can start dropping code since we know what is tested and what isnt :) | 12:54 |
| @wiking | anyhow again this can be done by simple 2 liner in cmake ;) | 12:54 |
| @wiking | so it's an urgent fucking thing to switch to cmake | 12:55 |
| @wiking | ah and one more thing | 12:55 |
| @wiking | the way i'm going to test cmake | 12:55 |
| @wiking | is to enable remote reporting ;P | 12:55 |
| @iglesiasg | hushell, well that is what you get if you want to disable the default constructor :D | 12:55 |
| @wiking | so once it's ready i'm going to announce to test it on the mailing list | 12:55 |
| @HeikoS | wiking: I totally agree | 12:55 |
| @wiking | and whoever runs the cmake build | 12:55 |
| @wiking | automatically will submit the buildlog to a site | 12:55 |
| @wiking | :P | 12:55 |
| @wiking | hence i can analyse if something is went wrong | 12:56 |
| @wiking | and nobody has to copypaste shit | 12:56 |
| hushell | iglesiasg: okay, I need mention in the doc that never use default constructor :/ | 12:56 |
| @wiking | i'll register here shogun: http://open.cdash.org/index.php?project=PublicDashboard# | 12:56 |
| @wiking | so that we dont have to run our own cdash server | 12:57 |
| @iglesiasg | hushell, mmm but can't we make some sort of workaround? | 12:57 |
| @wiking | lisitsyn: ping | 12:57 |
| @iglesiasg | hushell, I mean, why should it be not possible to use the default constructor? What is the scenario? | 12:57 |
| lisitsyn | wiking: ja | 12:57 |
| lisitsyn | what's up? | 12:57 |
| @wiking | lisitsyn: did u find out about the octave external lib path? | 12:57 |
| lisitsyn | wiking: oh sorry I didn't manage to find anything on that | 12:58 |
| @wiking | when u have time could u look at it plz? | 12:58 |
| lisitsyn | wiking: yes this evening | 12:59 |
| @wiking | lisitsyn: cool thnx | 12:59 |
| @wiking | lisitsyn: see ctest in action: https://travis-ci.org/shogun-toolbox/shogun/jobs/9730469 (scroll to the bottom) | 13:00 |
| @wiking | lisitsyn: the add_test(name ....) worked nicely | 13:00 |
| hushell | iglesiasg: for example, I have a CDisjointSet, which need to specify the num of elements at very beginning | 13:00 |
| @iglesiasg | wiking, the remote reporting thing sounds awesome | 13:00 |
| @HeikoS | wiking: nice! | 13:01 |
| @iglesiasg | hushell, so that number of elements has to be specified because when calling other method of CDisjointSet it must be something, right? | 13:01 |
| hushell | iglesiasg: yes, if the number is nothing, everything goes wrong I guess | 13:02 |
| @iglesiasg | hushell, what if the default constructor sets it to 0, -1 or a sentinel value; you provide a setter for the number of elements; and in the methods that need it to be something you ensure that this number is something | 13:02 |
| @iglesiasg | hushell, so you cool have two use cases: | 13:03 |
| hushell | iglesiasg: this is I am doing set 1 for default case | 13:03 |
| hushell | iglesiasg: but doesn't make sense indeed | 13:03 |
| @iglesiasg | hushell, well then just make sure that if this value has not been set in the constructor or by the setter, the stuff that you guess could go wrong is not executed | 13:04 |
| @iglesiasg | with a REQUIRE or if clause with SG_ERROR | 13:04 |
| @iglesiasg | hushell, what do you think? | 13:06 |
| hushell | iglesiasg: sounds good, set -1 for default constructor and check if > 0 when calling other functions | 13:06 |
| @iglesiasg | hushell, yep | 13:06 |
| hushell | Thanks for the REQUIRE! :) | 13:07 |
| shogun-notifier- | shogun: Roman Votyakov :develop * 8f65b03 / examples/undocumented/libshogun/ (2 files): https://github.com/shogun-toolbox/shogun/commit/8f65b0370c6378f74e28dcee068023ee75322f69 | 13:10 |
| shogun-notifier- | shogun: add very basic libshogun example of GP binary classification | 13:10 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 5caa7db / examples/undocumented/libshogun/ (2 files): https://github.com/shogun-toolbox/shogun/commit/5caa7db6ccec7f40f6064e58c3a6af4ea5c294b0 | 13:10 |
| shogun-notifier- | shogun: Merge pull request #1344 from votjakovr/feature/gp_binary_classification | 13:10 |
| shogun-notifier- | shogun: | 13:10 |
| shogun-notifier- | shogun: Add very basic libshogun example of GP binary classification | 13:10 |
| @iglesiasg | HeikoS, wow you are in super-hacker mode these days! | 13:10 |
| @HeikoS | iglesiasg: need this stuff here :) | 13:10 |
| @HeikoS | python implementation was too slow ;) | 13:11 |
| @iglesiasg | HeikoS, for job? | 13:11 |
| @HeikoS | its now 20 times faster | 13:11 |
| @HeikoS | yes | 13:11 |
| @iglesiasg | HeikoS, that is pretty awesome, that you can use these things for your job | 13:11 |
| @HeikoS | yeah indeed | 13:11 |
| @HeikoS | shogun is starting to get useful | 13:11 |
| @HeikoS | since I can rely on things now | 13:11 |
| @iglesiasg | :) | 13:11 |
| @HeikoS | doesnt always have to make sure they work correct | 13:11 |
| @HeikoS | iglesiasg: where can I see the travis for the PR cannot find it | 13:12 |
| @HeikoS | already re-sent | 13:12 |
| @iglesiasg | HeikoS, it seems travis didn't trigger yet | 13:13 |
| @HeikoS | ok lets wait then, there were weird eigen3 issues | 13:13 |
| @iglesiasg | HeikoS, https://travis-ci.org/shogun-toolbox/shogun/builds | 13:13 |
| @iglesiasg | maybe when those finish | 13:14 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9730466 | 13:14 |
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| shogun-buildbot | build #1136 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1136 blamelist: Roman Votyakov <votjakovr@gmail.com> | 13:15 |
| shogun-buildbot | build #1137 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1137 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 14:02 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9731072 | 14:36 |
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| @HeikoS | votjakovr: any idea why the travis breaks? | 14:58 |
| @HeikoS | https://travis-ci.org/shogun-toolbox/shogun/jobs/9731038 | 14:58 |
| @HeikoS | did you have a similar issue before? | 14:58 |
| @HeikoS | wiking: which eigen version is used on travis, how can I find out? | 15:00 |
| @wiking | HeikoS: it's there | 15:00 |
| @wiking | in the logs | 15:00 |
| @HeikoS | where do I have to look? | 15:01 |
| @wiking | Setting up libeigen3-dev (3.0.5-1) ... | 15:01 |
| @HeikoS | ah | 15:01 |
| @wiking | why we need newer? | 15:01 |
| @wiking | :) | 15:01 |
| @HeikoS | thanks | 15:02 |
| @HeikoS | wiking: yes :) | 15:02 |
| @HeikoS | please | 15:02 |
| @HeikoS | although its bad to need 3.1 | 15:02 |
| @wiking | mmm well travis will have only that | 15:02 |
| @HeikoS | what do you think? Can we make that a dependency? | 15:02 |
| @HeikoS | 3.1? | 15:02 |
| @wiking | well how old is 3.1? | 15:02 |
| @wiking | i mean travis is a simple ubuntu | 15:02 |
| @wiking | not the latest i think it's LTS | 15:02 |
| @HeikoS | 3.2 is out already | 15:02 |
| @HeikoS | stable | 15:02 |
| @wiking | but still ubuntu is quite frequently updated | 15:02 |
| @wiking | imagine somebody comes with a centos | 15:03 |
| @wiking | 100% that he will not have eigen 3.1 within 2 years :P | 15:03 |
| @HeikoS | 3.1 was release june 2012 | 15:03 |
| @wiking | i'm just saying... | 15:03 |
| @HeikoS | mmmh | 15:03 |
| @wiking | well we can still make it dependent | 15:03 |
| @HeikoS | mmmmmh | 15:03 |
| @HeikoS | wiking: sorry gotta go | 15:03 |
| @wiking | and in worst case cmake can download it for shogun :P | 15:04 |
| @wiking | nw | 15:04 |
| thoralf | wiking: eigen3 3.1.0~beta1-1ubuntu1 was already contained in Queztal (2012-06-13) | 15:07 |
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| @iglesiasg | hey thoralf! | 15:23 |
| @iglesiasg | thoralf, I've got a question for you :) | 15:23 |
| thoralf | iglesiasg: Aloah. | 15:23 |
| @iglesiasg | thoralf, you were using eclipse with shogun, right? | 15:23 |
| thoralf | iglesiasg: Yes and no - since last friday it's crashing all the time and I stopped using it. ;) | 15:24 |
| thoralf | iglesiasg: But maybe I can help. ;) | 15:24 |
| @iglesiasg | thoralf, oh I see | 15:24 |
| @iglesiasg | thoralf, I was in the mood of trying java_modular so I thought it might be a good idea to have it set up with eclipse | 15:25 |
| thoralf | iglesiasg: I have never tried to setup a project based on the modular interfaces, sorry. | 15:25 |
| @iglesiasg | thoralf, all right. Thanks anyway! | 15:27 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * e55bff1 / / (5 files): https://github.com/shogun-toolbox/shogun/commit/e55bff179bc4f52c1df092da7321751837bea5db | 15:41 |
| shogun-notifier- | shogun: Add csharp_modular and java_modular examples support | 15:41 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9735866 | 16:04 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 7782a14 / examples/undocumented/java_modular/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/7782a14f31aa9b0c993758f40434f8db33a88e98 | 17:04 |
| shogun-notifier- | shogun: Fix java_modular examples | 17:04 |
| shogun-notifier- | shogun: Force to build Load.java before any other examples | 17:04 |
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| shogun-notifier- | shogun: Roman Votyakov :develop * f6b5c23 / src/shogun/machine/gp/ (4 files): https://github.com/shogun-toolbox/shogun/commit/f6b5c23b0ea6e506e93ef3b96528fa75c82cf01a | 17:39 |
| shogun-notifier- | shogun: move common methods from drived classes of inference methods to base class | 17:39 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * ca5c973 / src/shogun/machine/gp/ (4 files): https://github.com/shogun-toolbox/shogun/commit/ca5c9739f483956555068fa4ac11c2dd76417a42 | 17:39 |
| shogun-notifier- | shogun: Merge pull request #1346 from votjakovr/feature/gp_refactoring | 17:39 |
| shogun-notifier- | shogun: | 17:39 |
| shogun-notifier- | shogun: Move common methods from drived classes of inference methods to base class | 17:39 |
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| @iglesiasg | hushell, how is it going with the inference? | 17:43 |
| @iglesiasg | hi pickle27! | 17:45 |
| @iglesiasg | pickle27, I took a quick look at your PR yesterday, I am going to write a couple of comments now about something I didn't quite understand | 17:45 |
| @iglesiasg | pickle27, if you have a moment, help me with the please :) | 17:45 |
| pickle27 | iglesiasg: okay | 17:46 |
| pickle27 | iglesiasg: I am actually defending my thesis in an hour so I probably won't get to it until tomorrow | 17:46 |
| @iglesiasg | pickle27, oh sure, never mind then. I will write then later, no distraction now! | 17:46 |
| @iglesiasg | pickle27, good luck with it! | 17:46 |
| pickle27 | iglesiasg: thanks! | 17:47 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9739308 | 17:52 |
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| shogun-buildbot | build #1138 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1138 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 17:54 |
| pickle27 | iglesiasg: basically those new lines in SGInterface are telling the interface that there is a rhs return arg | 17:56 |
| @iglesiasg | pickle27, rhs return arg as an argument by reference? | 17:56 |
| pickle27 | right hand side | 17:57 |
| @iglesiasg | yes, but what did you mean with return arg? | 17:57 |
| @iglesiasg | rhs agree, but return? :) | 17:57 |
| pickle27 | oh so if the shogun call returns something you need to tell the interface | 17:57 |
| pickle27 | then it checks for it and returns whatever it is properly | 17:58 |
| pickle27 | so its return by value sort of | 17:58 |
| @iglesiasg | pickle27, aham, ok so the return values in static interface are also passed as right hand side arguments? | 17:58 |
| @iglesiasg | sorry if that is a stupid question :) | 17:58 |
| pickle27 | iglesiasg: kind of, to be honest I don't know fully how the interface works | 17:59 |
| @iglesiasg | pickle27, hehe ok | 17:59 |
| @iglesiasg | pickle27, anyway what is the logic beneath the new checks? | 17:59 |
| pickle27 | I looked at how the 'classify' function worked because it returns data and the saw what was missing from my new function that needed to return data | 17:59 |
| pickle27 | iglesiasg: its copied from the classify function | 18:00 |
| pickle27 | its telling the interface that its going to have to return something | 18:00 |
| @iglesiasg | pickle27, oh ok, that makes one feel safer indeed hehe | 18:00 |
| pickle27 | yeah without that line it doesn't return anything | 18:00 |
| @iglesiasg | oh really? I would never have guessed that | 18:01 |
| pickle27 | yeah me either | 18:01 |
| pickle27 | it depends on the interface, because the return arg is still set even if you don't tell the interface that one exists | 18:02 |
| pickle27 | it actually worked in octave static without it but not in R and thats when I found the fix | 18:02 |
| @iglesiasg | pickle27, it still works in octave though, right? | 18:02 |
| pickle27 | yeah | 18:03 |
| pickle27 | iglesiasg: you can take a look at cmd_classify line 4584 in SGInterface.cpp | 18:03 |
| pickle27 | thats how I figured out what to do | 18:03 |
| pickle27 | anyways I've got to go! | 18:04 |
| pickle27 | see you guys tomorrow! | 18:04 |
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| @iglesiasg | L4584, crazy | 18:04 |
| @iglesiasg | good luck! | 18:04 |
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| shogun-buildbot | build #1139 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1139 blamelist: Roman Votyakov <votjakovr@gmail.com> | 18:40 |
| shogun-notifier- | shogun: Kevin :develop * 5c3603f / / (2 files): https://github.com/shogun-toolbox/shogun/commit/5c3603f9e62442cdbadbda0add11fa858c10b04b | 18:51 |
| shogun-notifier- | shogun: fixed converters and the static interface and added an r static example for Jade | 18:51 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 4ab4174 / / (2 files): https://github.com/shogun-toolbox/shogun/commit/4ab4174e31634ea57a2b98ff2fe7270cdf1ba20e | 18:51 |
| shogun-notifier- | shogun: Merge pull request #1343 from pickle27/develop | 18:51 |
| shogun-notifier- | shogun: | 18:51 |
| shogun-notifier- | shogun: fixed converters and the static interface and added an r static example ... | 18:51 |
| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 9529b5d / / (11 files): https://github.com/shogun-toolbox/shogun/commit/9529b5d347b0672f4f07bf75619b361ea5fb77b3 | 18:53 |
| shogun-notifier- | shogun: Add ruby, lua, octave example targets | 18:53 |
| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 50b2a64 / .travis.yml: https://github.com/shogun-toolbox/shogun/commit/50b2a640528ab89ab9e68fb9cc1360f55c3267e0 | 18:54 |
| shogun-notifier- | shogun: Travis: remove rvm variable | 18:54 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9740688 | 18:57 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 129254b / src/shogun/ (3 files): https://github.com/shogun-toolbox/shogun/commit/129254b6b556335831569c2c864cd1c8bf782e55 | 18:59 |
| shogun-notifier- | shogun: convert functions in PLif to use sgvector | 18:59 |
| shogun-notifier- | shogun-data: foulwall :master * e0a2e04 / tapkee/faces_transparent.zip,tapkee/mnist.zip,tapkee/oks.zip: https://github.com/shogun-toolbox/shogun-data/commit/e0a2e04385ecbb5aa7947fe091519f1691b2638d | 19:04 |
| shogun-notifier- | shogun-data: data for tapkee | 19:04 |
| shogun-notifier- | shogun-data: Soeren Sonnenburg :master * d80dec7 / tapkee/faces_transparent.zip,tapkee/mnist.zip,tapkee/oks.zip: https://github.com/shogun-toolbox/shogun-data/commit/d80dec70fd3e7c348f7750f77b72f2beb4c670ef | 19:04 |
| shogun-notifier- | shogun-data: Merge pull request #10 from ZhengyangL/master | 19:04 |
| shogun-notifier- | shogun-data: | 19:04 |
| shogun-notifier- | shogun-data: data for tapkee | 19:04 |
| shogun-notifier- | shogun-demo: foulwall :master * 32c797c / / (16 files): https://github.com/shogun-toolbox/shogun-demo/commit/32c797cad3d9e375e1e8dd25b364b11923fd2885 | 19:07 |
| shogun-notifier- | shogun-demo: 1. add README 2. merge demos from tapkee website with .zip dataset | 19:07 |
| shogun-notifier- | shogun-demo: Soeren Sonnenburg :master * c155c7f / / (16 files): https://github.com/shogun-toolbox/shogun-demo/commit/c155c7fd2a626ad4d114044d584cba50466a232f | 19:07 |
| shogun-notifier- | shogun-demo: Merge pull request #18 from ZhengyangL/ocr | 19:07 |
| shogun-notifier- | shogun-demo: | 19:07 |
| shogun-notifier- | shogun-demo: 1. add README 2. merge demos from tapkee website with .zip dataset | 19:07 |
| @sonney2k | foulwall, nice thanks! | 19:07 |
| @wiking | sonney2k: how do u imagine the ./configure -> cmake transition? | 19:08 |
| @sonney2k | wiking, rm configure and related scripts and done | 19:10 |
| @sonney2k | wiking, but I would want your cmake stuff merged first and enable it on the buildbots | 19:10 |
| @wiking | sonney2k: ok so as i thought merge it | 19:11 |
| @wiking | and then use it | 19:11 |
| @wiking | and then if everything is ok remove the old scripts | 19:11 |
| shogun-buildbot | build #1140 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1140 blamelist: Soeren Sonnenburg <sonne@debian.org>, Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 19:21 |
| @sonney2k | iglesiasg, I am a bit hmmhh about http://nn.7nn.de:8000/tapkee/entrance the tapkee dimred examples | 19:23 |
| @sonney2k | iglesiasg, this is totally static right? | 19:23 |
| @sonney2k | iglesiasg, I mean would it be possible to dynamically generate such embedding in *short* time? | 19:23 |
| @iglesiasg | sonney2k, IIRC it takes a bit of time for a demo to generate am embedding like that | 19:25 |
| @sonney2k | iglesiasg, how much? | 19:27 |
| @sonney2k | iglesiasg, I would rather prefer smaller sample sizes etc but a *real* demo | 19:27 |
| @iglesiasg | sonney2k, I am not sure. I don't remember exactly | 19:27 |
| @iglesiasg | sonney2k, I can run it here in a few minutes if you like | 19:27 |
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| @sonney2k | iglesiasg, would be nice | 19:36 |
| @sonney2k | foulwall, we have to improve the dimension reduction / tapkee examples a bit to make them interactive | 19:38 |
| @sonney2k | foulwall, currently it is just static (boring) stuff | 19:38 |
| van51 | sonney2k: hi | 19:41 |
| @sonney2k | foulwall, another question - could we have some tree? | 19:41 |
| @sonney2k | foulwall, sth like this https://www.biomedcentral.com/content/figures/1471-2105-5-126-1-l.jpg | 19:43 |
| van51 | sonney2k: first of all, for the normalization in the converter, I can't compare it directly to the dotfeatures | 19:43 |
| @sonney2k | van51, hey! | 19:43 |
| @sonney2k | van51, why not? | 19:43 |
| @wiking | HeikoS: yo | 19:43 |
| van51 | sonney2k: because whenever the hashed vector is needed there we compute it through the converter | 19:43 |
| @wiking | HeikoS: actually what's the status of the foundation? | 19:43 |
| van51 | sonney2k: and it only performs its own hashing in the dense_dot and add_to_dense methods | 19:43 |
| @HeikoS | wiking: stalled | 19:43 |
| @wiking | HeikoS: should not | 19:44 |
| @HeikoS | wiking: there are some other more important things unfortunately | 19:44 |
| @iglesiasg | sonney2k, the one with Oksana's faces takes almost no time | 19:44 |
| @wiking | it is important as well! | 19:44 |
| @HeikoS | my work (1 week intense since NIPS reviews), google PO (I have problems with my bank) and other things | 19:44 |
| @HeikoS | wiking: I know | 19:44 |
| @HeikoS | but not as important as the other ones | 19:44 |
| van51 | sonney2k: so what I have done in the unit test is compare the result of the dense_dot method | 19:44 |
| @sonney2k | iglesiasg, nice then :) | 19:44 |
| van51 | sonney2k: but as I said the result must be different due to numerical rounding errors and stuff | 19:45 |
| @sonney2k | van51, I don't understand why it should not be possible | 19:45 |
| @iglesiasg | sonney2k, about 0.015 seconds in total | 19:45 |
| @sonney2k | iglesiasg, too fast ;) | 19:45 |
| @sonney2k | iglesiasg, no svm is as fast as this | 19:45 |
| van51 | sonney2k: well, for instance in the dot method of the dotfeatures, where the full hashed vector is needed | 19:46 |
| van51 | sonney2k: it is computed from the converter | 19:46 |
| @iglesiasg | sonney2k, there are no many images though, but I think more than enough for a demo | 19:46 |
| @sonney2k | van51, you could do dot_features->get_computed_dot_feature_vector() and it should be directly comparable to your sparse vector | 19:46 |
| @iglesiasg | sonney2k, maybe a demo inspired by these images could be cool. Like the user takes a few screenshots with a webcam | 19:46 |
| @sonney2k | iglesiasg, yeah but later I am currently rather only wanting to have static input all the rest is a security nightmare | 19:47 |
| van51 | sonney2k: how is that calculated? through which method? | 19:47 |
| van51 | sonney2k: i'll check it actually | 19:47 |
| @iglesiasg | sonney2k, I understand | 19:47 |
| @iglesiasg | dinner time now, see you later | 19:47 |
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| @sonney2k | van51, it just does add_to_dense_vec | 19:48 |
| van51 | sonney2k: ok after this compilation is finished I'll check it | 19:48 |
| @sonney2k | gsomix_, how was the lecture and any progress? | 19:53 |
| gsomix_ | sonney2k, hello. lecture was interesting - about past and future of science in Russia, huh. | 19:54 |
| gsomix_ | sonney2k, working now. | 19:54 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9743858 | 19:55 |
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| * sonney2k is off for water | 20:09 | |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9743926 | 20:25 |
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| @sonney2k | van51, and? | 20:37 |
| van51 | sonney2k: I did a git checkout and had to recompile :/ | 20:37 |
| @sonney2k | van51, but you only do libshogun right? | 20:37 |
| @sonney2k | so it should take like 1-2mins? | 20:37 |
| van51 | sonney2k: I've added python_modular as well | 20:37 |
| van51 | sonney2k: so I could prototype :p | 20:38 |
| @sonney2k | for what? | 20:38 |
| @sonney2k | yeah well if your script is python then yes. | 20:38 |
| van51 | sonney2k: ok so it outputs the same result :) | 20:39 |
| @sonney2k | van51, alright then so you should get the same result then for whatever kernel (if you dot is correct - this is not covered in this test) | 20:41 |
| @sonney2k | or the webspam benchmark | 20:42 |
| van51 | sonney2k: I have to go now | 20:42 |
| van51 | sonney2k: but I'll check it again tonight | 20:42 |
| van51 | sonney2k: btw I've also updated the PR on the quadratic for the dotfeatures | 20:43 |
| van51 | sonney2k: have a look if you have some time | 20:43 |
| van51 | bye cu in a few hours | 20:46 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9743997 | 20:50 |
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| votjakovr | HeikoS: hi there? | 21:01 |
| @HeikoS | votjakovr: hi! | 21:01 |
| @HeikoS | votjakovr: sampling the approximate posterior is quite hard | 21:01 |
| votjakovr | HeikoS: yeah, btw when i changed implementation your example works well :) | 21:03 |
| @HeikoS | votjakovr: what did you change? | 21:03 |
| votjakovr | HeikoS: solve L*L^T * B = I | 21:03 |
| @HeikoS | votjakovr: as you had it before? | 21:04 |
| votjakovr | HeikoS: yep | 21:04 |
| @HeikoS | votjakovr: cool, could you send a patch, then I will try | 21:04 |
| votjakovr | HeikoS: anyway matrix K looks like symetric | 21:05 |
| @HeikoS | votjakovr: I know its also easy to fix that via taking 0.5*(K+K^T) | 21:05 |
| @HeikoS | but the problem really are the eigenvalues that sometimes get massively negative, if you try larger kernel sizes you will see | 21:05 |
| votjakovr | HeikoS: so is L*L^t * B = I more appropriate in our case? | 21:07 |
| @HeikoS | votjakovr: yeah whatever makes this thing work :) | 21:07 |
| @HeikoS | send a patch, I will have a look and try it tomorrow then | 21:07 |
| @HeikoS | votjakovr: still a bit weird that this makes such a difference | 21:08 |
| votjakovr | HeikoS: yeah, it's weird, i agree | 21:11 |
| @HeikoS | votjakovr: in fact, one doesnt need the covariance matrix itself, but rather its cholesky decomposition | 21:17 |
| @HeikoS | votjakovr: if there was a stable method for that, that would be awesome | 21:18 |
| @sonney2k | wiking, btw why don't you merge your CMakefile.txt? | 21:19 |
| votjakovr | HeikoS: yeah, btw i've sent a PR | 21:21 |
| shogun-notifier- | shogun: Roman Votyakov :develop * 2ddb4a6 / src/shogun/machine/gp/LaplacianInferenceMethod.cpp: https://github.com/shogun-toolbox/shogun/commit/2ddb4a6f53aef14880c277a4709752202e30e7dc | 21:21 |
| shogun-notifier- | shogun: change implementation of posterior aproximation covariance matrix | 21:21 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * c19a677 / src/shogun/machine/gp/LaplacianInferenceMethod.cpp: https://github.com/shogun-toolbox/shogun/commit/c19a67756281747b69a29877b4272d5653c22e0e | 21:21 |
| shogun-notifier- | shogun: Merge pull request #1347 from votjakovr/feature/gp_binary_classification | 21:21 |
| shogun-notifier- | shogun: | 21:21 |
| shogun-notifier- | shogun: change implementation of posterior aproximation covariance matrix | 21:21 |
| @HeikoS | votjakovr: thanks! | 21:21 |
| @HeikoS | will try out | 21:21 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9744176 | 21:22 |
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| votjakovr | HeikoS: welcome :) | 21:23 |
| @HeikoS | votjakovr: will try that out tomorrow, btw how is EP looking? | 21:23 |
| votjakovr | HeikoS: in process... | 21:24 |
| @HeikoS | votjakovr: ok cool | 21:25 |
| @HeikoS | votjakovr: going home now, see you tomorrow! have a good evening | 21:25 |
| votjakovr | HeikoS: bye, you too ;) | 21:25 |
| lisitsyn | HeikoS: have you seen wiking's effort? | 21:28 |
| lisitsyn | :) | 21:28 |
| lisitsyn | exactly what you wanted | 21:29 |
| @HeikoS | lisitsyn: regarding? | 21:29 |
| @HeikoS | sorry so busy today | 21:29 |
| lisitsyn | HeikoS: cmake! | 21:29 |
| @HeikoS | lisitsyn: ok yeah | 21:29 |
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| @HeikoS | that is totally cool | 21:29 |
| lisitsyn | HeikoS: I guess that solves most of your concerns | 21:29 |
| @HeikoS | lisitsyn: which ones do you mean? | 21:30 |
| @HeikoS | ;) | 21:30 |
| lisitsyn | HeikoS: installation etc | 21:30 |
| lisitsyn | distribution | 21:30 |
| @HeikoS | yeah | 21:30 |
| @HeikoS | hopefully :D | 21:30 |
| @HeikoS | but would be amazing if these things would be solved now | 21:30 |
| lisitsyn | I think they are pretty near | 21:30 |
| lisitsyn | to be solved | 21:30 |
| @HeikoS | cmake is also just more modern | 21:31 |
| lisitsyn | HeikoS: bless wiking :D | 21:31 |
| @HeikoS | so good to have that | 21:31 |
| lisitsyn | HeikoS: well cmake is old too | 21:31 |
| @HeikoS | yeah Ill have a beer on him later :) | 21:31 |
| lisitsyn | has some old fashioned stuff | 21:31 |
| @HeikoS | lisitsyn: we could also start thinking about compiling shogun in parts, takes toooo long on my machine | 21:31 |
| lisitsyn | HeikoS: yes indeed | 21:32 |
| lisitsyn | HeikoS: not only swig btw | 21:32 |
| lisitsyn | the C++ code is a bit slow to compile too now | 21:32 |
| @HeikoS | lisitsyn: yeah talking about that | 21:32 |
| @HeikoS | c++ now takes as long as swig | 21:33 |
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| lisitsyn | HeikoS: massive eigen etc | 21:33 |
| lisitsyn | compiling eigen code is massive work | 21:33 |
| @HeikoS | lisitsyn: maybe we can do modules or so, but I really gotta go now :) see you | 21:34 |
| lisitsyn | HeikoS: yeah ok | 21:34 |
| lisitsyn | wiking: okay I'll get to octave in a bit | 21:35 |
| shogun-buildbot | build #1141 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1141 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 21:40 |
| @sonney2k | HeikoS, but at least you can compile with make -j 8 | 21:42 |
| @sonney2k | modular is single cpu and won't scale | 21:42 |
| @HeikoS | sonney2k: ah really? thats annoying | 21:42 |
| @HeikoS | sonney2k: so I need more CPUs | 21:42 |
| @HeikoS | votjakovr: it works perfectly now :) :) | 21:42 |
| @HeikoS | ok, last work from me, going home.....bye | 21:43 |
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| shogun-buildbot | build #1142 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1142 blamelist: Roman Votyakov <votjakovr@gmail.com> | 22:26 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9748885 | 22:49 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 07ee542 / src/interfaces/modular/IO.i,src/interfaces/modular/IO_includes.i: https://github.com/shogun-toolbox/shogun/commit/07ee5429dc69c439223e9e77dd5e3948a61fa667 | 23:43 |
| shogun-notifier- | shogun: add CSVFile to modular interfaces | 23:43 |
| --- Log closed Fri Aug 02 00:00:57 2013 | ||
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