| --- Log opened Mon Aug 12 00:00:11 2013 | ||
| @iglesiasg | all right guys | 00:00 |
|---|---|---|
| @iglesiasg | good night! | 00:00 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10094221 | 00:26 |
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| shogun-buildbot | build #486 of nightly_default is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_default/builds/486 | 03:21 |
| shogun-buildbot | build #421 of nightly_all is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_all/builds/421 | 04:12 |
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| shogun-notifier- | shogun: Fernando Iglesias :develop * 6ab44d6 / src/shogun/features/DenseFeatures.cpp,src/shogun/features/DenseFeatures.h: https://github.com/shogun-toolbox/shogun/commit/6ab44d6b85970a7a13e17e6a5fe75b61e28fd2e7 | 08:17 |
| shogun-notifier- | shogun: Make CDenseFeatures::get_num_features() const | 08:17 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * c5d7e7a / src/shogun/ (16 files): https://github.com/shogun-toolbox/shogun/commit/c5d7e7a9595fa3326d352365ab505fcd27d45f72 | 08:17 |
| shogun-notifier- | shogun: Make CLabels and subclasses get_label_type and get_num_labels methods const | 08:17 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * c9a7d85 / src/shogun/ (18 files): https://github.com/shogun-toolbox/shogun/commit/c9a7d85120fbfa2522cda2db2face726a9810a43 | 08:17 |
| shogun-notifier- | shogun: Merge pull request #1389 from iglesias/develop | 08:17 |
| shogun-notifier- | shogun: | 08:17 |
| shogun-notifier- | shogun: Make a few getters const. | 08:17 |
| shogun-buildbot | build #1723 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1723 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:20 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * e397d23 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/e397d2331bb0450ab0e1e6ef365a2308ba880b72 | 08:27 |
| shogun-notifier- | shogun: mute deprecated warning on cygwin | 08:27 |
| shogun-buildbot | build #1724 of deb1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1724 | 08:27 |
| shogun-buildbot | build #1381 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1381 blamelist: Soeren Sonnenburg <sonne@debian.org>, Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:28 |
| shogun-buildbot | build #1185 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1185 blamelist: Soeren Sonnenburg <sonne@debian.org>, Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:29 |
| shogun-buildbot | build #864 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/864 blamelist: Soeren Sonnenburg <sonne@debian.org>, Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:30 |
| shogun-buildbot | build #1370 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1370 blamelist: Soeren Sonnenburg <sonne@debian.org>, Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:37 |
| shogun-buildbot | build #1382 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1382 blamelist: Soeren Sonnenburg <sonne@debian.org> | 08:40 |
| shogun-buildbot | build #1186 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1186 blamelist: Soeren Sonnenburg <sonne@debian.org> | 08:41 |
| shogun-buildbot | build #865 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/865 blamelist: Soeren Sonnenburg <sonne@debian.org> | 08:42 |
| shogun-buildbot | build #1371 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1371 blamelist: Soeren Sonnenburg <sonne@debian.org> | 08:45 |
| shogun-buildbot | build #1486 of deb3 - modular_interfaces is complete: Failure [failed compile python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1486 blamelist: Soeren Sonnenburg <sonne@debian.org> | 08:51 |
| shogun-buildbot | build #1485 of deb3 - modular_interfaces is complete: Failure [failed compile python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1485 blamelist: Soeren Sonnenburg <sonne@debian.org>, Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:58 |
| @sonney2k | wiking, hurray one buildbot works now now you only have to fix the rest :P | 09:02 |
| @sonney2k | lisitsyn, man what happened to libshogun's compile time? it is sth like 6 minutes now on my old machine (used to be ~1min) | 09:05 |
| @sonney2k | and that already is with 2 cores | 09:06 |
| lisitsyn | sonney2k: have you noticed any particular file? | 09:06 |
| lisitsyn | that is too slow I mean | 09:06 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10103361 | 09:07 |
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| @sonney2k | lisitsyn, no | 09:10 |
| @sonney2k | lisitsyn, I am on battery currently so I cannot thoroughly test | 09:11 |
| lisitsyn | sonney2k: well we now have a lot of eigen3 code | 09:11 |
| @sonney2k | now it would be cool if the buildbots compile time could somehow be plotted | 09:11 |
| @sonney2k | so we would see | 09:11 |
| @sonney2k | lisitsyn, might be just that | 09:12 |
| lisitsyn | eigen3 is slow indeed, even simple code takes >30s I'd say | 09:12 |
| @sonney2k | still sucks big time | 09:12 |
| lisitsyn | sonney2k: clang is much better in this btw | 09:12 |
| lisitsyn | just to compare, travis compiles and tests tapkee in 6 minutes | 09:12 |
| lisitsyn | with clang | 09:13 |
| @sonney2k | clang is too old here | 09:13 |
| lisitsyn | and 19 minutes with gcc | 09:13 |
| @sonney2k | lisitsyn, hmmh clang fails in 8 minutes g++ takes > 20 | 09:14 |
| @sonney2k | but some unit tests fails hmmhh | 09:14 |
| @sonney2k | lisitsyn, how can one check the -Wfoo arguments with cmake? | 09:15 |
| @sonney2k | lisitsyn, I mean not specify them if they are not supported? | 09:15 |
| @sonney2k | lisitsyn, is there some test in cmake for that? | 09:15 |
| lisitsyn | sonney2k: no I don't know any | 09:15 |
| @sonney2k | lisitsyn, how are the compiler flags checked | 09:16 |
| @sonney2k | ? | 09:16 |
| lisitsyn | sonney2k: what compile flags? | 09:17 |
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| lisitsyn | sonney2k: like C++11? | 09:17 |
| @sonney2k | yeah and march=native etc | 09:17 |
| @sonney2k | not all compilers have this | 09:17 |
| lisitsyn | afaik there is no magic for that | 09:18 |
| lisitsyn | you just code that in CMakeLists | 09:18 |
| @sonney2k | lisitsyn, but how is the option checked? I mean we need this exact mechanism for warnings now too | 09:21 |
| lisitsyn | sonney2k: for C++11 it just tries to compile some snippers | 09:22 |
| lisitsyn | ts* | 09:22 |
| lisitsyn | there is try_compile command in cmake | 09:22 |
| lisitsyn | iirc | 09:22 |
| @sonney2k | lisitsyn, ok so the same we should do for warnings but with the flag -Werror | 09:23 |
| lisitsyn | yes we can do that I think | 09:24 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10103470 | 09:38 |
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| shogun-buildbot | build #1187 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1187 | 09:43 |
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| @iglesiasg | good morning! | 09:52 |
| lisitsyn | iglesiasg: morning | 10:02 |
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| van51 | sonney2k: hello | 10:16 |
| van51 | sonney2k: these are some snippers from helgrind's output on my program : http://pastebin.com/tMYjpKn2 | 10:17 |
| van51 | sonney2k: basically if I'm not mistaken it boils down to race conditions in ref counting in Version, Parallel and SGIO | 10:17 |
| van51 | sonney2k: I g2g now | 10:18 |
| van51 | let me know what you think | 10:18 |
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| sonne|work | wiking: how can one specify custom paths for gmock / gtest? | 10:55 |
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| thoralf | Hey. | 11:30 |
| sonne|work | Ho | 11:35 |
| thoralf | Hey S?ren | 11:37 |
| @wiking | sonne|work: why would u? | 13:38 |
| sonne|work | wiking: http://shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1187/steps/configure/logs/stdio | 13:38 |
| sonne|work | not available | 13:38 |
| @wiking | error: could not find svn for checkout of GoogleMock | 13:38 |
| @wiking | so no svn ;) | 13:38 |
| @wiking | and how would u provide then the gmock/gtest? | 13:39 |
| sonne|work | wiking: by path? | 13:40 |
| sonne|work | it is available in $HOME/ | 13:40 |
| sonne|work | wiking: is it that difficult? I mean when you download you also have a custom path somewhere? | 13:42 |
| @wiking | sonne|work: no i mean how would u download it at the first place | 13:42 |
| sonne|work | wiking: as admin on the machine | 13:42 |
| sonne|work | wiking: btw could you please have a look at the other buildbots, bsd is unhappy too: http://shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1382/steps/configure/logs/stdio | 13:43 |
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| lambday | hi anyone got this error while make unit-tests? File "base/clone_unittest.cc.py", line 82, in <module> | 16:29 |
| lambday | output_file = sys.argv[2] IndexError: list index out of range | 16:29 |
| @wiking | lambday: use cmake plz | 16:33 |
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| lambday_ | wiking: so I gotta rebase with feature/CMake? | 16:38 |
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| sonne|work | wiking: cmake has that too | 16:44 |
| sonne|work | lambday_: no cmake is merged! | 16:44 |
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| lambday_ | sonne|work: yes just saw.. but got an error.. it didn't detect cblas I guess.. | 16:49 |
| lambday_ | all undefined ref errors for cblas stuffs | 16:49 |
| sonne|work | lambday_: better do a git clean -dfx stop using configure/make but use cmake and show us the output somewhere | 16:52 |
| lambday_ | sonne|work: okay I'm trying.. | 16:54 |
| thoralf | sonne|work: Would it make sense to remove configure/make, so that nobody is tempted to use it? | 16:54 |
| thoralf | sonne|work: The old files are still in the history, so we don't lose anything. | 16:55 |
| sonne|work | thoralf: if we could compile static interfaces yes! | 16:55 |
| sonne|work | thoralf: currently we dont' have that in cmake ... | 16:55 |
| thoralf | sonne|work: Did not know that. Thanks for updating. ;) | 16:55 |
| lambday_ | sonne|work: wiking: did a git clean -dfx, then cmake and make, this is what I get https://gist.github.com/lambday/6211595 | 17:07 |
| sonne|work | lambday_: maybe you need to a LD_LIBRARY_PATH or put /usr/lib64/atlas in /etc/ld.so.conf* | 17:11 |
| lambday_ | sonne|work: alright.. trying... but with configure it didn't complain about this | 17:12 |
| lambday_ | sonne|work: /etc/ld.so.conf.d/atlas-x86_64.conf is already there, with /usr/lib64/atlas | 17:14 |
| lambday_ | this is a new machine, so may be I forgot to set up somethng :-/ | 17:15 |
| @wiking | sonne|work: if i change the master.cfg do i have to -HUP or restart the bot? | 17:25 |
| @wiking | shogun-buildbot force build "bsd1 - libshogun" | 17:27 |
| @wiking | shogun-buildbot, force build 'bsd1 - libshogun' | 17:27 |
| shogun-buildbot | build forced [ETA 4m56s] | 17:27 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:27 |
| shogun-buildbot | build #1383 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1383 | 17:28 |
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| @wiking | shogun-buildbot, force build 'bsd1 - libshogun' | 17:29 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:29 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:29 |
| shogun-buildbot | build #1384 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1384 | 17:29 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 9472186 / examples/undocumented/python_modular/ (13 files): https://github.com/shogun-toolbox/shogun/commit/9472186b6ce76e78cfa889d9c571aee5ec5c0369 | 17:29 |
| shogun-notifier- | shogun: convert converters to use CSVFile | 17:29 |
| @wiking | doh | 17:29 |
| @sonney2k | lambday_, no some ubuntu machines have this issue | 17:29 |
| @sonney2k | wiking, any clue? | 17:30 |
| @wiking | abour? | 17:30 |
| @wiking | bout? | 17:30 |
| @sonney2k | wiking, do you actually attempt to link the code in the end or just compile -c ? | 17:30 |
| @wiking | where what? :) | 17:30 |
| @sonney2k | wiking, lambday_ has a linker error with cmake | 17:30 |
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| @sonney2k | for blas | 17:30 |
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| @wiking | aaah mmm | 17:31 |
| @wiking | shogun-buildbot, force build 'bsd1 - libshogun' | 17:31 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:31 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:31 |
| @sonney2k | wiking, I recall seeing that with configure until some hack | 17:31 |
| shogun-buildbot | build #1385 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1385 | 17:31 |
| @sonney2k | wiking, please use shogun-buildbot force build --branch=develop 'bsd1 - libshogun' | 17:31 |
| @wiking | shogun-buildbot force build --branch=develop 'bsd1 - libshogun' | 17:31 |
| @wiking | mmm | 17:32 |
| @wiking | doesn't want to :) | 17:32 |
| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:32 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:32 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:32 |
| @wiking | yey | 17:32 |
| shogun-buildbot | build #1386 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1386 | 17:32 |
| @wiking | oh ok | 17:32 |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:33 |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:33 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:33 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:33 |
| shogun-buildbot | build #1387 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1387 | 17:33 |
| @wiking | whyyyy | 17:33 |
| @wiking | lemme try | 17:33 |
| @sonney2k | wiking, hah I guess it has g++ and clang? | 17:34 |
| lambday_ | sonney2k: wiking: I have liblapack.so in two places, /usr/lib64/ and /usr/lib64/atlas... when I set LD_LIBRARY_PATH and did a ldconfig, it gave an error complaining about conflicting path | 17:34 |
| @wiking | lambday_: ok | 17:35 |
| @wiking | lambday_: can u do this plz | 17:35 |
| pickle27 | iglesiasg: where should I put my ipython notebook, in applications? | 17:35 |
| @wiking | lambday_: cd build && rm -rf * && cmake <whatever options u use> .. | 17:35 |
| @wiking | and then | 17:35 |
| @wiking | lambday_: ctest -D Experimental | 17:35 |
| @sonney2k | wiking, in any case it is not linking against cblas (cf https://gist.github.com/lambday/6211595) | 17:35 |
| @iglesiasg | pickle27, let me check if there was already any of them somewhere | 17:36 |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:36 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:36 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:36 |
| @wiking | OH NOES, 404. | 17:36 |
| @wiking | We seem to have missed the gist of that gist you were looking for. | 17:36 |
| @wiking | :( | 17:36 |
| shogun-buildbot | build #1388 of bsd1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1388 | 17:36 |
| @wiking | ok i need jinja2 | 17:36 |
| @sonney2k | wiking, looks like jinja2 is not a typical python package had to install it on cygwin manually too | 17:37 |
| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:38 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:38 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:38 |
| @sonney2k | wiking, that one? https://gist.github.com/lambday/6211595 | 17:38 |
| shogun-buildbot | build #1389 of bsd1 - libshogun is complete: Failure [failed install] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1389 | 17:38 |
| @iglesiasg | pickle27, there seems to be a doc/ipython-notebooks/ | 17:38 |
| lambday_ | wiking: did a ctest -D Experimental... it showed Cannot find file: /data/rahul/shogun/build/DartConfiguration.tcl | 17:38 |
| @iglesiasg | pickle27, it seems reasonable :) | 17:38 |
| @wiking | lambday_: then there's a problem with your repo | 17:39 |
| @wiking | lambday_: just a sec | 17:39 |
| pickle27 | iglesiasg: ah that there is | 17:39 |
| pickle27 | iglesiasg: I'll put it in there then | 17:39 |
| @iglesiasg | pickle27, cool | 17:39 |
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| @sonney2k | wiking, make isntall?gmake: *** No rule to make target `install'. Stop. | 17:40 |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:40 |
| shogun-buildbot | build forced [ETA 8m25s] | 17:40 |
| shogun-buildbot | I'll give a shout when the build finishes | 17:40 |
| @wiking | sonney2k: yeye just a sec | 17:40 |
| shogun-buildbot | build #1390 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1390 | 17:40 |
| @sonney2k | wiking, ok you do the fixes | 17:41 |
| @wiking | mmm | 17:41 |
| @sonney2k | wiking, one more question - how do I specify where to install shoguN? | 17:41 |
| @wiking | cd build && make -j 4 | 17:41 |
| @wiking | sonney2k: with prefix path | 17:41 |
| @wiking | sonney2k: CMAKE_INSTALL_PREFIX | 17:42 |
| @wiking | sonney2k: -DCMAKE_INSTALL_PREFIX=/whatever/prefix/ | 17:42 |
| @sonney2k | wiking, ohh man we need that all documented. It will take me a while to get used to that | 17:44 |
| @sonney2k | wiking, do we have a DESTDIR variable too to change the $ROOT? | 17:44 |
| @wiking | mmm no clue what u r talking abou tnow :) | 17:44 |
| @sonney2k | hah | 17:45 |
| @sonney2k | http://www.cmake.org/Wiki/CMake_FAQ#Does_CMake.27s_.22make_install.22_support_DESTDIR.3F | 17:45 |
| shogun-buildbot | build #1391 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1391 blamelist: Soeren Sonnenburg <sonne@debian.org> | 17:48 |
| -!- iglesiasg [~iglesias@2001:6b0:1:1da0:99ff:382a:7cf7:c302] has quit [Quit: Ex-Chat] | 17:48 | |
| @sonney2k | wiking ^^ | 17:48 |
| @sonney2k | wiking, is this gmake vs make? | 17:48 |
| @sonney2k | ohh | 17:48 |
| @sonney2k | gtg | 17:48 |
| shogun-buildbot | build #1188 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1188 blamelist: Soeren Sonnenburg <sonne@debian.org> | 17:49 |
| shogun-buildbot | build #866 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/866 blamelist: Soeren Sonnenburg <sonne@debian.org> | 17:49 |
| shogun-buildbot | build #1487 of deb3 - modular_interfaces is complete: Failure [failed compile python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1487 blamelist: Soeren Sonnenburg <sonne@debian.org> | 17:49 |
| -!- shogun-buildbot [~shogun-bu@7nn.de] has quit [Quit: buildmaster reconfigured: bot disconnecting] | 17:56 | |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:56 |
| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:56 |
| @wiking | comeon | 17:56 |
| lambday_ | sonney2k: wiking: I'll be back after dinner.. ATLAS detection is not there yet, right? | 17:57 |
| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 17:57 |
| @wiking | shogun-buildbot force build --branch=develop 'bsd1 - libshogun' | 17:57 |
| @wiking | lambday_: indeed | 17:57 |
| @wiking | shogun-buildbot_: force build --branch=develop 'bsd1 - libshogun' | 17:58 |
| shogun-buildbot_ | build forced [ETA 8m25s] | 17:58 |
| shogun-buildbot_ | I'll give a shout when the build finishes | 17:58 |
| lambday_ | wiking: so that's why cblas isn't working | 17:58 |
| shogun-buildbot_ | build #1392 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1392 | 17:58 |
| lambday_ | brb | 17:59 |
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| thoralf | Did someone made changes to StreamingSparseFeatures or streaming/ParseBuffer? I'm getting "Invalid free() / delete / delete[] / realloc()" in valgrind when reading the first example... | 18:01 |
| thoralf | Last week it worked without warnings - and I did not change anything in my code. | 18:02 |
| shogun-notifier- | shogun: Viktor Gal :develop * 7baf712 / cmake/ (3 files): https://github.com/shogun-toolbox/shogun/commit/7baf71289386c8402697fd2eac3f051bdc437684 | 18:13 |
| shogun-notifier- | shogun: Use same compilers for the external projects as for shogun | 18:13 |
| @wiking | shogun-buildbot_: force build --branch=develop 'bsd1 - libshogun' | 18:14 |
| shogun-buildbot_ | build forced [ETA 8m25s] | 18:14 |
| shogun-buildbot_ | I'll give a shout when the build finishes | 18:14 |
| shogun-buildbot_ | build #1393 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1393 | 18:14 |
| shogun-buildbot_ | build #1394 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1394 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:19 |
| shogun-buildbot_ | build #1189 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1189 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:20 |
| shogun-buildbot_ | build #867 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/867 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:20 |
| shogun-buildbot_ | build #1373 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1373 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:24 |
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| shogun-buildbot_ | build #1488 of deb3 - modular_interfaces is complete: Failure [failed compile python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1488 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:26 |
| shogun-buildbot_ | build #1372 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1372 blamelist: Soeren Sonnenburg <sonne@debian.org> | 18:29 |
| shogun-notifier- | shogun: Viktor Gal :develop * 98380b3 / cmake/ (3 files): https://github.com/shogun-toolbox/shogun/commit/98380b322004796b058d74d6c24b9f0dad1bff80 | 18:30 |
| shogun-notifier- | shogun: Rename compilre finder macro to GetCompilers | 18:30 |
| shogun-notifier- | shogun: and in case of ccache check for CCACHE_FOUND AND ENABLE_CCACHE macros | 18:30 |
| @wiking | shogun-buildbot_: force build --branch=develop 'bsd1 - libshogun' | 18:32 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10119434 | 18:32 |
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| shogun-buildbot_ | build forced [ETA 8m25s] | 18:33 |
| shogun-buildbot_ | I'll give a shout when the build finishes | 18:33 |
| shogun-buildbot_ | build #1395 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1395 | 18:33 |
| @iglesiasg | pickle27, hey! | 18:34 |
| @iglesiasg | pickle27, could you tell me how can I run your ipython notebook? :) | 18:34 |
| pickle27 | iglesiasg: yeah looking at the PR does nothing eh | 18:35 |
| @iglesiasg | pickle27, hehe indeed | 18:35 |
| shogun-buildbot_ | build #1396 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1396 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:35 |
| pickle27 | iglesiasg: you need to download the files into a directory and run "ipython notebook --pylab inline" in that dir | 18:35 |
| @iglesiasg | pickle27, all right, I will merge it and try it out then | 18:36 |
| @iglesiasg | pickle27, you are ok with merging it ,right? | 18:36 |
| shogun-buildbot_ | build #1190 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1190 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:36 |
| pickle27 | iglesiasg: yeah absolutely | 18:36 |
| shogun-buildbot_ | build #868 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/868 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:36 |
| shogun-notifier- | shogun: Kevin :develop * f9bf7eb / doc/ipython-notebooks/bss/ (4 files): https://github.com/shogun-toolbox/shogun/commit/f9bf7ebd52f7536a552b28f8a87202072c0d89b0 | 18:37 |
| shogun-notifier- | shogun: bss audio ipython notebook initial commit | 18:37 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * cc6ae8e / doc/ipython-notebooks/bss/ (4 files): https://github.com/shogun-toolbox/shogun/commit/cc6ae8ef03dcddbb0957714b23f23a86680f2d5d | 18:37 |
| shogun-notifier- | shogun: Merge pull request #1392 from pickle27/develop | 18:37 |
| shogun-notifier- | shogun: | 18:37 |
| shogun-notifier- | shogun: bss audio ipython notebook initial commit | 18:37 |
| shogun-buildbot_ | build #1489 of deb3 - modular_interfaces is complete: Failure [failed compile python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1489 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:37 |
| pickle27 | iglesiasg: I don't remember but I think Heiko had a plan for hosting them live | 18:37 |
| @iglesiasg | pickle27, yes | 18:37 |
| @iglesiasg | wiking, hi! | 18:41 |
| @iglesiasg | wiking, my build crashes with undefined references to cblas_* stuff | 18:42 |
| @iglesiasg | maybe something related with the last changes to cmake? | 18:42 |
| @wiking | iglesiasg: no not really or i have no idea | 18:43 |
| @wiking | fixes are coming up | 18:43 |
| @wiking | until then i cannot say anything | 18:43 |
| @wiking | there's just too much to handle | 18:43 |
| @iglesiasg | wiking, ok | 18:43 |
| @wiking | if u think i should look at it | 18:43 |
| @iglesiasg | sure, no worries | 18:43 |
| @wiking | ctest -D Experimental | 18:43 |
| shogun-buildbot_ | build #1397 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1397 blamelist: Kevin <kevinhughes27@gmail.com> | 18:44 |
| shogun-buildbot_ | build #1191 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1191 blamelist: Kevin <kevinhughes27@gmail.com> | 18:45 |
| shogun-buildbot_ | build #869 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/869 blamelist: Kevin <kevinhughes27@gmail.com> | 18:45 |
| shogun-buildbot_ | build #1398 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1398 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 18:46 |
| pickle27 | iglesiasg: did you try to do a clean | 18:46 |
| shogun-buildbot_ | build #1192 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1192 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 18:47 |
| shogun-buildbot_ | build #870 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/870 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 18:47 |
| @iglesiasg | pickle27, I am on it atm | 18:51 |
| shogun-buildbot_ | build #1375 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1375 blamelist: Kevin <kevinhughes27@gmail.com> | 18:51 |
| shogun-buildbot_ | build #1490 of deb3 - modular_interfaces is complete: Failure [failed compile python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1490 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 18:53 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10121204 | 18:56 |
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| shogun-buildbot_ | build #1376 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1376 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 18:59 |
| shogun-buildbot_ | build #1374 of deb2 - static_interfaces is complete: Failure [failed test python_static] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1374 blamelist: Viktor Gal <viktor.gal@maeth.com> | 19:15 |
| @wiking | pickle27: we have a problem with your octave example | 19:16 |
| pickle27 | wiking: what is it | 19:16 |
| @wiking | pickle27: no idea :) | 19:16 |
| @wiking | it segfaults | 19:17 |
| pickle27 | wiking: static or modular? | 19:17 |
| @wiking | modular | 19:17 |
| @wiking | pickle27: https://travis-ci.org/shogun-toolbox/shogun/jobs/10121213#L2826 | 19:17 |
| shogun-notifier- | shogun: Viktor Gal :develop * a3a1930 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/a3a1930cd781ee63622dec63e829f19177303e6c | 19:19 |
| shogun-notifier- | shogun: Fix RELEASE_COMPILER_FLAGS for clang | 19:19 |
| shogun-notifier- | shogun: Viktor Gal :develop * 35fd456 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/35fd456eb3cd28dab224d7b8a97a480b7b3414b8 | 19:19 |
| shogun-notifier- | shogun: Add work around for FreeBSD -march=native bug | 19:19 |
| pickle27 | wiking: weird thats not even shogun code but just my octave stuff crashing | 19:20 |
| pickle27 | wiking: did we switch octave versions? Im wondering if octave "std" has changed functionality | 19:20 |
| pickle27 | wiking: yeah Im octave 3.6.4 that might be whats wrong | 19:21 |
| @wiking | pickle27: it's 3.2 | 19:21 |
| @wiking | that's the default on that ubunut | 19:21 |
| pickle27 | wiking: LTS? Im on mint 15 and I got my octave from aptitude | 19:21 |
| @wiking | shogun-buildbot_: force build --branch=develop 'bsd1 - libshogun' | 19:21 |
| shogun-buildbot_ | build forced [ETA 8m25s] | 19:21 |
| shogun-buildbot_ | I'll give a shout when the build finishes | 19:21 |
| @wiking | pickle27: yep | 19:21 |
| shogun-buildbot_ | build #1733 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1733 blamelist: Viktor Gal <viktor.gal@maeth.com> | 19:22 |
| pickle27 | wiking: okay I'll take a look at re-writing that line to be compatible | 19:22 |
| shogun-buildbot_ | build #1399 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1399 | 19:23 |
| shogun-buildbot_ | build #1732 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1732 blamelist: Viktor Gal <viktor.gal@maeth.com> | 19:27 |
| @sonney2k | shogun-buildbot_, force build --branch=develop "deb1 - libshogun" | 19:51 |
| shogun-buildbot_ | build forced [ETA 2m25s] | 19:51 |
| shogun-buildbot_ | I'll give a shout when the build finishes | 19:51 |
| shogun-buildbot_ | build #1734 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1734 | 19:52 |
| -!- lambday [67157e36@gateway/web/freenode/ip.103.21.126.54] has joined #shogun | 19:57 | |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 5e2939b / / (33 files): https://github.com/shogun-toolbox/shogun/commit/5e2939b0a1dd7651ab18d7991c7ac58710594cac | 19:59 |
| shogun-notifier- | shogun: move AUTHORS and other files to root dir | 19:59 |
| shogun-buildbot_ | build #1735 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1735 blamelist: Soeren Sonnenburg <sonne@debian.org> | 20:02 |
| lambday | wiking: the cblas thing persists :( | 20:02 |
| @wiking | lambday: fire a bug plz | 20:03 |
| -!- zxtx_ [~zv@cpe-75-83-151-252.socal.res.rr.com] has quit [Ping timeout: 264 seconds] | 20:03 | |
| lambday | wiking: I did a rebase and it still says Cannot find file: /data/rahul/shogun/build/DartConfiguration.tcl when I try ctest -D Experimental | 20:04 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 2fe456c / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/2fe456c34820ea539ccade2a3ef9784fc4b3bcd6 | 20:05 |
| shogun-notifier- | shogun: fix path to NEWS | 20:05 |
| @wiking | lambday: yes make a bug | 20:06 |
| lambday | wiking: alright | 20:06 |
| shogun-buildbot_ | build #1736 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1736 blamelist: Soeren Sonnenburg <sonne@debian.org> | 20:06 |
| shogun-notifier- | shogun: Kevin :develop * 342c108 / doc/ipython-notebooks/bss/bss_jade.ipynb: https://github.com/shogun-toolbox/shogun/commit/342c108c357b446e517575c51d9dfaa914cdd548 | 20:08 |
| shogun-notifier- | shogun: bss ipython notebook, fixed some text | 20:08 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * e960647 / doc/ipython-notebooks/bss/bss_jade.ipynb: https://github.com/shogun-toolbox/shogun/commit/e960647aaeab916d3559421f17f1e24507d61a50 | 20:08 |
| shogun-notifier- | shogun: Merge pull request #1393 from pickle27/develop | 20:08 |
| shogun-notifier- | shogun: | 20:08 |
| shogun-notifier- | shogun: bss ipython notebook, fixed some text | 20:08 |
| lambday | wiking: https://github.com/shogun-toolbox/shogun/issues/1394 | 20:09 |
| @wiking | ok | 20:09 |
| @wiking | i'll check it out | 20:09 |
| lambday | meanwhile I can carry on with configure? | 20:10 |
| @wiking | lambday: well yes but you'll hav etroubles with the unit test | 20:10 |
| lambday | oh | 20:10 |
| lambday | alright | 20:10 |
| lambday | I will check them separately and then add them then | 20:11 |
| shogun-buildbot_ | build #1738 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1738 blamelist: Soeren Sonnenburg <sonne@debian.org> | 20:11 |
| shogun-buildbot_ | build #1737 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1737 blamelist: Kevin <kevinhughes27@gmail.com> | 20:12 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10121868 | 20:18 |
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| @sonney2k | wiking, can one actually somehow display the real build command? | 20:21 |
| @sonney2k | wiking, otherwise it is hard to debug what lambday / iglesiasg's cblas problem is caused by | 20:21 |
| lisitsyn | sonney2k: yes it is stored in some .txt | 20:22 |
| lambday | oh iglesiasg had similar problem | 20:22 |
| @sonney2k | lambday, same one | 20:22 |
| lambday | hmm | 20:22 |
| @sonney2k | lisitsyn, cannot find it | 20:23 |
| lisitsyn | sonney2k: hmm me too | 20:24 |
| @sonney2k | wiking, any ideas? | 20:24 |
| @wiking | about? | 20:25 |
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| @sonney2k | wiking, showing the exact command line of what gcc is doing | 20:26 |
| -!- shogun-buildbot [~shogun-bu@7nn.de] has joined #shogun | 20:26 | |
| @sonney2k | cmake hides it currently | 20:26 |
| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 20:26 |
| shogun-buildbot | build forced [ETA 8m25s] | 20:26 |
| shogun-buildbot | I'll give a shout when the build finishes | 20:26 |
| @sonney2k | and so we don't see why we have a linker error | 20:27 |
| @wiking | sonney2k: shogun/lib/config.h | 20:27 |
| @sonney2k | VERBOSE=1 make | 20:27 |
| @wiking | sonney2k: it's stored as a macro | 20:27 |
| @sonney2k | lambday, please compile again with VERBOSE=1 make | 20:27 |
| @wiking | define COMPFLAGS_CPP | 20:27 |
| @wiking | define LINKFLAGS | 20:27 |
| @sonney2k | and then the last line should be then one we can figure out | 20:27 |
| @sonney2k | what is wrong | 20:28 |
| lambday | sonney2k: okay I am trying | 20:29 |
| @sonney2k | wiking, so it is still creating stuff under src/ ? I thought you did this all in the build dir now? | 20:30 |
| @sonney2k | ahh no it is using src | 20:31 |
| @wiking | sonney2k: config.h and versionstring.h and class_list.cpp is generated under src | 20:31 |
| shogun-buildbot | build #1400 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1400 | 20:33 |
| @sonney2k | wiking, ok. | 20:33 |
| @wiking | there we go | 20:34 |
| @wiking | having the same error as lambday | 20:34 |
| @wiking | on bsd bot | 20:34 |
| @sonney2k | wiking, VERBOSE=1 make ... | 20:35 |
| @sonney2k | I suspect it is not being linked against cblas | 20:35 |
| @wiking | sonney2k: nono it's something else even... | 20:36 |
| lambday | sonney2k: wiking: added verbose output to the gist: https://gist.github.com/lambday/6211595, file cmake-verbose.log | 20:36 |
| @sonney2k | lambday, you don't happen to have the full log? This one is not helping. I need the line where libshogun is linked | 20:39 |
| lambday | this should use -L/usr/lib64/atlas/liblapack.so instead of -llapack | 20:39 |
| lambday | sonney2k: yes alright I am posting | 20:39 |
| @sonney2k | lambday, might be another issue but it currently doesn't find symbols that are in cblas.so | 20:39 |
| lambday | -llapack picks the /usr/lib64/liblapack.so instead of /usr/lib64/atlas/liblapack.so | 20:40 |
| lambday | sonney2k: I am pasitng the full log | 20:40 |
| lambday | sonney2k: https://gist.github.com/lambday/6211595, full-log.log | 20:47 |
| lambday | its not full but might be helpful, full is too big | 20:48 |
| @sonney2k | wiking, it indeed is just missing -lcblas | 20:50 |
| @sonney2k | wiking, it has -llapack and -lblas but -lcblas is missing | 20:51 |
| @wiking | sonney2k: #TODO: write ATLAS detection | 20:51 |
| @sonney2k | wiking, not atlas - cblas | 20:51 |
| @wiking | sonney2k: ok then what i should detect since it seeems | 20:51 |
| @wiking | that FindBLAS.cmake that comes with cmake | 20:52 |
| @wiking | does something wrong | 20:52 |
| @wiking | or that our MACRO tests for cblas is not the best... | 20:52 |
| @sonney2k | wiking, the way I handled it with configure was to check if lapack, blas / cblas where found then enable HAVE_* stuff | 20:52 |
| @sonney2k | wiking, no blas != cblas | 20:52 |
| @sonney2k | wiking, this needs some extra checks for the cblas functions | 20:52 |
| @wiking | hahaha | 20:55 |
| @wiking | lol*** glibc detected *** /home/travis/build/shogun-toolbox/shogun/build/tests/unit/shogun-unit-test: malloc(): memory corruption (fast): 0x0000000001992900 *** | 20:55 |
| @wiking | soembody fucked up the unit tests | 20:55 |
| @wiking | big time | 20:55 |
| lisitsyn | pickle27: awesome thing with audio | 20:55 |
| van51 | sonney2k: can you take a look at this commit : https://github.com/van51/shogun/commit/dedec4c76235d26e900143f40e443a4efdec4571 ? | 20:56 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10122140 | 20:57 |
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| van51 | sonney2k: I believe it solves the issue I was having with the multiple threads | 20:57 |
| van51 | sonney2k: at least when I changed the int32_t refcount to atomic int in those classes, temporarily, it worked | 20:57 |
| van51 | sonney2k: I would like to know if I'm on the right track or if there is some reason against it | 20:58 |
| van51 | sonney2k: also here are some results on the lang detection w/ and w/o quadratic : https://gist.github.com/van51/6213951 | 21:01 |
| @sonney2k | van51, ohh f...! | 21:01 |
| @sonney2k | van51, you could be right | 21:01 |
| @sonney2k | indeed io objects are not thread safe etc | 21:02 |
| @sonney2k | van51, but where is this done in parallel? | 21:02 |
| van51 | sonney2k: from what I understand it's a problem in my dense_dot method because I'm creating and destroying multiple shogun objects that call CSGObject() and ~CSGObject() in parallel | 21:06 |
| van51 | sonney2k: here are some helgrind outputs that show some race conditions : http://pastebin.com/tMYjpKn2 | 21:06 |
| @sonney2k | van51, ok | 21:10 |
| @sonney2k | van51, good catch then! tough one!!! | 21:11 |
| @sonney2k | van51, I hereby name you hero of the day! | 21:11 |
| van51 | :) | 21:12 |
| lisitsyn | sonney2k: what happens? | 21:12 |
| @sonney2k | lisitsyn, we have a race condition when one creates SGObjects in multiple threads | 21:13 |
| lisitsyn | sonney2k: ahh with our shared objects? | 21:13 |
| @sonney2k | van51, found & fixed it | 21:13 |
| lisitsyn | parallel, version etc? | 21:14 |
| @sonney2k | lisitsyn, yes | 21:14 |
| lisitsyn | ha-ha | 21:14 |
| lisitsyn | it is clear when you know about it | 21:14 |
| @sonney2k | yeah... | 21:14 |
| @sonney2k | it always is | 21:14 |
| lisitsyn | never thought about it | 21:14 |
| @sonney2k | me neither | 21:14 |
| lisitsyn | no sometimes you find a bug and it finds a bug in a glitch of a bug | 21:14 |
| lisitsyn | sonney2k: how to fix it? | 21:15 |
| van51 | it needs a bit more work in that commit because it's not compiling as is | 21:15 |
| van51 | and I g2g in a bit | 21:15 |
| van51 | I'll send a PR tonight though that you can comment and review :) | 21:15 |
| @sonney2k | wiking, I am totally lost with cmake ATM | 21:20 |
| lisitsyn | sonney2k: what's it? | 21:21 |
| lisitsyn | anything particular? | 21:21 |
| @sonney2k | lisitsyn, cblas / atlas detection doesn't work | 21:22 |
| @sonney2k | lisitsyn, so it fails to compile on iglesiasg & lambday's machine | 21:22 |
| @sonney2k | lisitsyn, then the -Wwarnme stuff should be disabled with clang | 21:23 |
| @wiking | sonney2k: no the warnme should not be as it's now fixed | 21:23 |
| @sonney2k | lisitsyn, and we need static interfaces back | 21:23 |
| @sonney2k | wiking, ahh cool | 21:23 |
| @wiking | sonney2k: i've removed cflags that are not working with clang | 21:23 |
| van51 | cu later | 21:23 |
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| @wiking | btw why do we assume that lapack -> cblash.h ? | 21:24 |
| @wiking | *cblas.h | 21:24 |
| @sonney2k | wiking, so you remove them dynamically or was this just a workaround for now? | 21:24 |
| @wiking | sonney2k: no i removed it in cmake | 21:24 |
| @sonney2k | wiking, we only want one big pacakge | 21:24 |
| @wiking | sonney2k: ? | 21:24 |
| @sonney2k | wiking, well so the issue is still there since we want these warnings | 21:24 |
| @wiking | eh? | 21:24 |
| @wiking | no | 21:24 |
| @wiking | it's not about that | 21:24 |
| @sonney2k | wiking, lapack+atlas+cblas | 21:24 |
| @sonney2k | wiking, what then? | 21:25 |
| @wiking | it's about that RELEASE flags has been changed | 21:25 |
| @wiking | for clang | 21:25 |
| @wiking | as there's quite some optimization flags that are not supported in clang | 21:25 |
| @wiking | hence i've removed those | 21:25 |
| @wiking | so we won't have those errors | 21:25 |
| @wiking | and wtf is this: lapack+atlas+cblas | 21:25 |
| @sonney2k | wiking, but with gcc we still have them then right? | 21:25 |
| @wiking | sonney2k: yes with gcc yes | 21:25 |
| @sonney2k | ok | 21:25 |
| @wiking | lapack needs blas | 21:26 |
| @wiking | and for that there's a cmake test | 21:26 |
| @wiking | but that has nothing to do with cblas | 21:26 |
| lisitsyn | wiking: oob, right? | 21:26 |
| @wiking | and currently in our code we say | 21:26 |
| @wiking | HAVE_LAPACK -> cblas | 21:26 |
| @wiking | lisitsyn: ? | 21:26 |
| @sonney2k | wiking, exactly | 21:26 |
| lisitsyn | wiking: out of the box I mean | 21:26 |
| @wiking | no | 21:26 |
| lisitsyn | wiking: do we have our own? | 21:26 |
| @wiking | why HAVE_LAPACK means that we have cblas | 21:26 |
| @wiking | lisitsyn: nono it's cmake default module | 21:27 |
| lisitsyn | wiking: yes that's what I meant | 21:27 |
| @wiking | having lapack is one thing... but then we should not call it fucking HAVE_LAPACK | 21:27 |
| @sonney2k | wiking, because no one wants to write .h files for blas | 21:27 |
| @wiking | we should call it HAVE_CBLAS | 21:27 |
| @wiking | and that's it | 21:27 |
| @sonney2k | wiking, then you pretend something would be working with cblas not available | 21:28 |
| lisitsyn | git grep HAVE_LAPACK | wc -l | 21:29 |
| lisitsyn | 195 | 21:29 |
| lisitsyn | :D | 21:29 |
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| shogun-notifier- | shogun-demo: Zhengyang Liu :master * bd46f4a / / (13 files): https://github.com/shogun-toolbox/shogun-demo/commit/bd46f4acb4048fcefb02925298026f70c063576b | 21:35 |
| shogun-notifier- | shogun-demo: 1. add half finished d3 tree visualization module. 2. move some init | 21:35 |
| shogun-notifier- | shogun-demo: code for tapkee demo to django app startup to reduce runtime time cost. | 21:35 |
| shogun-notifier- | shogun-demo: 3. add popup explanation to argument panel | 21:35 |
| shogun-notifier- | shogun-demo: Soeren Sonnenburg :master * c6c9fb6 / / (13 files): https://github.com/shogun-toolbox/shogun-demo/commit/c6c9fb67435f82a289b9f47025e2769d781b1fe9 | 21:35 |
| shogun-notifier- | shogun-demo: Merge pull request #20 from ZhengyangL/master | 21:35 |
| shogun-notifier- | shogun-demo: | 21:35 |
| shogun-notifier- | shogun-demo: tree & tapkee & argument popup explanation | 21:35 |
| @iglesiasg | lambday, is cblas solved for you? | 21:54 |
| @wiking | iglesiasg: /home/wiking/shogun/build/GoogleMock/src/GoogleMock/gtest/include/gtest/gtest.h: In function 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int, T2 = int]': | 21:55 |
| @iglesiasg | wiking, what is it? | 21:56 |
| @wiking | dunno | 21:56 |
| @wiking | it's your unittest | 21:56 |
| lisitsyn | wiking: we need next line I think! | 21:56 |
| @wiking | just a sec | 21:57 |
| @wiking | trying to regen | 21:57 |
| @wiking | 73%] Building CXX object tests/unit/CMakeFiles/shogun-unit-test.dir/metric/LMNNImpl_unittest.cc.o | 21:57 |
| @wiking | In file included from /home/wiking/shogun/tests/unit/metric/LMNNImpl_unittest.cc:13:0: | 21:57 |
| @wiking | /home/wiking/shogun/build/GoogleMock/src/GoogleMock/gtest/include/gtest/gtest.h: In function 'testing::AssertionResult testing::internal::CmpHelperEQ(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int, T2 = int]': | 21:57 |
| @wiking | /home/wiking/shogun/build/GoogleMock/src/GoogleMock/gtest/include/gtest/gtest.h:1485:30: instantiated from 'static testing::AssertionResult testing::internal::EqHelper<lhs_is_null_literal>::Compare(const char*, const char*, const T1&, const T2&) [with T1 = long unsigned int, T2 = int, bool lhs_is_null_literal = false]' | 21:57 |
| @wiking | /home/wiking/shogun/tests/unit/metric/LMNNImpl_unittest.cc:180:2: instantiated from here | 21:57 |
| @wiking | /home/wiking/shogun/build/GoogleMock/src/GoogleMock/gtest/include/gtest/gtest.h:1448:3: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] | 21:57 |
| @iglesiasg | wiking, oops | 21:59 |
| lisitsyn | so many words to say virtually nothing :D pure C++ warnings | 21:59 |
| @iglesiasg | I probably didn't check for warnings | 21:59 |
| @iglesiasg | lisitsyn, indeed! | 21:59 |
| @wiking | libshogun-evaluation_cross_validation_multiclass ...................***Exception: Other 0.04 sec | 22:00 |
| @wiking | terminate called after throwing an instance of 'shogun::ShogunException' | 22:00 |
| @wiking | dunno who changed this.. | 22:00 |
| @wiking | [ERROR] In file /home/wiking/shogun/src/shogun/io/File.cpp line 53: Error opening file '../data/fm_train_real.dat' | 22:00 |
| @wiking | ah ok sorry | 22:00 |
| @wiking | this is my fault | 22:00 |
| shogun-notifier- | shogun: Viktor Gal :develop * 56e91c3 / CMakeLists.txt,cmake/CheckCXX11Features.cmake,cmake/external/Eigen3.cmake: https://github.com/shogun-toolbox/shogun/commit/56e91c32457f917be768e88bca26479213aa8355 | 22:01 |
| shogun-notifier- | shogun: Only disable -march=native on FreeBSD if using clang | 22:01 |
| shogun-notifier- | shogun: Properly unset _HAS_CXX0X_FLAG variable in cmake | 22:01 |
| shogun-notifier- | shogun: remove debugging message from cmake/external/Eigen3.cmake | 22:01 |
| shogun-notifier- | shogun: Viktor Gal :develop * 308112b / CMakeLists.txt,src/shogun/mathematics/lapack.h,cmake/FindCBLAS.cmake: https://github.com/shogun-toolbox/shogun/commit/308112bb00337316f51c3bc72fc6e82fa2fd6ca7 | 22:01 |
| shogun-notifier- | shogun: Add FindCBLAS | 22:01 |
| shogun-notifier- | shogun: only define HAVE_LAPACK if CBLAS is found, see issue #1394 | 22:01 |
| shogun-notifier- | shogun: fix c++11 with Accelerate framework | 22:01 |
| @wiking | lambday: try with this | 22:01 |
| shogun-buildbot | build #1740 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1740 blamelist: Viktor Gal <viktor.gal@maeth.com> | 22:02 |
| shogun-buildbot | build #1739 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1739 blamelist: Viktor Gal <viktor.gal@maeth.com> | 22:03 |
| @iglesiasg | trying here too | 22:03 |
| -!- lambday [67157e36@gateway/web/freenode/ip.103.21.126.54] has quit [Ping timeout: 250 seconds] | 22:04 | |
| @wiking | shogun-buildbot force build --branch=develop 'bsd1 - libshogun' | 22:04 |
| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 22:05 |
| shogun-buildbot | build forced [ETA 8m25s] | 22:05 |
| shogun-buildbot | I'll give a shout when the build finishes | 22:05 |
| @wiking | https://github.com/shogun-toolbox/shogun/issues/1395 | 22:09 |
| @wiking | gsomix_: ^ | 22:09 |
| gsomix_ | wiking, strange | 22:10 |
| @wiking | gsomix_: fixit ;0 | 22:11 |
| @wiking | gsomix_: it segfaults like everywhere | 22:11 |
| gsomix_ | wiking, first I should reproduce it. | 22:11 |
| @wiking | gsomix_: any machine will do it for ya | 22:11 |
| @iglesiasg | anyone getting problems compiling libshogun/conjugate_index.cpp?? | 22:11 |
| @wiking | sonney2k: how's that osx buildbot? | 22:11 |
| @wiking | iglesiasg: not me | 22:12 |
| shogun-buildbot | build #1401 of bsd1 - libshogun is complete: Failure [failed install] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1401 | 22:12 |
| @wiking | mmm wtf is this error: Unknown modifier '%' | 22:12 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10124965 | 22:12 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10123636 | 22:14 |
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| gsomix_ | wiking, btw how can I compile shogun? | 22:14 |
| @iglesiasg | gsomix_, nice question! :) | 22:15 |
| @iglesiasg | gsomix_, are you getting some error? | 22:15 |
| gsomix_ | nope, I just haven't configure and make in my shogun/src directory | 22:16 |
| gsomix_ | *makefile | 22:16 |
| @iglesiasg | gsomix_, you using cmake? | 22:16 |
| @iglesiasg | you should otherwise | 22:16 |
| gsomix_ | nope | 22:16 |
| gsomix_ | aww, | 22:16 |
| gsomix_ | okay | 22:17 |
| @wiking | iglesiasg: so cblas fixed for ya? | 22:17 |
| @iglesiasg | wiking, yep | 22:17 |
| gsomix_ | I'm slowpoke | 22:17 |
| @iglesiasg | conjugate index start failing so I just deactivated making examples | 22:17 |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 22:18 |
| shogun-buildbot | build forced [ETA 8m25s] | 22:18 |
| shogun-buildbot | I'll give a shout when the build finishes | 22:18 |
| @wiking | lisitsyn: what has happened with the new INSTALL file? :) | 22:21 |
| lisitsyn | wiking: I am on it | 22:23 |
| lisitsyn | I am slow ya know | 22:23 |
| lisitsyn | wiking: what are defaults for interfaces? | 22:25 |
| lisitsyn | all on? | 22:25 |
| shogun-buildbot | build #1402 of bsd1 - libshogun is complete: Failure [failed install test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1402 | 22:25 |
| @wiking | ok cool bsd1 bot is almost done | 22:26 |
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| @wiking | shogun-buildbot: force build --branch=develop 'bsd1 - libshogun' | 22:29 |
| shogun-buildbot | build forced [ETA 8m25s] | 22:29 |
| shogun-buildbot | I'll give a shout when the build finishes | 22:29 |
| @wiking | should be fine now... | 22:29 |
| gsomix_ | iglesiasg, ok. cmake is installed. | 22:30 |
| gsomix_ | what next? :) | 22:30 |
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| gsomix_ | iglesiasg_, hey | 22:35 |
| iglesiasg_ | gsomix_, sup | 22:35 |
| gsomix_ | iglesiasg_, I'm little confused with cmake. so, now cmake is installed. what's next? | 22:36 |
| gsomix_ | can you help me a little? | 22:36 |
| iglesiasg_ | gsomix_, sure | 22:36 |
| iglesiasg_ | gsomix_, head CMakeLists.txt | 22:36 |
| shogun-buildbot | build #1403 of bsd1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1403 | 22:37 |
| iglesiasg_ | so basically do mkdir build in your root shogun directory | 22:37 |
| iglesiasg_ | cd build | 22:37 |
| iglesiasg_ | cmake .. | 22:37 |
| iglesiasg_ | make | 22:37 |
| iglesiasg_ | the last make can be as your usual one | 22:37 |
| iglesiasg_ | make -j2 | 22:37 |
| iglesiasg_ | ccache make -j2 | 22:37 |
| iglesiasg_ | actually this cmake is supposed to do ccache automatically, but it doesn't detect fine for me | 22:37 |
| iglesiasg_ | so I do it manually like that | 22:37 |
| @wiking | ok bsd bot is fixed | 22:38 |
| @wiking | lisitsyn: no... all off | 22:38 |
| gsomix_ | iglesiasg_, thanks! | 22:38 |
| lisitsyn | wiking: gotit | 22:38 |
| gsomix_ | compiling | 22:38 |
| iglesiasg_ | gsomix_, now if you want to configure some things like the ones we could do with configure script, say ./configure --disable-optimization --interfaces= etc | 22:38 |
| iglesiasg_ | gsomix_, you can pass this kind of parameters to cmake .. | 22:39 |
| iglesiasg_ | gsomix_, but I suggest you to use ccmake .. and customize it using the ncurses gui | 22:39 |
| lisitsyn | iglesiasg_: I think I should document it with some priority to ccmake | 22:40 |
| lisitsyn | what do you think? | 22:40 |
| iglesiasg_ | lisitsyn, it sounds like a good idea | 22:40 |
| iglesiasg_ | lisitsyn, say something about ccmake or cmake gui | 22:40 |
| iglesiasg_ | lisitsyn, so people know about eh options | 22:40 |
| lisitsyn | yes I put some words on it | 22:40 |
| iglesiasg_ | lisitsyn, I think that if you basically say use ccmake is enough | 22:40 |
| lisitsyn | yeah | 22:40 |
| iglesiasg_ | I mean, ccmake then gives you all the info | 22:41 |
| @wiking | shogun-buildbot: force build --branch=develop 'deb1 - libshogun' | 22:41 |
| shogun-buildbot | build forced [ETA 2m25s] | 22:41 |
| shogun-buildbot | I'll give a shout when the build finishes | 22:41 |
| shogun-buildbot | build #1741 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1741 | 22:41 |
| pickle27 | iglesiasg_: how do I commit to shogun-data | 22:46 |
| pickle27 | can I do it at the same time as commiting to the main branch | 22:46 |
| lisitsyn | pickle27: no | 22:46 |
| @wiking | iglesiasg_: can u copy-paste here the #define LINKFLAGS line from your ./src/shogun/lib/config.h | 22:46 |
| lisitsyn | pickle27: first data then update data repo reference | 22:46 |
| pickle27 | lisitsyn: okay do I make a separate commit from inside data | 22:46 |
| iglesiasg_ | pickle27, I think it should work in the same way, just make a pull request and so on | 22:46 |
| pickle27 | oh okay | 22:47 |
| iglesiasg_ | #define LINKFLAGS "/usr/lib/libparpack.so;debug;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libbz2.so" | 22:50 |
| iglesiasg_ | wiking, ^ | 22:50 |
| gsomix_ | iglesiasg_, so "Debug" CMAKE_BUILD_TYPE is something "--disable-optimization", right? | 22:50 |
| iglesiasg_ | gsomix_, exactly | 22:51 |
| gsomix_ | what about doxygen? | 22:51 |
| iglesiasg_ | gsomix_, toggle to advanced mode with t | 22:51 |
| iglesiasg_ | gsomix_, use / to search | 22:51 |
| gsomix_ | ow | 22:51 |
| gsomix_ | *wow | 22:52 |
| iglesiasg_ | gsomix_, like /Doxygen | 22:52 |
| iglesiasg_ | gsomix_, I don't actually see any disable doxygen though :D | 22:52 |
| @wiking | iglesiasg_: this is the latest?! | 22:52 |
| iglesiasg_ | wiking, does that exist? | 22:52 |
| iglesiasg_ | wiking, Add FindCBlas is latest commit here | 22:52 |
| @wiking | iglesiasg_: and have u reran a clean cmake? | 22:53 |
| iglesiasg_ | it was lates less than 30 minutes ago for sure :D | 22:53 |
| iglesiasg_ | wiking, let me try | 22:53 |
| iglesiasg_ | wiking, not sure | 22:53 |
| iglesiasg_ | wiking, rm -rf build is enough, right? | 22:54 |
| @wiking | yep should be | 22:54 |
| gsomix_ | iglesiasg_, cool. thanks again. :) | 22:55 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10125203 | 22:55 |
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| iglesiasg_ | gsomix_, you are welcome! | 22:55 |
| -!- iglesiasg_ is now known as iglesiasg | 22:55 | |
| -!- mode/#shogun [+o iglesiasg] by ChanServ | 22:55 | |
| lisitsyn | who modified install | 22:55 |
| lisitsyn | Aahahgha | 22:56 |
| lisitsyn | ahhhhhh | 22:56 |
| lisitsyn | oohh | 22:56 |
| @wiking | lisitsyn: it moved | 22:56 |
| lisitsyn | wiking: ja noticed that | 22:56 |
| @wiking | iglesiasg: now? | 22:56 |
| @iglesiasg | wiking, still broke in conjugate index | 22:58 |
| @iglesiasg | let me show you errors | 22:58 |
| @iglesiasg | I didn't look at them though | 22:58 |
| @iglesiasg | just asked in case | 22:58 |
| lisitsyn | iglesiasg: let me solve that | 22:58 |
| @wiking | iglesiasg: i dont care about that | 22:58 |
| @iglesiasg | maybe it is something trivial | 22:58 |
| @iglesiasg | wiking, eeeh ok interesting | 22:58 |
| @wiking | iglesiasg: what's your linkflags | 22:58 |
| lisitsyn | I have a solution | 22:58 |
| @wiking | define LINKFLAGS | 22:58 |
| @wiking | this is what i want to see | 22:59 |
| @iglesiasg | wiking, #define LINKFLAGS "/usr/lib/libparpack.so;debug;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libbz2.so" | 22:59 |
| @iglesiasg | they look similar to the ones before I think | 22:59 |
| @wiking | iglesiasg: yes | 22:59 |
| @wiking | in the same file | 22:59 |
| @wiking | HAVE_LAPACK is defined? | 23:00 |
| @wiking | or it's undef? | 23:00 |
| @wiking | with /* */ | 23:00 |
| @iglesiasg | wiking, undef with comments | 23:01 |
| gsomix_ | iglesiasg, hm. after make it's installing automagically? btw I should work with unit-tests in old way with simple make? | 23:02 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * 6286f1e / INSTALL: https://github.com/shogun-toolbox/shogun/commit/6286f1eb59953114383ae62d3184878b6d958011 | 23:02 |
| shogun-notifier- | shogun: Some updates for INSTALL | 23:02 |
| @wiking | iglesiasg: ok then somehow the findCBLAS.cmake is not working for you | 23:02 |
| @wiking | iglesiasg: find /usr/ -name 'libcblas*' | 23:02 |
| @wiking | iglesiasg: what's the output of this? | 23:02 |
| @iglesiasg | wiking, /usr/lib/atlas-base/libcblas.so.3gf.0 | 23:03 |
| @iglesiasg | /usr/lib/atlas-base/libcblas.so.3gf | 23:03 |
| @iglesiasg | /usr/lib/libcblas.so.3gf | 23:03 |
| @iglesiasg | gsomix_, you still need to make install to install. No need to do that for tests though | 23:03 |
| @wiking | iglesiasg: ls -la /usr/lib/libcblas.so.3gf | 23:03 |
| @iglesiasg | gsomix_, you do that with ctest | 23:03 |
| @iglesiasg | wiking, lrwxrwxrwx 1 root root 33 Jul 3 12:13 /usr/lib/libcblas.so.3gf -> /etc/alternatives/libcblas.so.3gf | 23:04 |
| @wiking | iglesiasg: ok then: ls -la /etc/alternatives/libcblas.so.3gf | 23:04 |
| shogun-buildbot | build #1742 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1742 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 23:04 |
| @wiking | iglesiasg: btw: do you have something like: Could not find cblas_dsyrk in ${CBLAS_LIBRARY}, take a look at the error message | 23:06 |
| @wiking | as your cmake output? | 23:06 |
| @iglesiasg | wiking, ls -la /etc/alternatives/libcblas.so.3gf | 23:06 |
| @iglesiasg | lrwxrwxrwx 1 root root 35 Jul 3 12:13 /etc/alternatives/libcblas.so.3gf -> /usr/lib/atlas-base/libcblas.so.3gf | 23:06 |
| @iglesiasg | wiking, let me check output now | 23:06 |
| @wiking | hah wtf is this | 23:07 |
| gsomix_ | wiking, iglesiasg http://pastebin.com/t1GkNrbw hm | 23:07 |
| @wiking | gsomix_: apt-get install subversion | 23:07 |
| @iglesiasg | wiking, -- Could NOT find CBLAS (missing: CBLAS_LIBRARY) | 23:07 |
| @wiking | iglesiasg: mmm intersting | 23:07 |
| gsomix_ | I thought it cannot find svn repo | 23:08 |
| @wiking | iglesiasg: dpkg -l|grep atlas | 23:08 |
| @wiking | gsomix_: i said install the subversion | 23:09 |
| @wiking | gsomix_: what linux r u using | 23:09 |
| @wiking | ? | 23:09 |
| @iglesiasg | wiking, ii libatlas3gf-base 3.8.4-3build1 Automatically Tuned Linear Algebra Software, generic shared | 23:09 |
| gsomix_ | wiking, installing | 23:09 |
| @wiking | what is this gf? | 23:09 |
| pickle27 | wiking: I fixed the octave problem - it was a diff between 3.2 and 3.6 | 23:09 |
| @wiking | pickle27: great! | 23:10 |
| @wiking | iglesiasg: dpkg -L libatlas3gf-base | 23:10 |
| pickle27 | I'll make a PR as soon as my latest notebook PR gets merged | 23:10 |
| @wiking | iglesiasg: i guess it does not create a libcblas.so.* | 23:10 |
| pickle27 | iglesiasg: I fixed the data in my notebook if you'd like to merge it | 23:10 |
| @iglesiasg | wiking, http://pastebin.com/Kr1ifZ5e | 23:11 |
| @wiking | ok | 23:11 |
| @iglesiasg | wiking, it creates a libcblas.so.3gf | 23:11 |
| @wiking | so wtf should i do with this | 23:11 |
| @wiking | iglesiasg: yes but wtf is libcblas.so.3gf ? | 23:11 |
| @iglesiasg | wiking, from apt-cache show | 23:12 |
| @iglesiasg | wiking, The libraries in this package are built without any processor extension | 23:12 |
| @iglesiasg | instructions, and should run on all processors of this general | 23:12 |
| @iglesiasg | architecture, albeit less than optimally. | 23:12 |
| shogun-notifier- | shogun: Sergey Lisitsyn :develop * aeb6ce1 / / (10 files): https://github.com/shogun-toolbox/shogun/commit/aeb6ce1fe34018aaa9315b3164778ab4bc623499 | 23:12 |
| shogun-notifier- | shogun: Resolved all the issues with CConjugateIndex | 23:12 |
| lisitsyn | hey guys, I have resolved it | 23:12 |
| @iglesiasg | lisitsyn, cool! | 23:12 |
| lisitsyn | iglesiasg: very straightforward :D | 23:12 |
| @iglesiasg | pickle27, did you remove it from the other repo as well? | 23:12 |
| @wiking | lisitsyn: rotfl | 23:12 |
| @iglesiasg | lisitsyn, yeah, I didn't even look to what the error was honestly :D | 23:13 |
| @wiking | iglesiasg: the problem is that this cblas lib is not picked up... | 23:13 |
| pickle27 | I removed it from shogun and added it to data | 23:13 |
| @iglesiasg | lisitsyn, lol | 23:13 |
| lisitsyn | iglesiasg: no class no troubles | 23:13 |
| @iglesiasg | lisitsyn, I like your fix | 23:13 |
| lisitsyn | iglesiasg: it is untested and won't work anyway | 23:13 |
| shogun-buildbot | build #1743 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1743 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 23:14 |
| @wiking | iglesiasg: your biggest problem is that actually now u dont have HAVE_LAPACK defined | 23:16 |
| @iglesiasg | I see | 23:18 |
| shogun-notifier- | shogun-data: Kevin :master * 98acde1 / ica/PZeRdy00.wav,ica/TMaRdy00.wav,ica/tbawht02.wav: https://github.com/shogun-toolbox/shogun-data/commit/98acde1817c46a6c5c0d320c1243fccffbe43b3f | 23:19 |
| shogun-notifier- | shogun-data: added data for ica bss notebook example | 23:19 |
| shogun-notifier- | shogun-data: Fernando Iglesias :master * 7331f76 / ica/PZeRdy00.wav,ica/TMaRdy00.wav,ica/tbawht02.wav: https://github.com/shogun-toolbox/shogun-data/commit/7331f76d16ef578b2d65242ade80d74f269fa706 | 23:19 |
| shogun-notifier- | shogun-data: Merge pull request #12 from pickle27/master | 23:19 |
| shogun-notifier- | shogun-data: | 23:19 |
| shogun-notifier- | shogun-data: added data for ica bss notebook example | 23:19 |
| @wiking | and i dont know actually why libcblas.so.3gf is not being detected by FindCBLAS.cmake | 23:19 |
| @iglesiasg | pickle27, I missed however the removal in shogun. Anyone merged already that, right? | 23:20 |
| pickle27 | iglesiasg: ooops might not have made a pr | 23:20 |
| @iglesiasg | pickle27, ;) | 23:20 |
| gsomix_ | something wrong with SVMOcas unit-test on my machine. http://pastebin.com/42ztBV5q | 23:23 |
| gsomix_ | ahh | 23:24 |
| gsomix_ | #ifdef HAVE_LAPACK | 23:24 |
| pickle27 | iglesiasg: there we go! | 23:25 |
| @iglesiasg | pickle27, nice thank you! | 23:26 |
| shogun-notifier- | shogun: Kevin :develop * 3c9ec78 / doc/ipython-notebooks/ (5 files): https://github.com/shogun-toolbox/shogun/commit/3c9ec782e12afea8f3a96a793e21825498c4362c | 23:26 |
| shogun-notifier- | shogun: moved ica notebook data to shogun-data, also some small fixes | 23:26 |
| shogun-notifier- | shogun: Kevin :develop * a2c3493 / doc/ipython-notebooks/ica/bss_jade.ipynb: https://github.com/shogun-toolbox/shogun/commit/a2c34934a6830233cd331751ea074ca40ce26a89 | 23:26 |
| shogun-notifier- | shogun: changed citation in jade notebook | 23:26 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 3e8b93a / doc/ipython-notebooks/ (5 files): https://github.com/shogun-toolbox/shogun/commit/3e8b93a5a9c73bac49a21a05509ce467599e48e4 | 23:26 |
| shogun-notifier- | shogun: Merge pull request #1396 from pickle27/develop | 23:26 |
| shogun-notifier- | shogun: | 23:26 |
| shogun-notifier- | shogun: updates to jade ipython notebook | 23:26 |
| gsomix_ | ok, it seems I should start work at tomorrow | 23:26 |
| @iglesiasg | pickle27, I didn't manage to run and check the notebook yet, but I will check tom | 23:26 |
| pickle27 | iglesiasg: sounds good! | 23:27 |
| shogun-buildbot | build #1744 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1744 blamelist: Kevin <kevinhughes27@gmail.com> | 23:30 |
| shogun-buildbot | build #1745 of deb1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1745 | 23:33 |
| shogun-buildbot | build #1491 of deb3 - modular_interfaces is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1491 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 23:33 |
| shogun-buildbot | build #1377 of deb2 - static_interfaces is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb2%20-%20static_interfaces/builds/1377 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 23:34 |
| shogun-buildbot | build #1193 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1193 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 23:34 |
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| @iglesiasg | the buildbot is completely dead :( | 23:40 |
| @iglesiasg | poor guy | 23:40 |
| @wiking | iglesiasg: i dont know why your distro does not create symlink for libcblas.so :( | 23:40 |
| shogun-buildbot | build #1404 of bsd1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/bsd1%20-%20libshogun/builds/1404 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 23:40 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/10125315 | 23:41 |
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| @iglesiasg | me neither honestly | 23:41 |
| @wiking | iglesiasg: if u would have that it would detect cblas | 23:41 |
| @wiking | iglesiasg: afaik it's a distro bug | 23:41 |
| shogun-buildbot | build #871 of rpm1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/rpm1%20-%20libshogun/builds/871 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>, Kevin <kevinhughes27@gmail.com> | 23:42 |
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| @wiking | shogun-buildbot: force build --branch=develop 'deb1 - libshogun' | 23:44 |
| shogun-buildbot | build forced [ETA 16m01s] | 23:44 |
| shogun-buildbot | I'll give a shout when the build finishes | 23:44 |
| shogun-buildbot | build #1746 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1746 | 23:46 |
| @wiking | ok cool on slave4 the deb1 - libshogun is working | 23:47 |
| @wiking | lisitsyn: i'll create a SYSTEM_INCLUDES list for -isystem libs... | 23:50 |
| @wiking | so we can enable -Wshadow again | 23:50 |
| shogun-notifier- | shogun: Kevin :develop * aa628f4 / examples/undocumented/ (2 files): https://github.com/shogun-toolbox/shogun/commit/aa628f436006b80849523b02a15fdbc860fe30a3 | 23:59 |
| shogun-notifier- | shogun: updated Jade octave examples to be compatible with Octave version < 3.6 | 23:59 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * efbd14d / examples/undocumented/ (2 files): https://github.com/shogun-toolbox/shogun/commit/efbd14d2c314e29a2c9a6e3eb554dd2696f1cb33 | 23:59 |
| shogun-notifier- | shogun: Merge pull request #1397 from pickle27/develop | 23:59 |
| shogun-notifier- | shogun: | 23:59 |
| shogun-notifier- | shogun: updated Jade octave examples to be compatible with Octave version < 3.6 | 23:59 |
| --- Log closed Tue Aug 13 00:00:13 2013 | ||
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