| --- Log opened Sun Sep 15 00:00:59 2013 | ||
| shogun-buildbot | build #1815 of deb3 - modular_interfaces is complete: Failure [failed test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1815 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:10 |
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| shogun-buildbot | build #1185 of rpm1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1185 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:15 |
| shogun-buildbot | build #1468 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1468 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:18 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 7058f4e / examples/undocumented/r_modular/ (29 files): https://github.com/shogun-toolbox/shogun/commit/7058f4e1c5d73f1c153b47fda052a466bf4914cc | 00:22 |
| shogun-notifier- | shogun: various fixes for r_modular examples | 00:22 |
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| shogun-buildbot | build #1734 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1734 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:31 |
| shogun-notifier- | shogun-data: Fernando Iglesias :master * c55a430 / toy/fm_train_multiclass_digits.dat.gz,toy/label_train_multiclass_digits.dat: https://github.com/shogun-toolbox/shogun-data/commit/c55a430b4d53e0626b95a746f55f1b5f193dca8a | 00:32 |
| shogun-notifier- | shogun-data: Add multiclass digits data set | 00:32 |
| shogun-notifier- | shogun-data: Soeren Sonnenburg :master * a21b773 / toy/fm_train_multiclass_digits.dat.gz,toy/label_train_multiclass_digits.dat: https://github.com/shogun-toolbox/shogun-data/commit/a21b773f1ad3fd789ee5a1a09405ec7e11915931 | 00:32 |
| shogun-notifier- | shogun-data: Merge pull request #17 from iglesias/master | 00:32 |
| shogun-notifier- | shogun-data: | 00:32 |
| shogun-notifier- | shogun-data: Add multiclass digits data set | 00:32 |
| @sonney2k | wiking, ok I maybe fixed 10 more R modular examples | 00:32 |
| @sonney2k | wiking, for some reason I couldn't get anything with labels to work | 00:33 |
| @sonney2k | maybe our typemap is b0rken | 00:33 |
| shogun-buildbot | build #89 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/89 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:33 |
| shogun-buildbot | build #144 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/144 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:37 |
| @sonney2k | wiking, yeah indeed b0rken | 00:38 |
| @sonney2k | x=BinaryLabels() | 00:38 |
| @sonney2k | x$set_labels(c(-1,+1)) | 00:38 |
| @sonney2k | x$get_num_labels() | 00:38 |
| @sonney2k | [1] 2 | 00:38 |
| @sonney2k | x$get_label(0) | 00:38 |
| @sonney2k | [1] 6.903836e-310 | 00:38 |
| @sonney2k | > x$get_label(1) | 00:38 |
| @sonney2k | [1] 2.643907e-316 | 00:38 |
| @sonney2k | found it | 00:42 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11368471 | 00:46 |
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| shogun-buildbot | build #1186 of rpm1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1186 | 00:48 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 7fc6a31 / src/interfaces/r_modular/swig_typemaps.i: https://github.com/shogun-toolbox/shogun/commit/7fc6a3135033ab750248da36164d81eb94ccd02a | 00:49 |
| shogun-notifier- | shogun: fix R modular typemaps - get_copy is not type aware so multiply with sizeof(type) | 00:49 |
| shogun-buildbot | build #90 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/90 blamelist: Soeren Sonnenburg <sonne@debian.org> | 00:56 |
| shogun-buildbot | build #1735 of bsd1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1735 | 00:58 |
| shogun-buildbot | build #145 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/145 blamelist: Soeren Sonnenburg <sonne@debian.org> | 01:00 |
| shogun-buildbot | build #1469 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1469 blamelist: Soeren Sonnenburg <sonne@debian.org> | 01:08 |
| shogun-buildbot | build #1816 of deb3 - modular_interfaces is complete: Failure [failed test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1816 blamelist: Soeren Sonnenburg <sonne@debian.org> | 01:09 |
| shogun-buildbot | build #1817 of deb3 - modular_interfaces is complete: Failure [failed test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1817 blamelist: Soeren Sonnenburg <sonne@debian.org> | 01:25 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11369418 | 01:38 |
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| shogun-buildbot | build #1470 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1470 blamelist: Soeren Sonnenburg <sonne@debian.org> | 01:45 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11369941 | 02:18 |
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| shogun-buildbot | build #524 of nightly_default is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/524 | 03:52 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 3e1e86d / examples/undocumented/r_modular/ (2 files): https://github.com/shogun-toolbox/shogun/commit/3e1e86dd10b92c5d5be9744d9d174528a1ffe2ba | 08:51 |
| shogun-notifier- | shogun: fix more examples | 08:51 |
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| gsomix | sonney2k, sonne|osx https://github.com/shogun-toolbox/shogun/pull/1595/ | 08:53 |
| gsomix | sorry for long delay, just have figured out how do it right | 08:54 |
| gsomix | sonney2k, sonne|osx btw there is one question in comments for PR. what strategy for splitting vectors/matrix? 1MB chunks? or more? or should be configurable | 08:55 |
| shogun-buildbot | build #91 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/91 blamelist: Soeren Sonnenburg <sonne@debian.org> | 09:05 |
| shogun-buildbot | build #146 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/146 blamelist: Soeren Sonnenburg <sonne@debian.org> | 09:07 |
| shogun-buildbot | build #1471 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1471 blamelist: Soeren Sonnenburg <sonne@debian.org> | 09:39 |
| shogun-buildbot | build #1818 of deb3 - modular_interfaces is complete: Failure [failed test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1818 blamelist: Soeren Sonnenburg <sonne@debian.org> | 09:41 |
| shogun-buildbot | build #1188 of rpm1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1188 blamelist: Soeren Sonnenburg <sonne@debian.org> | 09:41 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11376162 | 10:38 |
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| gsomix | wiking, hey | 10:58 |
| gsomix | how can I disable compiling of some source files if protobuf was not found? | 11:00 |
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| lisitsyn | gsomix: #ifndef | 11:34 |
| gsomix | lisitsyn, whole file? what if file is generated in compile time? | 11:37 |
| lisitsyn | gsomix: what is the file that's generated during compilation? | 11:37 |
| gsomix | shogun/io/protobuf/SGVector.pb.h for example. protoc compiler generates such files from .proto | 11:40 |
| gsomix | of course I can generate manually and add some changes by hands | 11:40 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 0497410 / src/ (3 files): https://github.com/shogun-toolbox/shogun/commit/04974102eced8664378d7f99d5a2c5b0252d6450 | 11:42 |
| shogun-notifier- | shogun: Add LMNN statistics | 11:42 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 90af76d / examples/undocumented/python_modular/graphical/metric_lmnn_objective.py: https://github.com/shogun-toolbox/shogun/commit/90af76da395b4ecc50ae5ac8e31d41420ffd0fdc | 11:42 |
| shogun-notifier- | shogun: Graphical example illustrating how to get and visualize the LMNN objective | 11:42 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * c5d3f06 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/c5d3f061b27edc20cb3592714a07c5c46e19c920 | 11:42 |
| shogun-notifier- | shogun: Merge pull request #1578 from iglesias/feature/lmnn_statistics | 11:42 |
| shogun-notifier- | shogun: | 11:42 |
| shogun-notifier- | shogun: Add LMNN statistics | 11:42 |
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| shogun-buildbot | build #147 of osx1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/147 | 12:01 |
| shogun-buildbot | build #92 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/92 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 12:03 |
| shogun-buildbot | build #148 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/148 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 12:09 |
| @HeikoS | sonney2k: I recruited a possible mentor for next year | 12:20 |
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| ark_ | hi.. | 12:24 |
| lisitsyn | ark_: hey | 12:25 |
| ark_ | in machine learning increasing io features can b helpful..if yes, can i contribute | 12:26 |
| lisitsyn | ark_: yeah sure you always can contribute | 12:26 |
| ark_ | super great,so where should i start at base.. | 12:27 |
| lisitsyn | ark_: well try to compile shogun from sources and may be change something | 12:28 |
| ark_ | sources r available frm which portal..it would be kind of u to reccmnd.. | 12:29 |
| lisitsyn | ark_: https://github.com/shogun-toolbox/shogun | 12:29 |
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| lambday | wiking: hi | 12:33 |
| shogun-buildbot | build #1472 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1472 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 12:34 |
| lambday | wiking: how do I build the java modular interface? Tried with cmake -DENABLE_TESTING=ON -DJavaModular=ON ..[from build] but it can't find jblas it seems | 12:34 |
| lambday | CMake Error at /usr/share/cmake/Modules/UseJava.cmake:536 (if): if given arguments: "jblas" "jblas-1.2.0" "STREQUAL" "" Unknown arguments specified | 12:34 |
| lambday | wiking: I have jblas.jar in /usr/share/java | 12:34 |
| shogun-buildbot | build #1189 of rpm1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1189 | 12:37 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11378891 | 12:44 |
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| shogun-buildbot | build #1819 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1819 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 12:50 |
| shogun-buildbot | build #1820 of deb3 - modular_interfaces is complete: Failure [failed test python_modular test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1820 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 13:11 |
| shogun-buildbot | build #1473 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1473 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 13:12 |
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| wiking | gsomix: still here? | 15:34 |
| gsomix | wiking, yep | 15:34 |
| wiking | gsomix: ok so what exactly do you need? | 15:35 |
| wiking | but most probably you hopefully set something like HAVE_PROTOBUF macro | 15:36 |
| gsomix | wiking, I realized that nothing for now. :) need ask sonney about some thin things | 15:37 |
| gsomix | wiking, yep, I added HAVE_PROTOBUF macro | 15:37 |
| wiking | gsomix: then you can check for HAVE_PROTOBUF in the code (#ifdef HAVE_PROTOBUF)... | 15:39 |
| wiking | gsomix: have you seen the CSVFile bug on osx? | 15:40 |
| gsomix | wiking, yep, I'll fix little later. | 15:40 |
| wiking | thnx | 15:43 |
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| shogun-notifier- | shogun: Thoralf Klein :develop * 11348be / tests/unit/io/StreamingAsciiFile_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/11348bed56e97138319af03c66766e2683b4f5e5 | 20:57 |
| shogun-notifier- | shogun: Added (segfaulting) unit test for defective class StreamingAsciiFile. | 20:57 |
| shogun-notifier- | shogun: Viktor Gal :develop * 08b195c / tests/unit/io/StreamingAsciiFile_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/08b195c0017abb0f32e3d516a325dbc35a529756 | 20:57 |
| shogun-notifier- | shogun: Merge pull request #1597 from tklein23/streaming_ascii_file_test | 20:57 |
| shogun-notifier- | shogun: | 20:57 |
| shogun-notifier- | shogun: Added (segfaulting) unit test for defective class StreamingAsciiFile. | 20:57 |
| shogun-buildbot | build #2155 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2155 blamelist: Thoralf Klein <thoralf.klein@zib.de> | 21:11 |
| shogun-buildbot | build #93 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/93 blamelist: Viktor Gal <vigsterkr@gmail.com> | 21:13 |
| shogun-buildbot | build #149 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/149 blamelist: Viktor Gal <vigsterkr@gmail.com> | 21:13 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 22c2fb8 / examples/undocumented/r_modular/ (22 files): https://github.com/shogun-toolbox/shogun/commit/22c2fb8233a86d9fb206410ab00eb5c575356481 | 21:44 |
| shogun-notifier- | shogun: a platitude of fixes for R modular examples | 21:44 |
| wiking | sonney2k: i'm debugging now R scrips | 21:45 |
| wiking | i miiiight have a fix for these shit | 21:45 |
| @sonney2k | wiking, I fixed them close to all I think | 21:45 |
| @sonney2k | there are various issues though | 21:45 |
| wiking | sonney2k: i meant to be able to call feats_train <- RealFeatures(fm_train_real) | 21:46 |
| shogun-buildbot | build #1474 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1474 blamelist: Viktor Gal <vigsterkr@gmail.com> | 21:46 |
| @sonney2k | wiking, cool | 21:46 |
| @sonney2k | wiking, there is also an issue with e.g. the linear kernel | 21:46 |
| @sonney2k | wiking, it has a init() method but it is mixed up with init_optimization() | 21:47 |
| @sonney2k | by the dispatcher I mean | 21:47 |
| shogun-buildbot | build #1821 of deb3 - modular_interfaces is complete: Failure [failed test python_modular test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1821 blamelist: Viktor Gal <vigsterkr@gmail.com> | 21:50 |
| shogun-buildbot | build #94 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/94 blamelist: Soeren Sonnenburg <sonne@debian.org> | 21:54 |
| shogun-buildbot | build #150 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/150 blamelist: Soeren Sonnenburg <sonne@debian.org> | 21:54 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11389447 | 22:00 |
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| shogun-buildbot | build #1475 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1475 blamelist: Soeren Sonnenburg <sonne@debian.org> | 22:21 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 91dce89 / examples/undocumented/r_modular/mkl_multiclass_modular.R: https://github.com/shogun-toolbox/shogun/commit/91dce896a57d3bbade778cb12eea01bd259bb84d | 22:28 |
| shogun-notifier- | shogun: fix mkl R example | 22:28 |
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| gsomix | hi | 22:30 |
| shogun-buildbot | build #95 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/95 blamelist: Soeren Sonnenburg <sonne@debian.org> | 22:39 |
| shogun-buildbot | build #151 of osx1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/151 blamelist: Soeren Sonnenburg <sonne@debian.org> | 22:41 |
| shogun-buildbot | build #1822 of deb3 - modular_interfaces is complete: Failure [failed test python_modular test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1822 blamelist: Soeren Sonnenburg <sonne@debian.org> | 22:45 |
| shogun-buildbot | build #79 of precise - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/79 blamelist: Soeren Sonnenburg <sonne@debian.org> | 22:48 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11390878 | 22:52 |
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| shogun-buildbot | build #1476 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1476 blamelist: Soeren Sonnenburg <sonne@debian.org> | 23:08 |
| @iglesiasg | gsomix, hi! | 23:25 |
| gsomix | iglesiasg, hey | 23:25 |
| @iglesiasg | gsomix, how are you doing? | 23:25 |
| gsomix | iglesiasg, it seems fine, but I'm not sure. :) what about you? | 23:26 |
| @iglesiasg | gsomix, I am good :) Ready to make some progress hehe | 23:26 |
| @iglesiasg | gsomix, I just run the unit tests in my machine and got this: | 23:27 |
| @iglesiasg | [ FAILED ] SGObject.clone_equals_AsciiFile | 23:27 |
| @iglesiasg | [ FAILED ] SerializationAscii.AsciiFile | 23:27 |
| @iglesiasg | [ FAILED ] SerializationHDF5.AsciiFile | 23:27 |
| @iglesiasg | [ FAILED ] SerializationXML.AsciiFile | 23:27 |
| @iglesiasg | gsomix, do you happen to have any idea if there was a problem with these tests? | 23:27 |
| @iglesiasg | I am checking travis atm | 23:27 |
| @iglesiasg | but the webpage is taking ages to looooad :D | 23:27 |
| gsomix | iglesiasg, hm | 23:29 |
| gsomix | failed because of AsciiFile doesn't exist in this universe anymore | 23:30 |
| gsomix | need to check | 23:30 |
| @iglesiasg | gsomix, hehe ok | 23:33 |
| @iglesiasg | gsomix, maybe I should make clean and recompile from zero | 23:33 |
| shogun-buildbot | build #1823 of deb3 - modular_interfaces is complete: Failure [failed test python_modular test ruby_modular test r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1823 blamelist: Soeren Sonnenburg <sonne@debian.org> | 23:37 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11391991 | 23:41 |
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| @iglesiasg | gsomix, btw | 23:42 |
| @iglesiasg | is there any trick to use the CSVFile class or similar to read from a gz compressed file? | 23:42 |
| @iglesiasg | gsomix, I have a CSV file gz compressed from which I would like to load a feature matrix | 23:43 |
| wiking | iglesiasg: zcat | 23:47 |
| @iglesiasg | wiking, thanks! | 23:48 |
| @iglesiasg | wiking, I need to use from a example in the python modular interface | 23:48 |
| wiking | iglesiasg: use zlib in python | 23:51 |
| @iglesiasg | wiking, what about gzip.GzipFile() | 23:52 |
| @iglesiasg | that returns me a string if read() is called after that | 23:52 |
| @iglesiasg | then I need to parse that string to a numpy.array to get the feature matrix | 23:52 |
| @iglesiasg | just wondering if there was something easy as we have RealFeatures(CSVFile('fname')) to get features from a CSVFile gz-compressed | 23:53 |
| @iglesiasg | sonney2k told me to compress the file, so I assumed it should be straightforward to load features from the gz file too | 23:54 |
| wiking | iglesiasg: afaik CSVFile should support FILE* | 23:54 |
| gsomix | iglesiasg, nope. as I know we don't support gzipped files in CSVFile. | 23:54 |
| wiking | and it does | 23:54 |
| wiking | imho | 23:54 |
| wiking | so if it does | 23:55 |
| wiking | then basically if u can supply an object that has .read() function for CSVFile | 23:55 |
| wiking | then it would be ok | 23:55 |
| wiking | iglesiasg: cant u just do | 23:56 |
| @iglesiasg | wiking, I tried with CSVFile(gzip.GzipFile('gzipped file')) | 23:56 |
| wiking | RealFeatures(CSVFile(gzip.GzipFile('fulename'))) ? | 23:56 |
| wiking | and? | 23:56 |
| @iglesiasg | it broke | 23:56 |
| @iglesiasg | let me try again, in case I screwed something | 23:56 |
| wiking | what did it say? | 23:56 |
| wiking | CSVFile(gzip.open('file.txt.gz', 'rb')) | 23:57 |
| wiking | ? | 23:57 |
| @iglesiasg | wiking, the constructor of CSVFile does not work | 23:58 |
| @iglesiasg | ah wait | 23:58 |
| @iglesiasg | I didn't do it with gzip.open | 23:58 |
| @iglesiasg | let me try with that | 23:58 |
| wiking | its the same i think | 23:58 |
| wiking | what do u mean does not work? | 23:58 |
| @iglesiasg | wiking, same same | 23:59 |
| @iglesiasg | wiking, ** NotImplementedError: Wrong number or type of arguments for overloaded function 'new_CSVFile'. | 23:59 |
| wiking | mmm | 23:59 |
| --- Log closed Mon Sep 16 00:00:01 2013 | ||
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