| --- Log opened Tue Sep 17 00:00:02 2013 | ||
| -!- iglesiasg [~iglesias@s83-179-44-135.cust.tele2.se] has quit [Ping timeout: 245 seconds] | 00:02 | |
| van51 | sonney2k: I made a PR for the RKS.. | 00:22 |
|---|---|---|
| van51 | sonney2k: I don't think it's trivial to allow subclasses to implement directly their functions in the dot methods if they want | 00:25 |
| van51 | sonney2k: through a supplementary method I mean | 00:25 |
| van51 | sonney2k: but I guess they can just override the methods as whole :) | 00:26 |
| van51 | sonney2k: if you have another suggestion let me know | 00:26 |
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| -!- zxtx [~zv@129-79-241-50.dhcp-bl.indiana.edu] has quit [Ping timeout: 245 seconds] | 00:50 | |
| -!- zxtx [~zv@ip-64-134-197-230.public.wayport.net] has joined #shogun | 02:35 | |
| shogun-buildbot | build #526 of nightly_default is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/526 | 03:19 |
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| -!- lisitsyn [~lisitsyn@fb2-lo1.global63.net] has joined #shogun | 08:28 | |
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| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 082873b / data: https://github.com/shogun-toolbox/shogun/commit/082873b0e6b6a5581c90bb4717c0292db4fe3b51 | 08:29 |
| shogun-notifier- | shogun: require new data version for hdf5 test | 08:29 |
| sonne|osx | wiking: in case you are awake / have time - looks like the buildbots filled up the harddisk | 08:31 |
| sonne|osx | (2TB ...) | 08:31 |
| sonne|osx | so please erase a bit | 08:31 |
| shogun-buildbot | build #2166 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2166 blamelist: Soeren Sonnenburg <sonne@debian.org> | 08:32 |
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| wiking | sonney2k: ? | 09:08 |
| wiking | how the fuck is this possible | 09:09 |
| wiking | no not really | 09:09 |
| wiking | /dev/sda2 1.8T 110G 1.6T 7% /home | 09:09 |
| -!- lisitsyn [~lisitsyn@fb2-lo1.global63.net] has quit [Quit: Leaving.] | 09:23 | |
| -!- besser82 [~besser82@fedora/besser82] has joined #shogun | 09:23 | |
| besser82 | Mornin' Folks! | 09:24 |
| besser82 | wiking: ARPREC is avail now in Fedora ;) | 09:25 |
| besser82 | wiking: yum install arprec-devel | 09:25 |
| wiking | hey :) | 09:26 |
| besser82 | wiking: and the new update of rubygem-narray should fixup the issues with ruby_modular ;) | 09:33 |
| besser82 | wiking: but there's an issue with R_modular: make install fails, if R_modular is enabled && build :( | 09:34 |
| wiking | what is it | 09:35 |
| wiking | i'm just about to send a patch for your prvious problem | 09:35 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11451546 | 09:36 |
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| shogun-notifier- | shogun: Viktor Gal :develop * 0d0f3ee / tests/unit/base/clone_unittest.cc.py: https://github.com/shogun-toolbox/shogun/commit/0d0f3eecfec68c0c09e8185f370d9092c4b4f253 | 09:40 |
| shogun-notifier- | shogun: Fix dummy test case generation for automated unittest if jinja2 is not | 09:40 |
| shogun-notifier- | shogun: present | 09:40 |
| besser82 | wiking: just second ;) need to rebuild with it enabled ;) | 09:40 |
| shogun-buildbot | build #2167 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2167 blamelist: Viktor Gal <viktor.gal@maeth.com> | 09:42 |
| wiking | besser82: here | 09:42 |
| besser82 | wiking: currently building... will paste output of failure ;) | 09:45 |
| wiking | ok | 09:52 |
| sonne|work | wiking: check the buildbot's master | 09:57 |
| sonne|work | man why are we suddenly having http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2167 | 09:58 |
| wiking | sonne|work: i guess one commit did this | 09:59 |
| wiking | sonne|work: /dev/sda2 914G 37G 831G 5% /home | 09:59 |
| sonne|work | weird then | 09:59 |
| besser82 | wiking: -- Installing: /home/besser82/rpmbuild/BUILDROOT/shogun-3.0.0-0.1.git20130915.f56e63e.fc20.x86_64/usr/lib64/R/library/shogun/R/modshogun.RData | 10:02 |
| besser82 | CMake Error at src/interfaces/r_modular/cmake_install.cmake:60 (FILE): | 10:02 |
| besser82 | file problem creating directory: /usr/lib64/R/library/shogun/Meta | 10:02 |
| besser82 | Call Stack (most recent call first): | 10:02 |
| besser82 | cmake_install.cmake:41 (INCLUDE) | 10:02 |
| besser82 | wiking: ^^^ | 10:02 |
| wiking | do u have /usr/lib64/R/library/shogun ? | 10:03 |
| besser82 | wiking: so you say the dir needs to be present BEFORE install? | 10:04 |
| wiking | is it present now? | 10:04 |
| besser82 | wiking: yes | 10:04 |
| besser82 | wiking: %{buildroot}/usr/lib64/R/library/shogun is present | 10:05 |
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| wiking | ok | 10:05 |
| wiking | then why cannot it create a Meta dir in it? | 10:05 |
| wiking | :) | 10:05 |
| besser82 | wiking: I dunno?!? | 10:05 |
| besser82 | wiking: enough free space on disk > 600GBytes | 10:05 |
| wiking | mmm interesting | 10:05 |
| besser82 | wiking: btw. Perl_modular doesn't even finsh configure stage... | 10:07 |
| wiking | besser82: because that's not even enabled... | 10:07 |
| wiking | that's an untested modular interface | 10:07 |
| wiking | so dont even try to put into a package | 10:07 |
| besser82 | wiking: kk :) | 10:07 |
| wiking | sonne|work: interestingly enough the same repo compiles on my machine just fine.. | 10:08 |
| shogun-notifier- | shogun-data: lambday :master * 48d5dec / logdet/west0479.mtx.gz,logdet/west0479.txt.gz,logdet/west0479.tar.gz: https://github.com/shogun-toolbox/shogun-data/commit/48d5dec2cdfde862cf22b64122f6fcf541691cba | 10:43 |
| shogun-notifier- | shogun-data: Added matrix-data in mtx (original) and ascii (converted) (log-det) | 10:43 |
| shogun-notifier- | shogun-data: Heiko Strathmann :master * 0bf9160 / logdet/west0479.mtx.gz,logdet/west0479.txt.gz,logdet/west0479.tar.gz: https://github.com/shogun-toolbox/shogun-data/commit/0bf91608b044630a85f2f637086624a2c04d6052 | 10:43 |
| shogun-notifier- | shogun-data: Merge pull request #20 from lambday/master | 10:43 |
| shogun-notifier- | shogun-data: | 10:43 |
| shogun-notifier- | shogun-data: Added matrix-data in mtx (original) and ascii (converted) (log-det) | 10:43 |
| -!- lambday [67157d37@gateway/web/freenode/ip.103.21.125.55] has joined #shogun | 10:46 | |
| wiking | lisitsyn: about the whole thing apply/train | 10:52 |
| wiking | lisitsyn: what if we start mimicing gstreamer setup? | 10:52 |
| lisitsyn | wiking: I don't know about gstreamer | 10:52 |
| wiking | lisitsyn: well it's a bunch of .so -s | 10:52 |
| wiking | and then you just hook together containers | 10:52 |
| wiking | into a pipeline | 10:53 |
| lisitsyn | yeah it seems like it is the way | 10:53 |
| wiking | hence when u run the pipeline | 10:53 |
| wiking | the only thing that is loaded into the memory is the required .sos | 10:53 |
| wiking | i mean dylibs | 10:53 |
| lisitsyn | yeah or dlls | 10:54 |
| lisitsyn | whatever :) | 10:54 |
| wiking | yeah ... | 10:54 |
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| wiking | this way we save up as well a lot of memory :P | 10:54 |
| lisitsyn | I find it quite bad that we have like >200mb so/dylib/dll | 10:54 |
| wiking | yeah | 10:54 |
| wiking | i mean gstreamer would be the same | 10:54 |
| wiking | with all those video codecs it suppors | 10:54 |
| wiking | *supports | 10:54 |
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| wiking | hehe not really true but whatever: | 10:55 |
| wiking | 21M/opt/local/lib/gstreamer-1.0/ | 10:55 |
| wiking | it would be bigger than it is now | 10:55 |
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| thoralf | Hey. | 11:03 |
| besser82 | wiking: Why does `make install` place libshogun.so* and other things in /usr/lib although they should go to /usr/lib64 on x86_64? | 11:04 |
| besser82 | wiking: python_modular and most of the other plugins go to right location.... | 11:04 |
| sonne|work | besser82: is there a default? | 11:05 |
| sonne|work | wiking: well gstreamer is stripped too | 11:06 |
| besser82 | sonne|work: sure. cmake get's all needed defines passed during %build: | 11:06 |
| besser82 | /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_BUILD_TYPE=Release -DBUNDLE_EIGEN=OFF -DBUNDLE_NL | 11:06 |
| besser82 | OPT=OFF -DBUNDLE_JSON=OFF -DENABLE_TESTING=ON -DUSE_SVMLIGHT=OFF -DCmdLineStatic=ON -DLuaModular=ON -DOctaveModular=ON -DPythonModular=ON -DRubyModular=ON .. | 11:06 |
| besser82 | sonne|work, wiking: ^^^^ | 11:06 |
| sonne|work | besser82: ahh ok then it is a bug for wiking :P | 11:07 |
| wiking | besser82: lib_suffix that is? | 11:07 |
| besser82 | wiking: or "LIB_INSTALL_DIR" | 11:15 |
| besser82 | wiking: take the one which is easier to implement for you ;) | 11:15 |
| besser82 | wiking: shall I open an issue on gh for tracking? | 11:15 |
| wiking | yeah u can | 11:18 |
| wiking | besser82: but LIB_INSTALL_DIR is not always set or? | 11:18 |
| besser82 | wiking: LIB_SUFFIX either ;) | 11:19 |
| wiking | ok then | 11:19 |
| besser82 | wiking: i'd suggest to wrap it in some conditional... ;) | 11:19 |
| besser82 | wiking: if NOT defined LIB_INSTALL_DIR.... | 11:20 |
| besser82 | wiking: or such... | 11:20 |
| -!- HeikoS [~heiko@nat-179-139.internal.eduroam.ucl.ac.uk] has joined #shogun | 11:22 | |
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| besser82 | HeikoS: https://github.com/shogun-toolbox/shogun/pull/1608 && https://github.com/shogun-toolbox/shogun/issues/1604, did ya notice? ;) | 11:24 |
| @HeikoS | besser82: just saw | 11:27 |
| besser82 | HeikoS: that should do anything needed like we did yesterday ;) | 11:28 |
| @HeikoS | cool, how to activate it? | 11:28 |
| @HeikoS | -DUSE_ORIGINAL_LAPACK=On ? | 11:28 |
| @HeikoS | and probably -DLAPACL_LIBRARIES=/for/bar ? | 11:28 |
| besser82 | HeikoS: `cmake -DUSE_ORIGINAL_LAPACK=ON` is enough ;) | 11:29 |
| besser82 | HeikoS: will automatically PREPEND %{_libdir}/liblapack.so.[0-9] | 11:30 |
| besser82 | HeikoS: ATLAS stuff will be placed after these, then | 11:30 |
| besser82 | HeikoS: so the linker should be prefer LAPACK.so, then ;) | 11:31 |
| besser82 | HeikoS: I might be possible we would need libclapack.so as well, but that should be handled by FindATLAS.cmake | 11:32 |
| besser82 | HeikoS: which I can implement in the PR, too, if needed... | 11:32 |
| @HeikoS | okay cool | 11:38 |
| @HeikoS | lets wait for travis and then merge :) | 11:38 |
| @HeikoS | lambday: hi! | 11:40 |
| lambday | HeikoS: hi | 11:40 |
| lambday | HeikoS: working in notebook | 11:40 |
| @HeikoS | lambday: nice! | 11:40 |
| @HeikoS | already got something to share? :) | 11:40 |
| @HeikoS | being curious | 11:40 |
| lambday | HeikoS: took me an hour to install things properly behind proxy | 11:40 |
| @HeikoS | argh | 11:40 |
| @HeikoS | annoying | 11:40 |
| lambday | HeikoS: just added up to linear solvers | 11:40 |
| lambday | HeikoS: but how to port images when viewing in nbviewer?? | 11:41 |
| lambday | HeikoS: yeah :( pip install doesn't work even with --proxy :( | 11:41 |
| @HeikoS | just evaluate all cells, save the notebook, upload it to gist, and put the number into nbviewer | 11:41 |
| @HeikoS | lambday: ah stupid, well, you dont need cholmod I guess | 11:41 |
| @HeikoS | since we have a linear solve using sparse LLT in shogun now | 11:41 |
| @HeikoS | (though its a bit slow) | 11:42 |
| lambday | HeikoS: yeah we don't need cholmod | 11:42 |
| lambday | HeikoS: but the images... I saved these images in a dir, from which I use markdown to show them | 11:43 |
| @HeikoS | lambday: what? | 11:44 |
| @HeikoS | lambday: which images? | 11:44 |
| lambday | HeikoS: sparsity structure, eigenspectrum | 11:44 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11453564 | 11:45 |
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| lambday | the code is there but the image don't embed within it but pops out :-/ | 11:45 |
| @HeikoS | lambday: ah | 11:46 |
| @HeikoS | ipython notebook --pylab inline | 11:46 |
| lambday | err.. okay :D thanks :D | 11:47 |
| @HeikoS | lambday: or like in here | 11:47 |
| @HeikoS | http://nbviewer.ipython.org/6579472 | 11:47 |
| @HeikoS | %pylab inline | 11:47 |
| @HeikoS | in fact, that is better | 11:47 |
| lambday | HeikoS: awesome | 11:48 |
| lambday | checking out | 11:48 |
| besser82 | wiking: there's the issue: https://github.com/shogun-toolbox/shogun/issues/1609 | 11:50 |
| besser82 | wiking: as far as I can tell: libshogun.so* and lua_modular are affected | 11:51 |
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| @iglesiasg | HeikoS, hey! I am on the integration test from right now | 12:16 |
| @HeikoS | iglesiasg: cool! :) | 12:16 |
| @iglesiasg | HeikoS, I really think though that it happens because I changed the structure of LMNN (added a new member) | 12:17 |
| @HeikoS | iglesiasg: yep thats the reason | 12:17 |
| @iglesiasg | HeikoS, would that explain it? | 12:17 |
| @HeikoS | changing classes breaks integration tests | 12:17 |
| @HeikoS | (see my issue :) ) | 12:17 |
| @iglesiasg | HeikoS, mm ok. Does it have to be fixed manually in any case? | 12:17 |
| @iglesiasg | yep, I remember it | 12:17 |
| @HeikoS | iglesiasg: yes you have to update the file | 12:17 |
| @iglesiasg | HeikoS, all right, let me have a look how this works | 12:17 |
| @iglesiasg | I guess it should be enough removing the file | 12:18 |
| @HeikoS | iglesiasg: nono | 12:19 |
| @HeikoS | in the integration test folder in python modular | 12:20 |
| @HeikoS | there are two scripts: tester.py and generator.py | 12:20 |
| @HeikoS | tester.py <your-test-filename> runs the test | 12:20 |
| @HeikoS | which the travis does | 12:20 |
| @HeikoS | and generator.py creates a new file for it | 12:20 |
| @HeikoS | overwriting the old | 12:20 |
| @HeikoS | if you did this, you have to do two commits: | 12:20 |
| @HeikoS | first commit the modified files (into the different repository shogun-data) | 12:21 |
| @HeikoS | second: commit the "data" version in the development branch | 12:21 |
| @iglesiasg | HeikoS, thanks for the explanation! | 12:23 |
| @HeikoS | iglesiasg: now you see why I find this annoying btw | 12:23 |
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| @iglesiasg | HeikoS, question | 12:34 |
| @iglesiasg | HeikoS, I did the PR in shogun-data with the new file created by generator.py | 12:35 |
| @HeikoS | yep | 12:35 |
| @iglesiasg | HeikoS, and I get the message in shogun repo that the data dir has received new commits. Should I commit this version right away or wait until it is merged? | 12:36 |
| @iglesiasg | I have no idea really how this versions of submodule work actually | 12:36 |
| @HeikoS | iglesiasg: as soon as you changed/comitted them locally, you can update the data version | 12:37 |
| @iglesiasg | HeikoS, all right, I will make the PR right now then. If you have time, have a look | 12:38 |
| @HeikoS | iglesiasg: OK! | 12:39 |
| @HeikoS | iglesiasg: you can directly merge the data commit | 12:40 |
| @HeikoS | since the main repo will only use it when you change the data version | 12:40 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 2e73702 / data: https://github.com/shogun-toolbox/shogun/commit/2e737021faba851a86ec6d2ce0fd719796682c44 | 12:40 |
| shogun-notifier- | shogun: Update data version | 12:40 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 2b98ecb / data: https://github.com/shogun-toolbox/shogun/commit/2b98ecbf81ccc4b133ec996c2dcfd927365264eb | 12:40 |
| shogun-notifier- | shogun: Merge pull request #1610 from iglesias/develop | 12:40 |
| shogun-notifier- | shogun: | 12:41 |
| shogun-notifier- | shogun: Update data version | 12:41 |
| shogun-buildbot | build #2169 of deb1 - libshogun is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2169 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 12:42 |
| shogun-buildbot | build #2168 of deb1 - libshogun is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2168 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 12:42 |
| @iglesiasg | HeikoS, I think we should merge in shogun-data before merging in shogun for data version update :) | 12:43 |
| shogun-notifier- | shogun-data: Fernando Iglesias :master * f752c3b / testsuite/tests/metric_lmnn_modular0.txt: https://github.com/shogun-toolbox/shogun-data/commit/f752c3beae53e6eff6e22d7fa48b05086b29d04b | 12:43 |
| shogun-notifier- | shogun-data: New LMNN testsuite file after new member was added | 12:43 |
| shogun-notifier- | shogun-data: Fernando Iglesias :master * 1c7d13d / testsuite/tests/metric_lmnn_modular0.txt: https://github.com/shogun-toolbox/shogun-data/commit/1c7d13d205fba4cef831d959b625e5121cb449b7 | 12:43 |
| shogun-notifier- | shogun-data: Merge pull request #22 from iglesias/lmnn | 12:43 |
| shogun-notifier- | shogun-data: | 12:43 |
| shogun-notifier- | shogun-data: New LMNN testsuite file after new member was added | 12:43 |
| @iglesiasg | shogun-buildbot, force build "deb1 - libshogun" | 12:45 |
| shogun-buildbot | build forced [ETA 4m14s] | 12:45 |
| shogun-buildbot | I'll give a shout when the build finishes | 12:45 |
| shogun-buildbot | build #2170 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2170 | 12:45 |
| @iglesiasg | wtf | 12:45 |
| @iglesiasg | shogun-buildbot, force build "deb1 - libshogun" | 12:46 |
| shogun-buildbot | build forced [ETA 4m14s] | 12:46 |
| shogun-buildbot | I'll give a shout when the build finishes | 12:46 |
| shogun-buildbot | build #2171 of deb1 - libshogun is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2171 | 12:46 |
| @HeikoS | iglesiasg: next thing is to push the data version | 12:49 |
| @HeikoS | this fill fix the integration test then | 12:49 |
| @iglesiasg | HeikoS, I have pushed both to shogun and shogun-data | 12:50 |
| @iglesiasg | HeikoS, something is wrong in the configuration though | 12:50 |
| @HeikoS | ah sorry did not see | 12:50 |
| @HeikoS | iglesiasg: what happens? | 12:50 |
| @iglesiasg | http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2171/steps/configure/logs/stdio | 12:50 |
| @HeikoS | ah yeah buildbots do weird thing currently, we are mostly on travis | 12:50 |
| @iglesiasg | HeikoS, ok | 12:50 |
| @HeikoS | iglesiasg: I think it would be very nice to have developer howtos | 12:51 |
| @HeikoS | with instructions for these kind of things | 12:51 |
| @iglesiasg | HeikoS, yes. The integration test part is probably explained in the integration/README though | 12:52 |
| @iglesiasg | the tester.py and generator.py I mean | 12:52 |
| @iglesiasg | so maybe we could just add the git thing there as well | 12:52 |
| @HeikoS | yeah who reads that? | 12:52 |
| @iglesiasg | haha | 12:53 |
| @HeikoS | iglesiasg: how long are you around in shogun now? but never stumbled over this | 12:53 |
| @HeikoS | on the webpage or github, this would have been different | 12:53 |
| @iglesiasg | see your point | 12:54 |
| @HeikoS | But I always complain, should rather write those things | 12:54 |
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| @iglesiasg | HeikoS, so have you seen people using Julia already? | 12:59 |
| @HeikoS | iglesiasg: yes, one sitting in my office | 12:59 |
| @iglesiasg | HeikoS, cool | 12:59 |
| @HeikoS | iglesiasg: tried it myself, pretty nice | 13:01 |
| @HeikoS | I might use it in a few years :) | 13:01 |
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| @iglesiasg | HeikoS, all right so lmnn integration test fixed | 13:11 |
| @iglesiasg | a couple in svm to go | 13:12 |
| @iglesiasg | https://travis-ci.org/shogun-toolbox/shogun/jobs/11459254 | 13:12 |
| @HeikoS | iglesiasg: cool! | 13:12 |
| @HeikoS | iglesiasg: always be careful when overwriting the files | 13:12 |
| @HeikoS | its good to check whats wrong before | 13:12 |
| @HeikoS | if just a member was added its safe to change | 13:12 |
| @iglesiasg | HeikoS, aham, I understand | 13:12 |
| @HeikoS | but sometimes other things are wrong (so the test actually detected an error) - though thats rare in my experience | 13:12 |
| besser82 | HeikoS, sonne|work, wiking: Hey, guys! Looks im heading to beta-stage with my rpms for el5, el6 and FC18+ :D | 13:27 |
| @HeikoS | iglesiasg: http://nbviewer.ipython.org/6593067 | 13:27 |
| @HeikoS | besser82: awesome! :9 | 13:27 |
| @HeikoS | :) | 13:27 |
| @iglesiasg | HeikoS, is cholesky from numpy? | 13:28 |
| besser82 | HeikoS, sonne|work, wiking: For el5 I'll need some stuff backported, like CMake 2.8.X, by some of my fedora-buddies. But that shouldn't be a real problem ;) | 13:28 |
| @iglesiasg | HeikoS, ah ok it is the PCA whitening thing | 13:29 |
| @iglesiasg | HeikoS, thank you! | 13:29 |
| @HeikoS | besser82: nice! | 13:29 |
| @HeikoS | iglesiasg: yeah | 13:29 |
| @HeikoS | iglesiasg: sorry I imported pylab stuff | 13:29 |
| @iglesiasg | no problem | 13:29 |
| @iglesiasg | thanks | 13:29 |
| @HeikoS | iglesiasg: compute the covariance of the data before and after, then youll see the effect, btw here is the math: http://en.wikipedia.org/wiki/Whitening_transformation | 13:30 |
| shogun-notifier- | shogun: Bj?rn Esser :develop * 83e5bb9 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/83e5bb9f6c8c5525eb8707db031e3cfcac1d7fcc | 13:31 |
| shogun-notifier- | shogun: add option "USE_ORIGINAL_LAPACK" to prefer found ${LAPACK_LIBRARIES} | 13:31 |
| shogun-notifier- | shogun: over the ones found in ${ATLAS_LIBRARIES} during linker-stage, because | 13:31 |
| shogun-notifier- | shogun: some versions of liblapack.so provided by ATLAS are missing some needed | 13:31 |
| shogun-notifier- | shogun: symbols from the original LAPACK library -- this is case on el5, e.g. | 13:31 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * e3e225d / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/e3e225d6ebece678ef3cf25be4e6885f8ee761fe | 13:31 |
| shogun-notifier- | shogun: Merge pull request #1608 from besser82/fix_lapack_cmake | 13:31 |
| shogun-notifier- | shogun: | 13:31 |
| shogun-notifier- | shogun: add option "USE_ORIGINAL_LAPACK" | 13:31 |
| besser82 | HeikoS: Thanks ;) | 13:33 |
| shogun-buildbot | build #2173 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2173 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 13:37 |
| @HeikoS | besser82: trying it now | 13:39 |
| besser82 | HeikoS: kk, go on ;) | 13:39 |
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| @HeikoS | besser82: did not work | 13:46 |
| @HeikoS | besser82: but getting back in an hour, going for lunch now :) | 13:47 |
| besser82 | HeikoS: kk, can you paste the error-msg, plz? | 13:47 |
| @iglesiasg | HeikoS, enjoy your meal ;) | 13:47 |
| shogun-buildbot | build #2172 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2172 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 13:48 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11459251 | 14:09 |
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| wiking | shogun-buildbot: force build --branch=develop 'deb1 - libshogun' | 14:19 |
| shogun-buildbot | build forced [ETA 4m14s] | 14:19 |
| shogun-buildbot | I'll give a shout when the build finishes | 14:19 |
| shogun-buildbot | build #2174 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2174 | 14:20 |
| @HeikoS | besser82: around? | 14:29 |
| besser82 | HeikoS. sure! | 14:29 |
| @HeikoS | ok then let me paste the errors | 14:29 |
| @HeikoS | (same as before) and the commands | 14:29 |
| besser82 | HeikoS: same as before? Like in the issue-ticket? | 14:30 |
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| yoo__ | hi! how to solve "g++ version is too old" ? | 14:36 |
| -!- yoo__ [2eda6d58@gateway/web/freenode/ip.46.218.109.88] has quit [Client Quit] | 14:37 | |
| @HeikoS | yoo__ use a more recent one :) you can specify another gcc/g++ bin, see readme.cmake | 14:40 |
| thoralf | HeikoS: yoo__ wasn't patient enough for your answer ;) | 14:42 |
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| -!- yo is now known as Guest55703 | 14:44 | |
| Guest55703 | re all! how to solve "g++ version is to old ?" | 14:44 |
| @HeikoS | Guest55703: hi see above | 14:45 |
| Guest55703 | don't have anythg above :) | 14:46 |
| sonne|work | 02:40:40 PM) HeikoS: yoo__ use a more recent one :) you can specify another gcc/g++ bin, see readme.cmake | 14:46 |
| sonne|work | ^ Guest55703 | 14:46 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11460601 | 14:46 |
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| sonne|work | now you have :P | 14:46 |
| Guest55703 | thanks! | 14:47 |
| Guest55703 | weird, tried g++ 4.6 or clang++ 3.0 and cmake continue to raise "g++ is too old" | 14:51 |
| @HeikoS | Guest55703: really? | 14:52 |
| @HeikoS | that should be a bug then | 14:52 |
| Guest55703 | cmake version is 4.8.3 | 14:52 |
| @HeikoS | since we only need 4.4 or so | 14:52 |
| @HeikoS | cmake 4? | 14:52 |
| Guest55703 | and each time I have remove cmake cache | 14:52 |
| @HeikoS | 2.8.2 you mean? | 14:52 |
| wiking | Guest55703: what os? | 14:52 |
| Guest55703 | ubuntu | 14:52 |
| wiking | Guest55703: ok try running cmake with -DENABLE_CCACHE=OFF | 14:53 |
| Guest55703 | sss | 14:53 |
| Guest55703 | nice it works | 14:53 |
| @HeikoS | wiking: I think I found a bug related to automated unit tests | 14:53 |
| @HeikoS | if jinja is not around there are these dummy tests | 14:54 |
| wiking | HeikoS: that's already fixed | 14:54 |
| @HeikoS | and my compiler complains about the "." in the name | 14:54 |
| @HeikoS | ".cc_dummy" | 14:54 |
| wiking | HeikoS: 0d0f3eecfec68c0c09e8185f370d9092c4b4f253 | 14:54 |
| @HeikoS | when was that fixed? just rebased | 14:54 |
| Guest55703 | -DENABLE_CCACHE=OFF resolves the cmake error | 14:54 |
| @HeikoS | ok | 14:54 |
| wiking | HeikoS: wtf | 14:54 |
| wiking | aaah i know | 14:54 |
| Guest55703 | I dont understand why anyway | 14:54 |
| wiking | Guest55703: ubuntu feature | 14:54 |
| wiking | HeikoS: ok i'll push the fix soon | 14:55 |
| @HeikoS | wiking: okay thanks | 14:55 |
| Guest55703 | ok thanks again | 14:55 |
| wiking | nw | 14:55 |
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| @HeikoS | wiking: whats with this new coverage flag? | 15:06 |
| wiking | HeikoS: not really working yet | 15:06 |
| @HeikoS | wiking: ok, another question. Are debug symbols included in "Release". Or anything else that could make code (eigen3) slow? | 15:07 |
| @HeikoS | since I am confused about its slow speed compared to cholmod | 15:08 |
| @HeikoS | (which I call from python) | 15:08 |
| -!- van51 [~van51@athedsl-409794.home.otenet.gr] has quit [Quit: Leaving.] | 15:16 | |
| wiking | HeikoS: -g only | 15:31 |
| @HeikoS | wiking: google seems to be confused about whether it makes things slower or not, do you have any idea about this? | 15:34 |
| @HeikoS | though most people seem to reccomend it | 15:34 |
| besser82 | HeikoS: in production binaries / libraries should get stripped ;) | 15:41 |
| besser82 | HeikoS: so they don't ship any debug-symbols inside | 15:41 |
| @HeikoS | besser82: what I am interested in, could that make things slow | 15:43 |
| @HeikoS | in particular in eigen3 with our huge huge library | 15:43 |
| besser82 | HeikoS: yes, it can and will | 15:44 |
| besser82 | HeikoS: there's a command called `strip` which is able to strip the library, so it will just carry ELF not DWARF | 15:44 |
| besser82 | HeikoS: after stripping libshogun should be ~20 MByte ;) | 15:45 |
| @HeikoS | I see | 15:49 |
| @HeikoS | any idea how to do that? :) | 15:49 |
| besser82 | HeikoS: strip -ps libshogun.so ;) | 15:51 |
| @HeikoS | ok cool, good to know | 15:51 |
| wiking | thoralf: ok so one question remains with your unit test... how to provide the proper path to data | 15:51 |
| @HeikoS | wiking: https://github.com/karlnapf/independent-jobs | 15:51 |
| @HeikoS | wiking: thats a draft for computation framework using PBS backends | 15:52 |
| @HeikoS | wiking: very basic, but I already used it for things | 15:52 |
| @HeikoS | most interface parts are taken from lambday's implementation in shogun | 15:52 |
| wiking | cool | 15:53 |
| wiking | will be great to include ref to it in 3.0 release | 15:54 |
| thoralf | wiking: I know. Forgot to say that I had to create a symlink to make it work. | 15:55 |
| wiking | yeah i figured | 15:55 |
| thoralf | wiking: There's no unit test using data. | 15:55 |
| wiking | indeed | 15:55 |
| wiking | thoralf: you could have done the same way as i did for StreamingDenseFeatures | 15:55 |
| thoralf | wiking: Would it be possible that cmake defines the path and/or create a symlink? | 15:56 |
| wiking | thoralf: no | 15:56 |
| wiking | thoralf: unit tests are really not meant to read from data | 15:56 |
| wiking | that's more like examples | 15:56 |
| wiking | so either we put this little test under examples | 15:56 |
| wiking | or generate the input ourselves | 15:56 |
| thoralf | Since the test does not depend on the content of the file, we could easily create a dummy file on-the-file with tempfile | 15:57 |
| thoralf | Only needs to have > 8 lines. | 15:57 |
| wiking | thoralf: as i said i've done this with streamingdense | 15:57 |
| thoralf | wiking: Yes. | 15:58 |
| wiking | and i'll rename this test to streamingsparsefeatures test | 15:58 |
| wiking | and move it under features | 15:58 |
| thoralf | I don't mind. | 15:59 |
| thoralf | You're test does almost the same. | 15:59 |
| wiking | the question is how to generate | 15:59 |
| thoralf | Your | 15:59 |
| wiking | sparse features | 15:59 |
| thoralf | print "0 1:1" 10 times? ;) | 16:00 |
| wiking | hehehe | 16:00 |
| wiking | that's rather stupid | 16:00 |
| thoralf | KISS :) | 16:00 |
| wiking | i mean it would be better to be a bit more complex | 16:00 |
| thoralf | I know. But for now it would work. | 16:01 |
| thoralf | Can extend is as soon as we need more. | 16:01 |
| thoralf | On demand. | 16:01 |
| thoralf | But I think saving sparse features is not hard either. | 16:01 |
| thoralf | Didn't do it so far. | 16:01 |
| thoralf | CSparseFeatures<sg_type>::save(CFile* writer) | 16:02 |
| thoralf | Should be trivial. | 16:02 |
| thoralf | I'll try. Give me a second. :) | 16:02 |
| wiking | yeah that works | 16:02 |
| wiking | i'm just wondering what CFIle i should supply | 16:03 |
| wiking | ok csvfile doesn't work | 16:04 |
| wiking | maybe CLibSVMFile | 16:05 |
| thoralf | AsciiFile is gone? | 16:05 |
| wiking | thoralf: yes | 16:05 |
| Guest55703 | ah | 16:06 |
| Guest55703 | what if we want to save svm machine ? | 16:06 |
| Guest55703 | SerializableAsciiFile is still available right ? | 16:07 |
| wiking | Guest55703: call save_serializable | 16:07 |
| wiking | Guest55703: yes SerializableAsciiFile is available | 16:07 |
| wiking | the two things are unrelated | 16:07 |
| Guest55703 | I ve notice SerializableAsciiFile takes sometimes long time to load, what alternative do we have ? | 16:08 |
| wiking | Guest55703: hdf5 | 16:08 |
| wiking | Guest55703: it's binary format | 16:09 |
| wiking | should be faster | 16:09 |
| thoralf | wiking: LibSVMFile works. | 16:14 |
| wiking | thoralf: yeah i've copy pasted something | 16:14 |
| wiking | from libsvmfile unittest | 16:14 |
| * thoralf created a file with 10 empty lines and it worked well (i.e. generating a segfault) | 16:15 | |
| thoralf | wiking: We need something to create random sparse vectors. | 16:16 |
| wiking | thoralf: libsvmfile_unittest.cc | 16:17 |
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| thoralf | wiking: Thanks. | 16:18 |
| wiking | but it's ok | 16:18 |
| wiking | i'm already finishing up the test | 16:19 |
| thoralf | wiking: Hmm. No more code duplication. I think it would make sense to outsource this random-matrix-stuff to somewhere. | 16:19 |
| thoralf | wiking: Cool. Go ahead. :) | 16:19 |
| thoralf | wiking: I'm not happy with shogun messing up my /tmp: $(ls -la /tmp/ |wc -l)==150528 | 16:20 |
| thoralf | wiking: Wouldn't it be nice to unlink when we're ready? | 16:21 |
| shogun-notifier- | shogun: Viktor Gal :develop * 5513e2c / tests/unit/base/clone_unittest.cc.py: https://github.com/shogun-toolbox/shogun/commit/5513e2c2ef3cadc522c91d6f53d7f251011cadbb | 16:24 |
| shogun-notifier- | shogun: remove .cc from dummy test function name when jinja2 is not available | 16:24 |
| shogun-notifier- | shogun: Viktor Gal :develop * 8abbf8b / / (3 files): https://github.com/shogun-toolbox/shogun/commit/8abbf8b5c4de579af6b90c835dc25ec698c44b66 | 16:24 |
| shogun-notifier- | shogun: Fix StreamingSparseFeatures reading from file (issue #1583) | 16:24 |
| shogun-notifier- | shogun: and refactor the unit test for it so it reads from a generated file | 16:24 |
| shogun-notifier- | shogun: instead of data repository | 16:24 |
| shogun-buildbot | build #2176 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2176 blamelist: Viktor Gal <viktor.gal@maeth.com> | 16:27 |
| wiking | wtf is this | 16:27 |
| shogun-buildbot | build #2175 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2175 blamelist: Viktor Gal <viktor.gal@maeth.com> | 16:39 |
| besser82 | HeikoS: https://github.com/shogun-toolbox/shogun/pull/1614 | 17:03 |
| thoralf | wiking: https://github.com/shogun-toolbox/shogun/pull/1615 | 17:05 |
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| @iglesiasg | sonne|osx, hi there! | 17:21 |
| @iglesiasg | sonne|osx, so what is this filter thing you mentioned in here? https://github.com/shogun-toolbox/shogun-data/pull/18 | 17:21 |
| sonne|osx | besser82: what is https://github.com/shogun-toolbox/shogun/pull/1614/files supposed to do? | 17:21 |
| sonne|osx | iglesiasg: well we should write one! | 17:21 |
| @iglesiasg | sonne|osx, in CSVFile I guess? | 17:22 |
| sonne|osx | no in general | 17:22 |
| sonne|osx | iglesiasg: similar how python does it with gzipfile | 17:22 |
| @iglesiasg | sonne|osx, I see, so it could be possible to do stuff like CSVFile(InfamousFilter(gzippedFile)) | 17:23 |
| @iglesiasg | but it could be use somewhere else too | 17:23 |
| sonne|osx | sth like this yes | 17:23 |
| @iglesiasg | I see | 17:23 |
| @iglesiasg | I think that for the moment I will just extract the file using Python in my example | 17:24 |
| @iglesiasg | I should take care of finishing up LMNN and then the things for release so no time for this filter right now | 17:24 |
| shogun-notifier- | shogun: Thoralf Klein :develop * 0265621 / tests/unit/ (5 files): https://github.com/shogun-toolbox/shogun/commit/0265621379f0c9949883c55059160ee6c183dbb8 | 17:24 |
| shogun-notifier- | shogun: Added "unlink(filename)" to automatic tests for keeping /tmp clean. | 17:24 |
| shogun-notifier- | shogun: Thoralf Klein :develop * 74a84c0 / tests/unit/features/StreamingSparseFeatures_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/74a84c06b8c963d4af03fac5e1c84d538ed2c03c | 17:24 |
| shogun-notifier- | shogun: Added "unlink()" to new StreamingSparseFeatures_unittest. | 17:24 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * a2a7f3f / tests/unit/ (6 files): https://github.com/shogun-toolbox/shogun/commit/a2a7f3fa159567586cb74ebc598a3a591b78a304 | 17:24 |
| shogun-notifier- | shogun: Merge pull request #1615 from tklein23/keep_clean_tmp | 17:24 |
| shogun-notifier- | shogun: | 17:24 |
| shogun-notifier- | shogun: Added "unlink(filename)" to automatic tests for keeping /tmp clean. | 17:24 |
| -!- lisitsyn [~lisitsin@mxs.kg.ru] has quit [Quit: Leaving.] | 17:25 | |
| besser82 | sonne|osx: On el5 atlas' lapack doesn't provide all needed symbols | 17:26 |
| besser82 | sonne|osx: so we need to link against original LAPACK | 17:26 |
| sonne|osx | wiking: any clues what we can do about the build failure on deb1? It seems the breakage occurred quite a while ago. I cannot even find the last working version in waterfall ... | 17:27 |
| besser82 | sonne|osx: but then there are some missing symbols, which are covered by CLAPACK, which is part of ATLAS | 17:27 |
| sonne|osx | besser82: how do you know which one to use? | 17:27 |
| besser82 | sonne|osx: but CLAPACK isn't looked up by FindATLAS | 17:27 |
| besser82 | sonne|osx: so I need to use some regex magic | 17:28 |
| besser82 | sonne|osx: because CLAPACK is ALWAYS avail from ATLAS | 17:28 |
| sonne|osx | besser82: I am just trying to understand what you do... | 17:28 |
| sonne|osx | besser82: so you try to link against clapack ?? | 17:29 |
| besser82 | sonne|osx: and is named like the altlas-lapack.so with an additional c inbetween | 17:29 |
| besser82 | sonne|osx: yes | 17:29 |
| besser82 | sonne|osx: there's need to link against clapack.so then | 17:29 |
| shogun-buildbot | build #2178 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2178 blamelist: Soeren Sonnenburg <sonne@debian.org>, Thoralf Klein <thoralf.klein@zib.de> | 17:30 |
| sonne|osx | besser82: ohh your face appeared on github | 17:30 |
| besser82 | sonne|osx: yes :) | 17:31 |
| besser82 | sonne|osx: here's better one: https://fedoraproject.org/wiki/User:Besser82 | 17:31 |
| sonne|osx | besser82: anyway so in the end you just did add atlas-clapack to the linker right? | 17:31 |
| sonne|osx | flags I mean | 17:32 |
| besser82 | sonne|osx: yes, that's the only thing and only if -DUSE_ORIGINAL_LAPACK=ON | 17:32 |
| besser82 | sonne|osx: in other cases that's not needed :) | 17:32 |
| besser82 | sonne|osx: so it won't break "regular" builds | 17:33 |
| sonne|osx | I wish we had some auto detection for what builds | 17:33 |
| sonne|osx | but ok this is much better than before | 17:33 |
| shogun-notifier- | shogun: Bj?rn Esser :develop * dcd59e9 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/dcd59e93525e50bc00b03fe8370d1fccbd8151e5 | 17:33 |
| shogun-notifier- | shogun: add ATLAS-CLAPACK to linker, when using original LAPACK | 17:33 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * b8753cb / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/b8753cb3372d03b6661d435ef13233c879a7ce1a | 17:33 |
| shogun-notifier- | shogun: Merge pull request #1614 from besser82/fix_lapack_cmake | 17:33 |
| shogun-notifier- | shogun: | 17:33 |
| shogun-notifier- | shogun: add ATLAS-CLAPACK to linker, when using original LAPACK | 17:33 |
| sonne|osx | besser82: I mean sty like a small code snippet that is attempted to compile / run with these flags | 17:33 |
| sonne|osx | s/sty/sth | 17:34 |
| besser82 | sonne|osx: might be a possibility, but this little extra stuff would be needed on el5 or Debian Sarge or even older :) | 17:34 |
| besser82 | sonne|osx: so it's just a small "legacy" hack | 17:35 |
| -!- foulwall [~zhengyang@114.255.40.22] has quit [Ping timeout: 246 seconds] | 17:37 | |
| sonne|osx | besser82: well ok | 17:38 |
| sonne|osx | besser82: btw, you don't happen to know a c based \compression library that operates on files and can use gzip/bzip/... underneath? | 17:39 |
| besser82 | sonne|osx: just a second... | 17:39 |
| sonne|osx | besser82: argh | 17:40 |
| sonne|osx | gtg | 17:40 |
| sonne|osx | cu | 17:40 |
| -!- sonne|osx [~sonne@89.204.137.43] has quit [Quit: sonne|osx] | 17:40 | |
| besser82 | sonney2k: libarchive might be sth. you're looking for: Libarchive is a programming library that can create and read several different streaming archive formats, including most popular tar variants, several cpio formats, and both BSD and GNU ar variants. It can also write shar archives and read ISO9660 CDROM images and ZIP archives. | 17:41 |
| besser82 | sonney2k: It is c-compiled and can virtually read any archive/compression-format around in *nix-land :) | 17:42 |
| @HeikoS | besser82: trying it out, thanks ! | 17:44 |
| besser82 | HeikoS. kk, np :) | 17:44 |
| besser82 | HeikoS: sonne just merged it :) | 17:44 |
| @HeikoS | yep I saw it | 17:44 |
| -!- travis-ci [~travis-ci@ec2-54-242-16-107.compute-1.amazonaws.com] has joined #shogun | 17:45 | |
| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11466763 | 17:45 |
| -!- travis-ci [~travis-ci@ec2-54-242-16-107.compute-1.amazonaws.com] has left #shogun [] | 17:45 | |
| shogun-buildbot | build #2179 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2179 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 17:47 |
| @HeikoS | besser82: it seems to work fine now | 17:51 |
| @HeikoS | cool! | 17:51 |
| besser82 | HeikoS: :D | 17:51 |
| -!- van51 [~van51@athedsl-409794.home.otenet.gr] has joined #shogun | 17:54 | |
| -!- lambday [67157c37@gateway/web/freenode/ip.103.21.124.55] has joined #shogun | 18:02 | |
| lambday | HeikoS: hi | 18:02 |
| @HeikoS | lambday: hey! | 18:02 |
| lambday | I have a proposal | 18:02 |
| @HeikoS | lambday: tell me :) | 18:02 |
| shogun-buildbot | build #2180 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2180 blamelist: Soeren Sonnenburg <sonne@debian.org> | 18:03 |
| lambday | in the paper, they mentioned that for large condition number CG-M takes ages to converge... and the main motivation towards this approach is to be memory efficient for really massive matrices | 18:03 |
| lambday | HeikoS: so, in the ipython demo, can I first use a really really massive matrix and show that this works, and then take ozone and show that for poor condition number convergence is really slow | 18:04 |
| lambday | I mean, otherwise the main point would be missed | 18:04 |
| lambday | I can use the small matrix, but I want to use a huge data for which cholesky would be just pathetic | 18:05 |
| lambday | and show that for reasonable condition numbers, this indeed is a nice solution | 18:05 |
| @HeikoS | lambday: sorry what is the point and your plan? | 18:05 |
| @HeikoS | ah | 18:05 |
| @HeikoS | yeah, the python notebooks should contain reasonable conditioned matrices | 18:06 |
| lambday | also, ozone will show the drawbacks | 18:06 |
| @HeikoS | yeah, but that is part of the game | 18:06 |
| @HeikoS | you should definitely include it | 18:06 |
| lambday | this west0479 is really small | 18:06 |
| lambday | exactly | 18:06 |
| @HeikoS | just set the max iterations small and make a note that users can set larger to get more accurate results | 18:06 |
| lambday | that's what I was thinking about | 18:06 |
| @HeikoS | sounds good | 18:06 |
| lambday | HeikoS: yeah, but for quick convergence I want to use another matrix for which our method *does* work really nicely | 18:07 |
| @HeikoS | yes, include a massive matrix with nice condition number | 18:07 |
| lambday | HeikoS: so should I randomly generate one? | 18:07 |
| @HeikoS | the west matrix is horribly conditioned, its an illustration that things even work then -- but take long | 18:07 |
| @HeikoS | there should be | 18:07 |
| lambday | yes | 18:08 |
| @HeikoS | 1.) small easy matrix | 18:08 |
| @HeikoS | 2.) huge huge easy matrix | 18:08 |
| @HeikoS | 3.) small hard matrix (west) | 18:08 |
| @HeikoS | 4.) large hard matrix | 18:08 |
| @HeikoS | and maybe one that is huge and easy *and* real life data | 18:08 |
| lambday | for large hard, I have ozone | 18:09 |
| lambday | searching for huge but easy | 18:09 |
| @HeikoS | lambday: we can ask daniel for that and him whether he has some nice real life PSD matrix which is huge but well conditioned | 18:09 |
| @HeikoS | lambday: do you want to include the ozone likelihood in your notebook? | 18:09 |
| @HeikoS | and pictures? | 18:09 |
| @HeikoS | or rather focus on the matrices? | 18:10 |
| @HeikoS | lambday: you can also illustrate all those solvers in the notebook | 18:10 |
| lambday | HeikoS: I wish I can, but I need to understand the estimates for that | 18:10 |
| lambday | HeikoS: yeah already planned | 18:10 |
| lambday | this is what I thought | 18:10 |
| lambday | 1. introduction - theoretical background, just a bit | 18:10 |
| @HeikoS | lambday: I mean you can motivate the usage | 18:11 |
| @HeikoS | you can use my code for the model | 18:11 |
| lambday | 2. linear solvers | 18:11 |
| @HeikoS | I can also share some plotting code | 18:11 |
| lambday | 3. logdet | 18:11 |
| @HeikoS | then there is a motivation | 18:11 |
| @HeikoS | you can also reference our arxiv paper and state that this is used in there | 18:11 |
| wiking | sonne|work: ideas wtf is happening with buildbots? | 18:11 |
| lambday | HeikoS: that would be great! | 18:11 |
| @HeikoS | including the RR would be too much though | 18:11 |
| @HeikoS | lambday: check my github account and ozone-roulette | 18:11 |
| @HeikoS | this contains code for computing the marginal likelihood for the ozone model | 18:11 |
| @HeikoS | and my poster contains the model itself and the log marginal likelihood | 18:12 |
| lambday | alright | 18:12 |
| @HeikoS | you can then say: "This can be used for performing exact MCMC on large models" | 18:12 |
| @HeikoS | and compute 1 estimate with low max iteration number ;) | 18:12 |
| @HeikoS | just need plotting code, but will send you :) | 18:12 |
| @HeikoS | then it will look very cool | 18:12 |
| lambday | yeah :D | 18:12 |
| @HeikoS | lambday: btw try to be not tooo formal but rather motivate things, why we want to do this etc | 18:13 |
| lambday | alright.. | 18:13 |
| @HeikoS | lambday: I think with all that and your other ideas, it will look awesome | 18:13 |
| lambday | let's see... I am hopeful :) | 18:14 |
| @HeikoS | lambday: https://github.com/karlnapf/ozone-roulette | 18:14 |
| @HeikoS | lambday: btw I also have your computation framework running in python with a batch cluster backend https://github.com/karlnapf/independent-jobs | 18:14 |
| lambday | HeikoS: awesome! | 18:15 |
| lambday | HeikoS: when are we going to do this inside shogun? :D | 18:15 |
| @HeikoS | lambday: hopefully soon | 18:15 |
| @HeikoS | lambday: but too many other urgent things to do currently | 18:15 |
| lambday | when is the 3.0 release? | 18:16 |
| @HeikoS | lambday: and there are some hacks in there that I dont know whether its possible to do them | 18:16 |
| @HeikoS | lambday: two weeks or so | 18:16 |
| @HeikoS | lambday: we will need your help :) | 18:16 |
| lambday | the ipython notebook idea for end term is awesome by the way! really motivates the users | 18:16 |
| @HeikoS | lambday: yeah, that will be really useful, the three I have seen so far are very cool, waiting for yours and romans | 18:17 |
| lambday | HeikoS: hehe.. :D I'll try my best | 18:17 |
| @HeikoS | lambday: let me know if you need any tex stuff | 18:17 |
| @HeikoS | like poster sourcecode or so .... | 18:18 |
| wiking | mmm we have a problem with r_modular + CScalarResult<>: https://travis-ci.org/shogun-toolbox/shogun/jobs/11466773#L3055 | 18:18 |
| wiking | when did this change? | 18:18 |
| @HeikoS | these plots that I have on the poster would be very nice | 18:18 |
| lambday | HeikoS: yeah | 18:18 |
| @HeikoS | wiking: sonney2k changed some R stuff | 18:18 |
| lambday | wiking: last week | 18:18 |
| @HeikoS | ah | 18:18 |
| @HeikoS | you know better :) | 18:18 |
| wiking | HeikoS: it has nothing to do with sonney2k change | 18:18 |
| lambday | wiking: checking | 18:19 |
| -!- hushell [~hushell@c-98-232-178-161.hsd1.or.comcast.net] has quit [Ping timeout: 260 seconds] | 18:23 | |
| lambday | wiking: so far I understand, I need to change the name "result" to something else! | 18:31 |
| lambday | because swig for R uses that same name to define something else (SEXPREC) :-/ | 18:32 |
| lambday | no that's not it | 18:34 |
| shogun-notifier- | shogun: Viktor Gal :develop * cfdbbca / / (2 files): https://github.com/shogun-toolbox/shogun/commit/cfdbbcaef92362b27cb4bf77e25185b984b97452 | 18:35 |
| shogun-notifier- | shogun: Remove regression_svrlight_modular.cs if SVMLight is disabled (issue #1600) | 18:35 |
| shogun-notifier- | shogun: use appropriate macro in PermutationMatrix_unittest.cc | 18:35 |
| -!- thoralf [~thoralf@enki.zib.de] has quit [Quit: Konversation terminated!] | 18:37 | |
| wiking | besser82: see my comments about https://github.com/shogun-toolbox/shogun/issues/1609 | 18:44 |
| besser82 | wiking: use "LIB_INSTALL_DIR" then | 18:45 |
| wiking | besser82: if it's set i guess.. | 18:46 |
| besser82 | wiking: with a conditional around ;) | 18:46 |
| wiking | because that's a none standard fedora hack | 18:46 |
| besser82 | wiking: nope | 18:46 |
| wiking | yes | 18:46 |
| besser82 | wiking: LIB_INSTALL_DIR | 18:46 |
| wiking | there's no LIB_INSTALL_DIR in cmake itself | 18:46 |
| wiking | ever | 18:46 |
| besser82 | wiking: that's the usual define for where to install the libs ;) | 18:47 |
| wiking | usual = in case of fedora | 18:47 |
| wiking | nobody else uses this | 18:47 |
| wiking | i've been now googling around | 18:47 |
| besser82 | wiking: SUSE, openSuse, Centos, RHEL | 18:47 |
| wiking | yes | 18:47 |
| wiking | fedora and alike | 18:47 |
| wiking | meaning *rpm | 18:47 |
| wiking | anything that is else doesn't have it | 18:47 |
| wiking | archlinux, debian, ubuntu etc | 18:48 |
| besser82 | wiking: debain has multiarch dirs | 18:48 |
| besser82 | wiking: like ubuntu | 18:48 |
| wiking | besser82: as well as osx | 18:48 |
| besser82 | wiking: l/usr/lib/$shitty-tuple | 18:48 |
| wiking | and opensolaris | 18:48 |
| wiking | and others | 18:48 |
| lambday | HeikoS: http://www.cise.ufl.edu/research/sparse/matrices/list_by_dimension.html | 18:48 |
| lambday | wiking: I am sorry I didn't get the issue :( | 18:48 |
| wiking | lambday: i dont know what's the problem | 18:49 |
| lambday | wiking: it has to be something with some changes in swig/R in travis | 18:49 |
| wiking | but the problem is that couple of days ago it compiled fine | 18:49 |
| wiking | no | 18:49 |
| wiking | i have the same on fatbot as well | 18:49 |
| @HeikoS | lambday: nice page! try to find a nicely conditioned one that is >300000 | 18:49 |
| lambday | wiking: because when I sent the PR it compiled fine | 18:49 |
| wiking | lambday: i highly doubt it | 18:49 |
| lambday | HeikoS: checking :) | 18:49 |
| wiking | lambday: gimme the PR number | 18:49 |
| @HeikoS | lambday: sadly they did not put the condition number | 18:49 |
| lambday | HeikoS: yeah :( | 18:50 |
| lambday | wiking: yeah just a sec | 18:50 |
| @HeikoS | lambday: aim for something very sparse with a lot of structure | 18:50 |
| wiking | lambday: https://github.com/shogun-toolbox/shogun/pull/1586 | 18:50 |
| wiking | was it this one? | 18:50 |
| @HeikoS | man these graphs look so cool! | 18:50 |
| lambday | HeikoS: they sure do | 18:50 |
| lambday | wiking: yes | 18:50 |
| shogun-buildbot | build #2181 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2181 blamelist: Viktor Gal <viktor.gal@maeth.com> | 18:50 |
| lambday | :D | 18:51 |
| wiking | lambday: https://travis-ci.org/shogun-toolbox/shogun/jobs/11412632#L3021 | 18:51 |
| wiking | HeikoS: ^ you've merged this breaker... | 18:51 |
| wiking | shogun-buildbot: force build --branch=develop 'deb1 - libshogun' | 18:51 |
| shogun-buildbot | build forced [ETA 4m14s] | 18:51 |
| shogun-buildbot | I'll give a shout when the build finishes | 18:51 |
| wiking | lambday: so it's there and it's not travis as u can see | 18:52 |
| shogun-buildbot | build #2182 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2182 | 18:52 |
| @HeikoS | wiking: I merged since this looked like ongoing R business to me, sorry | 18:53 |
| @HeikoS | wiking: also isnt R excluded? | 18:53 |
| lambday | wiking: I am sorry I can't get a clue | 18:53 |
| @HeikoS | I though is was allowed to fail | 18:53 |
| lambday | HeikoS: yes R is allowed failures :D | 18:53 |
| wiking | it's allowed to fail | 18:53 |
| wiking | as we have other issues | 18:54 |
| besser82 | wiking: where inside CMakeLists the libdir is set? | 18:54 |
| @HeikoS | wiking: is it really this patch that causes it? | 18:54 |
| wiking | HeikoS: yes | 18:54 |
| @HeikoS | or is it just this commit that discovered that there is a problem? | 18:54 |
| wiking | if u step back in travis builds one build you'll see it's examples that fails | 18:54 |
| lambday | HeikoS: it has issues since in this patch I added CScalarResult and CVectorResult etc.. | 18:54 |
| wiking | not the interface itself | 18:54 |
| lambday | ...to modular interface | 18:54 |
| wiking | besser82: well the libshogun install 'path' is in src/shogun/CMakeLists.txt | 18:55 |
| besser82 | wiking: thx! will have a look on it ;) | 18:55 |
| lambday | wiking: HeikoS: R uses some internal structure SEXPREC | 18:56 |
| besser82 | wiking: the ruby thing I already found and can change it with a sed-one-liner in spec-file ;) | 18:56 |
| @HeikoS | wiking: but thats an R issue isnt it? | 18:56 |
| lambday | which is incomplete, don't know why | 18:56 |
| @HeikoS | I have no idea about this stuff | 18:56 |
| lambday | neither do I | 18:56 |
| @HeikoS | why is it caused by these classes | 18:56 |
| wiking | besser82: i'll add a test for LIB_INSTALL_DIR | 18:56 |
| @HeikoS | they are very simple | 18:56 |
| wiking | besser82: if it's there then libshogun is going to be installed in LIB_INSTALL_DIR | 18:56 |
| wiking | ok? | 18:56 |
| besser82 | wiking: that would be really nice of you :) | 18:57 |
| besser82 | wiking: for lua, too, then? | 18:58 |
| shogun-notifier- | shogun: Viktor Gal :develop * 59b54f6 / src/shogun/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/59b54f65a6855406db26ffe2ac305ec72facc20e | 18:59 |
| shogun-notifier- | shogun: Towards fixing issue #1609 | 18:59 |
| shogun-notifier- | shogun: install libshogun to LIB_INSTALL_DIR if it's set | 18:59 |
| wiking | besser82: have u checked how lua install path is defined? | 18:59 |
| besser82 | wiking: yes :) | 19:00 |
| besser82 | wiking: LIB_SUFFIX might be useful there ;) | 19:00 |
| wiking | besser82: i'll just use LIB_INSTALL_DIR | 19:00 |
| wiking | and then just put there that into the regexp if it's set | 19:01 |
| besser82 | wiking: or so ;) | 19:01 |
| besser82 | wiking: I'm fine with either :) | 19:01 |
| wiking | shogun-buildbot: force build --branch=develop 'deb1 - libshogun' | 19:03 |
| shogun-buildbot | build forced [ETA 4m14s] | 19:03 |
| shogun-buildbot | I'll give a shout when the build finishes | 19:03 |
| -!- HeikoS [~heiko@nat-179-139.internal.eduroam.ucl.ac.uk] has quit [Ping timeout: 245 seconds] | 19:06 | |
| shogun-notifier- | shogun: Viktor Gal :develop * 473ed06 / src/interfaces/lua_modular/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/473ed06e29d56f240a4f296da4d4f6ab36a4fa93 | 19:08 |
| shogun-notifier- | shogun: Install lua modular interface to under LIB_INSTALL_DIR if it's set | 19:08 |
| shogun-notifier- | shogun: issue #1609 | 19:08 |
| shogun-buildbot | Hey! build deb1 - libshogun #2184 is complete: Exception [exception] | 19:10 |
| shogun-buildbot | Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2184 | 19:10 |
| besser82 | wiking: thanks a lot ;) | 19:10 |
| wiking | sonne|work: i think /tmp is full on buildslave4 | 19:14 |
| -!- HeikoS [~heiko@nat-179-139.internal.eduroam.ucl.ac.uk] has joined #shogun | 19:16 | |
| -!- mode/#shogun [+o HeikoS] by ChanServ | 19:16 | |
| shogun-buildbot | build #2185 of deb1 - libshogun is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2185 blamelist: Viktor Gal <viktor.gal@maeth.com> | 19:16 |
| shogun-buildbot | build #2183 of deb1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2183 blamelist: Viktor Gal <viktor.gal@maeth.com> | 19:18 |
| @HeikoS | besser82: around? | 19:19 |
| @HeikoS | I have run into an annoying problem | 19:19 |
| @HeikoS | which is: shogun needs classic lapack, and python needs atlas lapack | 19:19 |
| -!- lisitsyn [~lisitsyn@fb2-lo1.global63.net] has joined #shogun | 19:20 | |
| @HeikoS | depending which path is first in LD_LIBRARY_PATH, one of them works the other doesnt | 19:20 |
| @HeikoS | but since I want to use shogun AND scipy from the same python session, I dont know what to do | 19:21 |
| wiking | shogun-buildbot: force build --branch=develop 'deb1 - libshogun' | 19:22 |
| shogun-buildbot | build forced [ETA 4m14s] | 19:22 |
| shogun-buildbot | I'll give a shout when the build finishes | 19:22 |
| @HeikoS | wiking: any ideas? | 19:23 |
| @HeikoS | ^ | 19:23 |
| shogun-buildbot | build #2186 of deb1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2186 | 19:25 |
| wiking | yeeey buildbot back in business | 19:25 |
| besser82 | HeikoS: sure! go ahead :) | 19:27 |
| @HeikoS | besser82: see above | 19:27 |
| besser82 | HeikoS: btw. cuold you merge, plz? ---> https://github.com/shogun-toolbox/shogun/pull/1616 | 19:27 |
| besser82 | HeikoS: will investigate your issue meanwhile ;) | 19:28 |
| besser82 | HeikoS: do have any error messages for me? | 19:28 |
| shogun-notifier- | shogun: Bj?rn Esser :develop * 0a92dab / examples/undocumented/matlab_and_octave/tests/ (2 files): https://github.com/shogun-toolbox/shogun/commit/0a92dab1d98340073e53aa2c56b28c29bbe53663 | 19:28 |
| shogun-notifier- | shogun: get rid of rpmlint "W: wrong-file-end-of-line-encoding" | 19:28 |
| shogun-notifier- | shogun: Bj?rn Esser :develop * ab0edc7 / src/shogun/ (10 files): https://github.com/shogun-toolbox/shogun/commit/ab0edc793de5b9143c2b3d2b96ef6509ce863076 | 19:28 |
| shogun-notifier- | shogun: get rid of rpmlint "E: incorrect-fsf-address" | 19:28 |
| shogun-notifier- | shogun: Bj?rn Esser :develop * 198eb1c / examples/descriptions/ (3 files): https://github.com/shogun-toolbox/shogun/commit/198eb1c3c131a0fc149865140827d92c696ce60a | 19:28 |
| shogun-notifier- | shogun: get rid of rpmlint "W: file-not-utf8" | 19:28 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 9bae02f / / (15 files): https://github.com/shogun-toolbox/shogun/commit/9bae02f15beed080e023bd2137912c5d1557ccd5 | 19:28 |
| shogun-notifier- | shogun: Merge pull request #1616 from besser82/fix_encoding | 19:28 |
| shogun-notifier- | shogun: | 19:28 |
| shogun-notifier- | shogun: get rid of some rpmlint issues | 19:28 |
| @HeikoS | besser82: well, symbol not found | 19:28 |
| @HeikoS | either from running shogun unit-tests | 19:29 |
| @HeikoS | or python -c 'from scipy.linalg.basic import solve_triangular' | 19:29 |
| besser82 | HeikoS: sth. more detailed? | 19:29 |
| @HeikoS | ok | 19:29 |
| besser82 | HeikoS: like stderr? | 19:29 |
| @HeikoS | [ RUN ] LogDetEstimator.sample_ratapp_probing_sampler | 19:29 |
| @HeikoS | ./shogun-unit-test: symbol lookup error: /home/ucabhst/shogun/build/src/shogun/libshogun.so.14: undefined symbol: dstemr_ | 19:29 |
| @HeikoS | thats the one from shogun-unit-tests | 19:30 |
| @HeikoS | ImportError: /share/apps/python-2.7.1/lib/python2.7/site-packages/scipy/linalg/clapack.so: undefined symbol: clapack_sgesv | 19:30 |
| @HeikoS | and thats the one from the python import | 19:30 |
| @HeikoS | so it turns out that scipy needs the atlas-lapack version | 19:30 |
| besser82 | ldd $shogun.so ? | 19:30 |
| @HeikoS | where my shogun can only work with the classic one | 19:30 |
| besser82 | HeikoS: ldd $shogun.so ? | 19:30 |
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| @HeikoS | besser82: did you get that? | 19:32 |
| @HeikoS | was kicked due to flooding | 19:32 |
| besser82 | HeikoS: not fully :( | 19:32 |
| @HeikoS | ok let me pastebin | 19:32 |
| besser82 | HeikoS: would be an idea :) | 19:32 |
| @HeikoS | http://pastebin.com/LEYz0FiL | 19:33 |
| shogun-buildbot | build #2187 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2187 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 19:33 |
| @HeikoS | besser82: and with | 19:34 |
| @HeikoS | /usr/lib64/atlas:/usr/lib64:/home/ucabhst/shogun-install/lib:/opt/gridengine/lib/lx26-amd64, python works but shogun doesnt | 19:35 |
| @HeikoS | and /usr/lib64:/home/ucabhst/shogun-install/lib:/opt/gridengine/lib/lx26-amd64 does vice versa with the errors I sent | 19:35 |
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| @HeikoS | besser82: and obviously the ldd changes if the LD_PATH changes | 19:37 |
| besser82 | HeikoS. I know ;) | 19:37 |
| @HeikoS | besser82: I could get around this via exposing a triangular solver to the modular interfaces, but this seems not good | 19:37 |
| @HeikoS | since I cannot use any scipy stuff with shogun then | 19:37 |
| besser82 | HeikoS: Let me investigate and solve ;) | 19:38 |
| @HeikoS | besser82: can one merge two shared libs? | 19:38 |
| @HeikoS | then I can put that merged thing into my home and link against it | 19:38 |
| besser82 | HeikoS: that's not possible, unfortunately | 19:39 |
| @HeikoS | scipy seems to be picky and only accepts the atlas-lapack | 19:39 |
| @HeikoS | shogun is picky and only takes my non-atlas lapack | 19:39 |
| besser82 | HeikoS: possibly, but nothing which can't be solved ;) | 19:39 |
| @HeikoS | hehe I like your approach | 19:40 |
| @HeikoS | getting some coffee ... | 19:40 |
| besser82 | HeikoS: kk :) Thanks for the compliment! | 19:40 |
| shogun-buildbot | build #1743 of bsd1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1743 | 19:41 |
| besser82 | HeikoS: can you please paste the output of `yum deplist scipy` ? | 19:42 |
| besser82 | HeikoS: on fpaste || pastebin? | 19:42 |
| @HeikoS | thats empty | 19:43 |
| @HeikoS | scipy is installed to /shape/apps | 19:43 |
| besser82 | HeikoS: yes, el5, forgot... | 19:43 |
| shogun-buildbot | build #2188 of deb1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2188 | 19:43 |
| besser82 | HeikoS: the the problem is that ver of scipy is not properly configured :( | 19:44 |
| besser82 | HeikoS: at least it seems... | 19:44 |
| @HeikoS | besser82: ok, what should I tell the guy? | 19:44 |
| @HeikoS | besser82: or can I install locally instead? | 19:44 |
| @HeikoS | compile locally or so? | 19:44 |
| @HeikoS | or even virtual-env? | 19:44 |
| besser82 | HeikoS: might be one option, or let me build some backported rpm ;) | 19:44 |
| @HeikoS | the guy told me I dont need to since he can do things, but since nothing works that might be an option | 19:45 |
| shogun-buildbot | build #1744 of bsd1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1744 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 19:45 |
| @HeikoS | besser82: can I install that even? | 19:45 |
| besser82 | HeikoS: no, but your admin should :) | 19:45 |
| @HeikoS | besser82: I dont think he likes that | 19:45 |
| @HeikoS | besser82: what about just virtual-enving a full python distribution? | 19:45 |
| besser82 | HeikoS: would be the other possibility | 19:46 |
| besser82 | HeikoS: but your admin can fetch my build from fedora-infrastructure ;) | 19:46 |
| @HeikoS | besser82: or just scipy | 19:46 |
| besser82 | HeikoS: possibly scipy might be enough | 19:46 |
| @HeikoS | mmmh dont know I dont like to interact since things take so long | 19:46 |
| besser82 | HeikoS: but let me check first for a simpler approach :) | 19:46 |
| @HeikoS | so try-error is annoying this way | 19:47 |
| besser82 | HeikoS: yes | 19:47 |
| besser82 | HeikoS: why you admin's don't use lxc? :D | 19:47 |
| besser82 | HeikoS: would make thind real easy for all ;) | 19:47 |
| besser82 | s/thind/things | 19:47 |
| @HeikoS | besser82: dont ask, the worst thing is that this is different for every computer you touch | 19:47 |
| besser82 | HeikoS: phuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu! | 19:48 |
| @HeikoS | virutal-env is not installed | 19:49 |
| @HeikoS | man | 19:49 |
| @HeikoS | I dont know how long I should spend with this any longer | 19:49 |
| @HeikoS | just installing software | 19:49 |
| @HeikoS | besser82: whats your suggestion? | 19:50 |
| besser82 | chroot in your home :) | 19:50 |
| @HeikoS | ? | 19:50 |
| wiking | HeikoS: yeah why dont u prepare a custom slim os and chroot it | 19:51 |
| shogun-buildbot | build #97 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/97 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Bj?rn Esser <bjoern.esser@gmail.com> | 19:51 |
| @HeikoS | besser82, wiking because I dont know about these things, how would that work? | 19:51 |
| wiking | HeikoS: ok dont worry | 19:52 |
| wiking | HeikoS: hopefully tonight i'll get ourselves a virtualenved image | 19:52 |
| wiking | and then you can use that anywhere | 19:52 |
| wiking | :) | 19:52 |
| wiking | HeikoS: that's for ipython notebook | 19:52 |
| besser82 | HeikoS: I can give you a pristine fedora-chroot | 19:52 |
| @HeikoS | wiking: wow, were you doing that anyways=? | 19:52 |
| @HeikoS | ah | 19:52 |
| besser82 | HeikoS: just un-tar && go ;) | 19:52 |
| @HeikoS | so then I can just somehow open this and have everything there? | 19:52 |
| wiking | HeikoS: yes | 19:52 |
| @HeikoS | what about paths/libs dependencies etc? | 19:53 |
| wiking | HeikoS: it's within that | 19:53 |
| @HeikoS | is it fully self-contained? | 19:53 |
| wiking | HeikoS: yes | 19:53 |
| @HeikoS | what does it need then? | 19:53 |
| wiking | HeikoS: just pray that u dont have harsh quota-s on your home | 19:53 |
| @HeikoS | wiking: what about thinkgs like scipy? | 19:53 |
| @HeikoS | thats not needed for shogun | 19:53 |
| @HeikoS | and other software | 19:53 |
| @HeikoS | can one install things? | 19:53 |
| wiking | HeikoS: it's needed for python_modular examples | 19:53 |
| wiking | so it'll be there | 19:54 |
| @HeikoS | and scikits.cholmod? | 19:54 |
| wiking | HeikoS: i'm planning to add this http://thomassileo.com/blog/2012/11/19/setup-a-remote-ipython-notebook-server-with-numpyscipymaltplotlibpandas-in-a-virtualenv-on-ubuntu-server/ | 19:54 |
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| @HeikoS | wiking: ok this stuff would actually be enough for me | 19:54 |
| wiking | HeikoS: what other sw woudl u need? | 19:54 |
| @HeikoS | wiking: let me check | 19:55 |
| @HeikoS | wiking: how about pulling/rebuilding shogun? | 19:55 |
| wiking | if u need any other image let me know | 19:55 |
| wiking | HeikoS: ? | 19:55 |
| wiking | HeikoS: that's another story | 19:55 |
| wiking | i'll prepare the image + a shogun in it | 19:55 |
| @HeikoS | wiking: like I make changes to the development branch | 19:55 |
| wiking | yeah i know u want everything | 19:55 |
| wiking | there'll be a shogun git repo in that image | 19:56 |
| @HeikoS | wiking: just asking ;) | 19:56 |
| wiking | and u do with that whatever u want | 19:56 |
| wiking | but in our case it'll be a nightly updated image | 19:56 |
| @HeikoS | what about git pull and makeing? | 19:56 |
| wiking | since i want to mount that image with R-O mode | 19:56 |
| wiking | i mean R/O mode | 19:56 |
| @HeikoS | ah | 19:56 |
| @HeikoS | I see | 19:56 |
| @HeikoS | for security stuff | 19:56 |
| wiking | yes | 19:56 |
| @HeikoS | wiking: ok that is not enough for me, sadly, maybe later once things are stable | 19:57 |
| wiking | but then again u do whatever u want | 19:57 |
| wiking | i mean u can do whatever with that image | 19:57 |
| wiking | and modify it as u wish | 19:57 |
| @HeikoS | wiking: so I could mount rw and then git pull blabla | 19:57 |
| wiking | and then just distrib that image around | 19:57 |
| wiking | yes | 19:57 |
| wiking | what u do with that image | 19:57 |
| wiking | is really up to you | 19:57 |
| wiking | the repo with a dev branch in it will be available | 19:58 |
| wiking | and it'll have all the required packages | 19:58 |
| wiking | apart from like mosek | 19:58 |
| @HeikoS | wiking: so also compiler etc? | 19:58 |
| wiking | yes | 19:58 |
| wiking | as it needs it for building | 19:58 |
| wiking | i mean i'll rebuild the shogun in that image every night | 19:58 |
| wiking | but you rebuild it whenever u want it | 19:59 |
| @HeikoS | wiking: hey man, that sounds too good to be true | 19:59 |
| wiking | we have such image based on fedora 19 | 19:59 |
| wiking | out of box | 19:59 |
| @HeikoS | I already spent a week on getting all this shit to work | 19:59 |
| wiking | so if u dont have a problem with fedora | 19:59 |
| wiking | i can tar gz u that image :P | 19:59 |
| @HeikoS | wiking: I dont care at all about internals, just care about things working ;) | 19:59 |
| wiking | HeikoS: it's 12 gigs | 20:00 |
| @HeikoS | wiking: thats fine | 20:00 |
| wiking | HeikoS: but i'll try to make a slim one assap | 20:00 |
| wiking | we can even distrib this image | 20:00 |
| wiking | as like | 20:00 |
| wiking | here u go | 20:00 |
| wiking | have this as a VM image | 20:01 |
| @HeikoS | wiking: so how certain are you about tonight about this? | 20:01 |
| wiking | and you have shogun out of box | 20:01 |
| @HeikoS | wiking: yeah very nice | 20:01 |
| wiking | well i'll have a coffe now | 20:01 |
| wiking | and i'll start | 20:01 |
| @HeikoS | wiking: ah there is a trick | 20:01 |
| @HeikoS | the cluster software | 20:01 |
| wiking | what's with it? | 20:01 |
| @HeikoS | the SGE stuff | 20:01 |
| @HeikoS | can I still run commands like qsub? | 20:01 |
| wiking | well | 20:01 |
| wiking | is there a package for it? | 20:01 |
| wiking | or that's some proprietary stuff? | 20:02 |
| @HeikoS | wiking: no since its all installed locally and I have no idea | 20:02 |
| wiking | ok what is the cluster stuff u r using? | 20:02 |
| wiking | but i mean man how the fuck is it possible that u have a cluster | 20:02 |
| wiking | and the nodes are not the exact same distribs | 20:02 |
| @HeikoS | Sun stuff | 20:02 |
| @HeikoS | wiking: thats solved | 20:02 |
| wiking | who to the hell maintains such cluster? | 20:02 |
| wiking | where nodes are like 'whatever' | 20:03 |
| @HeikoS | I just want to install on my login node currently | 20:03 |
| wiking | ok | 20:03 |
| wiking | i'll start up a new image | 20:03 |
| @HeikoS | wiking: dude I dont know how can that be, I spend days over days on this shit, totally stresses me out | 20:03 |
| @HeikoS | all these weird problems | 20:03 |
| wiking | yeah | 20:03 |
| @HeikoS | why the hell is that stupid symbol not in atlas-lapack | 20:03 |
| @HeikoS | I dont know | 20:03 |
| @HeikoS | why doesnt scipy work with the classic lapack | 20:04 |
| @HeikoS | I dont know | 20:04 |
| wiking | hehe | 20:04 |
| wiking | ok | 20:04 |
| wiking | i'll give u a ping as soon as i'm ready | 20:04 |
| @HeikoS | wiking: cool cheers | 20:04 |
| wiking | i'll try to find an ubuntu chroot image | 20:04 |
| wiking | and then setup everything in it | 20:04 |
| besser82 | HeikoS: that stupid symbol isn't in THAT particular version of atlas :) | 20:04 |
| besser82 | HeikoS: on el6 it is :) | 20:05 |
| wiking | fuck it | 20:06 |
| wiking | it's going to be archlinux | 20:06 |
| wiking | :) | 20:06 |
| @iglesiasg | yaay! Tapkee is officially published now!! | 20:06 |
| wiking | iglesiasg: ^ agree? :) | 20:06 |
| @iglesiasg | http://jmlr.org/papers/v14/lisitsyn13a.html | 20:06 |
| @iglesiasg | wiking, sure! :) | 20:06 |
| wiking | congratz | 20:06 |
| wiking | i've put archlinux on my raspberry pi | 20:06 |
| wiking | and it's really cool | 20:06 |
| @iglesiasg | lisitsyn, vodking time | 20:06 |
| @iglesiasg | wiking, nice! what are you doing with it? | 20:07 |
| wiking | iglesiasg: usual shit at the moment | 20:07 |
| wiking | media server | 20:07 |
| wiking | + measuring pool temperature | 20:07 |
| @iglesiasg | hehe | 20:07 |
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| wiking | + gps | 20:07 |
| @iglesiasg | wiking, do you have a pool man? | 20:07 |
| wiking | and now i'm trying to do water clorization | 20:07 |
| wiking | iglesiasg: not mine | 20:07 |
| wiking | iglesiasg: it's my wife's parents house | 20:07 |
| wiking | they do have a pool | 20:08 |
| wiking | :) | 20:08 |
| shogun-buildbot | build #1196 of rpm1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1196 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 20:08 |
| @iglesiasg | aah I see. Awesome anyway -- you get to bath there :D | 20:08 |
| wiking | anyhow | 20:08 |
| wiking | i'm going to get now a coffee | 20:08 |
| lisitsyn | ha | 20:08 |
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| wiking | and then i'll see wtf is with this ipython image | 20:09 |
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| HeikoS1 | wiking: I just wrote the guy to ask whether one can submit jobs from another computer, lets see what he says | 20:11 |
| HeikoS1 | wiking: installing python locally in the meantime | 20:12 |
| lambday | HeikoS1: found a 715,176x715,176 spd, nnz=4,817,870, nnz(cholesly)=177,279,446 (with AMD), max/min eigvals=91873.0503669/0.0299489432691, colors required=13 | 20:14 |
| lambday | Lanczos converges within ~2000 iterations | 20:14 |
| HeikoS1 | lambday: sweet! :) how long does that take? How long does the family solver take? | 20:14 |
| lambday | HeikoS1: checking | 20:15 |
| lambday | CG-M did not converge within default (1000) iterations though | 20:16 |
| HeikoS1 | at least 2000 I guess | 20:16 |
| lambday | ~10^6 condition number here too :( | 20:16 |
| HeikoS1 | lambday: better than 10^10 | 20:17 |
| HeikoS1 | lambday: could also add a ridge on the orig matrix | 20:17 |
| lambday | HeikoS1: that would help a bit ain't it | 20:18 |
| HeikoS1 | lambday: try it | 20:18 |
| shogun-buildbot | build #1478 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1478 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Bj?rn Esser <bjoern.esser@gmail.com> | 20:18 |
| lambday | checking | 20:19 |
| lambday | err stupid me! was using A'A+I code for this one too argh! | 20:19 |
| HeikoS1 | ? | 20:19 |
| lambday | was trying using the pymodular script that I added | 20:20 |
| lambday | just changed the name but forgot to use actual matrix, instead was computing A^TA+I that was required for west0479 | 20:20 |
| HeikoS1 | lambday: I see | 20:21 |
| HeikoS1 | so what is the new one doing? | 20:21 |
| HeikoS1 | lambday: actually doesnt matter if it stays sparse and is nice :) | 20:21 |
| lambday | gotta check.. new one is already spd | 20:21 |
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| shogun-buildbot | build #1825 of deb3 - modular_interfaces is complete: Failure [failed compile r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1825 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Bj?rn Esser <bjoern.esser@gmail.com> | 20:26 |
| wiking | HeikoS1: imho this wont be good for u | 20:28 |
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| HeikoS1 | wiking: at least now shogun AND scipy work, just tried it | 20:29 |
| @iglesiasg | all right, dinner time. See you later! | 20:29 |
| wiking | because the problem is that u need some stuff to mount | 20:29 |
| wiking | and for that u would need root privilages | 20:29 |
| HeikoS1 | ah | 20:29 |
| HeikoS1 | ...... | 20:29 |
| HeikoS1 | well | 20:29 |
| HeikoS1 | then virtual-env | 20:30 |
| -!- iglesiasg [~iglesias@2001:6b0:1:1da0:c029:1ee2:bde3:1b86] has quit [Quit: Ex-Chat] | 20:30 | |
| shogun-buildbot | build #1826 of deb3 - modular_interfaces is complete: Failure [failed compile r_modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1826 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 20:36 |
| wiking | lambday: ^ same error on the buildbot | 20:38 |
| lambday | wiking: HeikoS1: I guess I should remove the computation framework related things from modular interface for the time being :( | 20:40 |
| HeikoS1 | lambday: nope | 20:40 |
| HeikoS1 | I need it ;) | 20:40 |
| lambday | HeikoS1: would you need the Scalar/Vector-results related stuffs too? | 20:41 |
| HeikoS1 | lambday: dont know, at least the serial computation engine, I dont know if things still work when the others are removed, but you can try | 20:41 |
| HeikoS1 | but pls do that locally first | 20:41 |
| lambday | HeikoS1: alright | 20:44 |
| lambday | HeikoS1: LOL I added a ridge... 10,000 (just for fun), and CG-M converges within <50 iterations :D | 20:45 |
| HeikoS1 | lambday: hehe :) | 20:45 |
| lambday | cond# for this one is ~100 | 20:45 |
| HeikoS1 | lambday: this makes it almost a diagonal matrix | 20:45 |
| HeikoS1 | so maybe play with that a big | 20:45 |
| lambday | yeah | 20:45 |
| HeikoS1 | lambday: what happened to the original matrix without AtA? | 20:45 |
| lambday | trying with various combo | 20:46 |
| lambday | HeikoS1: going to get tea (chai) :) | 20:46 |
| HeikoS1 | enjoy :) | 20:46 |
| HeikoS1 | I will leave here soon too | 20:46 |
| lambday | alright - I will try to do as much as possible but this stupid LAN ban thingi.. can't get any work done from 1:30AM to 5AM :'( | 20:47 |
| lisitsyn | hah yeah lambday that's ridiculous | 20:51 |
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| @HeikoS | lambday: ah man, weird ;) so gogogogog | 21:00 |
| shogun-buildbot | build #1479 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1479 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 21:01 |
| lambday | back | 21:11 |
| lambday | lisitsyn: HeikoS: tell me about it.. | 21:11 |
| lambday | weirdest thing I have ever heard/been through! | 21:12 |
| @HeikoS | lambday: I just got the log-det sampler running onthe cluster for the first time :) | 21:14 |
| lambday | HeikoS: yippie :D | 21:15 |
| besser82 | HeikoS: small fixup: https://github.com/shogun-toolbox/shogun/pull/1617 --> Can you merge, please? | 21:15 |
| lambday | HeikoS: which data you are using | 21:15 |
| @HeikoS | lambday: ozone | 21:16 |
| lambday | nice!! | 21:16 |
| shogun-notifier- | shogun: Bj?rn Esser :develop * 2c3c872 / src/shogun/mathematics/munkres.cpp,src/shogun/mathematics/munkres.h: https://github.com/shogun-toolbox/shogun/commit/2c3c872c5e264c547dec227d97ea93252a45237f | 21:16 |
| shogun-notifier- | shogun: fixed wrong license-disclaimer | 21:16 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 33c140f / src/shogun/mathematics/munkres.cpp,src/shogun/mathematics/munkres.h: https://github.com/shogun-toolbox/shogun/commit/33c140f53473841a79b0dea53efa87dfd27d4048 | 21:16 |
| shogun-notifier- | shogun: Merge pull request #1617 from besser82/fix_license | 21:16 |
| shogun-notifier- | shogun: | 21:16 |
| shogun-notifier- | shogun: fixed wrong license-disclaimer | 21:16 |
| @HeikoS | thanks besser82 | 21:16 |
| besser82 | HeikoS: np :) | 21:18 |
| lambday | HeikoS: added a ridge 100.0 to the original matrix, CG-M converges within 500 iterations | 21:19 |
| lambday | tested with 1000.0, 10000.0 too, CG-M converged < 50 iterations | 21:19 |
| @HeikoS | lambday: ok that is good, you can add a comment in the notebook that you are doing this in order to make runtime reasonable | 21:20 |
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| lambday | HeikoS: yeah that's what I was thinking | 21:20 |
| @HeikoS | lambday: ok, could you send me a little draft of the notebook tonight? | 21:21 |
| @HeikoS | lambday: I have to go now, but very curious to have a look | 21:21 |
| shogun-buildbot | build #1827 of deb3 - modular_interfaces is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1827 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 21:24 |
| shogun-buildbot | build #1713 of deb2 - static_interfaces is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/deb2%20-%20static_interfaces/builds/1713 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 21:25 |
| shogun-buildbot | build #1828 of deb3 - modular_interfaces is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1828 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 21:25 |
| lambday | HeikoS: currently adding/removing a lot of stuffs... will send by tomorrow? | 21:27 |
| @HeikoS | lambday: it doesnt have to be perfect, I am just interested how it looks like, so non-perfect state is ok | 21:27 |
| lambday | HeikoS: alright I'll send :) | 21:28 |
| shogun-buildbot | build #1745 of bsd1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1745 | 21:29 |
| @HeikoS | lambday: nice, ok see you later going home now | 21:31 |
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| shogun-buildbot | build #98 of FC19 - modular_interfaces is complete: Failure [failed git] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/98 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Bj?rn Esser <bjoern.esser@gmail.com> | 21:32 |
| besser82 | github is down :( | 21:35 |
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| @iglesiasg | hi hushell | 21:40 |
| @iglesiasg | hushell, how are you? I am checking the PR right now | 21:40 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11470047 | 21:43 |
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| wiking | shouldn't we start supporting this: http://www.openblas.net/? | 21:50 |
| @HeikoS | wiking: no we should stick with eigen3, which in fact calls blas internally quite often | 21:55 |
| @HeikoS | wiking: btw about the -g, eigen3 sometimes seems unreasonably slow, it might have to do with that, is it possible to add a strip option to cmake=? | 21:56 |
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| wiking | HeikoS: no you dont need cmake to strip the library | 21:57 |
| wiking | just exec strip libshogun.so... | 21:57 |
| @HeikoS | wiking: can I just do this on the installed one? | 21:57 |
| @HeikoS | I see | 21:57 |
| besser82 | HeikoS: yes, you can simply strip the installed one ;) | 21:57 |
| besser82 | wiking: but it would be nice if CMake would place the system's CFLAGS/LDFLAGS at the end of all used flags ;) | 21:58 |
| shogun-buildbot | build #1480 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1480 blamelist: Bj?rn Esser <bjoern.esser@gmail.com> | 21:59 |
| besser82 | HeikoS: strip -pg $installed_lib | 21:59 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11469522 | 22:01 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11472697 | 22:15 |
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| shogun-buildbot | build #1197 of rpm1 - libshogun is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1197 | 22:29 |
| shogun-buildbot | build #1481 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1481 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 22:36 |
| wiking | lisitsyn: here? | 22:37 |
| lisitsyn | wiking: ja | 22:37 |
| wiking | lisitsyn: what do you think about supplying a DO custom droplet for shogun? :) | 22:37 |
| lisitsyn | wiking: haha why? | 22:37 |
| wiking | lisitsyn: well maybe we could run there that ipython shit | 22:38 |
| lisitsyn | wiking: ahh well | 22:38 |
| lisitsyn | I don't mind | 22:38 |
| lisitsyn | :) | 22:38 |
| wiking | anyways soon i have the squashfs ready | 22:39 |
| wiking | it's like minutes | 22:39 |
| shogun-notifier- | shogun: Viktor Gal :develop * 1e7792f / cmake/FindARPACK.cmake: https://github.com/shogun-toolbox/shogun/commit/1e7792f38a19d1ba655a73cfabc6574588abf615 | 22:48 |
| shogun-notifier- | shogun: Prefer arpack over parpack | 22:48 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11473706 | 22:59 |
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| shogun-buildbot | build #99 of FC19 - modular_interfaces is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20modular_interfaces/builds/99 blamelist: Viktor Gal <viktor.gal@maeth.com> | 23:01 |
| shogun-buildbot | build #1714 of deb2 - static_interfaces is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/deb2%20-%20static_interfaces/builds/1714 | 23:02 |
| shogun-buildbot | build #1198 of rpm1 - libshogun is complete: Failure [failed compile] Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1198 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 23:05 |
| shogun-buildbot | build #1482 of cyg1 - libshogun is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1482 blamelist: Viktor Gal <viktor.gal@maeth.com> | 23:31 |
| @sonney2k | besser82, libarchive sounds great! | 23:36 |
| besser82 | sonney2k: then I'm glad to have you helped-out :) | 23:37 |
| lisitsyn | wiking: around? | 23:37 |
| besser82 | sonney2k: any idea why ctest doesn't respect PYTHONPATH? | 23:37 |
| wiking | lisitsyn: yes | 23:38 |
| lisitsyn | wiking: have you ever worked with detection of multiple parts? | 23:38 |
| wiking | y | 23:38 |
| besser82 | sonney2k,wiking: any idea why ctest doesn't respect PYTHONPATH? | 23:38 |
| lisitsyn | wiking: I know latent svm is the approach but I am out of time :( | 23:38 |
| wiking | http://maeth.com/shogun-image.fs.sfs | 23:38 |
| wiking | shogun prebuild squashfs | 23:38 |
| besser82 | wiking: any idea why ctest doesn't respect PYTHONPATH? | 23:39 |
| lisitsyn | wiking: what have you used to learn the model, etc? | 23:39 |
| wiking | lisitsyn: how many parts? | 23:40 |
| wiking | lisitsyn: do u have the parts annotated? | 23:40 |
| lisitsyn | wiking: 1+1 optional | 23:40 |
| wiking | besser82: dunno | 23:40 |
| besser82 | wiking: kk | 23:40 |
| lisitsyn | wiking: basically whether a payloader carries something | 23:40 |
| wiking | lisitsyn: do u have annotation? | 23:40 |
| lisitsyn | wiking: yeah I annotated a bit | 23:40 |
| wiking | ok | 23:40 |
| wiking | 1+1 optional is really not much | 23:41 |
| wiking | i mean 1 part is like no part | 23:41 |
| lisitsyn | yeah totally simple | 23:41 |
| lisitsyn | yes | 23:41 |
| wiking | try the partbaseddetector | 23:41 |
| wiking | do u have a matlab around? | 23:41 |
| lisitsyn | nope | 23:41 |
| wiking | lisitsyn: https://github.com/wg-perception/PartsBasedDetector | 23:42 |
| wiking | but the training part is matlab | 23:42 |
| lisitsyn | wiking: ok thanks | 23:42 |
| wiking | where should we put a link for this squashfs | 23:43 |
| wiking | ? | 23:45 |
| lisitsyn | no clue :) | 23:45 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11474063 | 23:51 |
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| --- Log closed Wed Sep 18 00:00:04 2013 | ||
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