IRC logs of #shogun for Monday, 2013-10-07

--- Log opened Mon Oct 07 00:00:30 2013
shogun-buildbotbuild #73 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/73  blamelist: hushell <dom343@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>00:22
shogun-notifier-shogun-web: Soeren Sonnenburg :master * 4f4cb65 / pages/views.py,templates/home.html,templates/news.html,templates/subpage.html: https://github.com/shogun-toolbox/shogun-web/commit/4f4cb6507cd48c3360d2bf2765a82a2704c4f2cb00:25
shogun-notifier-shogun-web: fix some validator errors and sort the notebook list00:25
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shogun-buildbotbuild #75 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/75  blamelist: hushell <dom343@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>00:36
shogun-buildbotbuild #93 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/93  blamelist: hushell <dom343@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>01:19
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shogun-notifier-shogun: Soeren Sonnenburg :develop * b1cb617 / src/shogun/base/DynArray.h,src/shogun/kernel/Kernel.cpp: https://github.com/shogun-toolbox/shogun/commit/b1cb61776b3e346e564070c989fc10597512317608:45
shogun-notifier-shogun: fix 2 static analyssis warnings08:45
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shogun-buildbotbuild #1318 of rpm1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1318  blamelist: Soeren Sonnenburg <sonne@debian.org>09:32
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1221834509:49
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shogun-buildbotbuild #74 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/74  blamelist: Soeren Sonnenburg <sonne@debian.org>10:12
shogun-buildbotbuild #76 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/76  blamelist: Soeren Sonnenburg <sonne@debian.org>10:26
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shogun-buildbotbuild #94 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/94  blamelist: Soeren Sonnenburg <sonne@debian.org>11:09
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gep82hello :) anyone to spare some of his time with a liitle installation problem of mine?:)13:47
lisitsyngep82: yes13:50
gep82thank you i ll try to be brief13:50
gep82i m on ubuntu13.04 trying to install shogun 3.. After succesfully (?) configuring for build-release with cmake for matlab,cmd,python (static+modular) , i did make + make install13:52
gep82but cant find any built files13:53
lisitsynwhere do you search for them?13:53
gep82eg for matlab shouldnt be a sg.mex file somewhere?13:54
gep82build-release/src/interfaces ?13:55
gep82sorry for being a noob but except build-release/examples/undocumented/libshogun cant find anything else to run14:03
gep82i did it multiple times -cmake is not complaining about anything missing14:08
lisitsyngep82: sorry was afk14:15
lisitsyngep82: what's in your build folder?14:15
lisitsyneverything should be there IIRC14:15
gep82i have cmakefiles, examples, src, tests folders and some libs installed with -DBUNDLE option14:18
gep82however opening src/interfaces/matlab_static there is no sgmex14:20
lisitsyngep82: well try find *.mex14:20
lisitsynno they are going to be in build folder14:20
lisitsynnot src14:20
gep82nope:)14:21
gep82in my defence, i managed to configure/install shogun2.1 successfully:):)14:24
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gep82thank you for your time.. i ll try building again (and again):)14:39
lisitsyngep82: sorry a bit busy right now14:40
lisitsyniglesiasg: could you help gep82?14:40
@iglesiasglisitsyn, let me check logs14:40
@iglesiasggep82, so there is no .mex file after building Shogun for Matlab static?14:42
gep82yeap14:43
@iglesiasggep82, what flags did you set in cmake?14:44
gep82sudo cmake -DBUNDLE_EIGEN=ON -DBUNDLE_JSON=ON -DBUNDLE_ARPREC=ON -DBUNDLE_LPSOLVE=ON -DPythonModular=ON -DPythonStatic=ON -DCmdLineStatic=ON -DMatlabStatic=ON -DMATLAB_ROOT=/usr/local/MATLAB/R2013a -DCMAKE_BUILD_TYPE=Release -DENABLE_TESTING=ON -DCMAKE_INSTALL_PREFIX="$BUILDDIR/install" ..14:45
@iglesiasggep82, out of curiosity, why cmake with sudo?14:48
@iglesiasggep82, 4 interfaces and Release mode, that will take a long while I am afraid. I'd suggest getting to work first one of them, since you might need to recompile before we find why the executable is not found14:49
@iglesiasggep82, where are you executing that? I guess in a build directory inside your Shogun directory14:49
@iglesiasggep82, also, where is BUILDDIR pointing to?14:50
gep82yeah i got enthusiastic due to my previous success with shogun214:50
gep82yes inside the shogun directory: shogun-develop/build-release14:51
@iglesiasggep82,  all right, what about sudo with cmake?14:51
@iglesiasgnot sure if that might affect the output directories14:52
@iglesiasgwhere the libraries are placed I mean14:52
gep82ah sorry many msgs:) out of habit i can do it without sudoing14:52
@iglesiasggep82, yeah, try it like that14:54
@iglesiasggep82, but start with a fresh new build directory14:54
gep82ok thank you very much14:54
@iglesiasgi.e. rm -rf build-release14:54
@iglesiasgno problem, you are welcome :)14:54
@iglesiasggep82, also, what about this -DCMAKE_INSTALL_PREFIX="$BUILDDIR/install"??14:55
@iglesiasgwhat is BUILDDIR in your env?14:56
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thoralfHeylo.14:57
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sonne|osxwiking: how often do we update the static analysis bugs?17:37
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shogun-buildbotbuild #236 of osx1 - libshogun is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/236  blamelist: Soeren Sonnenburg <sonne@debian.org>17:58
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KMcQuistenHello all.  How are things?19:14
KMcQuisten*knockknock*  Anyone home?19:18
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@sonney2kwiking!20:33
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shogun-notifier-shogun: Soeren Sonnenburg :develop * b000726 / src/shogun/ (4 files): https://github.com/shogun-toolbox/shogun/commit/b000726f1e00c09a382526089a53b37441e0e33420:53
shogun-notifier-shogun: fix further mistakes detected by static analyzer20:53
shogun-buildbotbuild #2337 of deb1 - libshogun is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2337  blamelist: Soeren Sonnenburg <sonne@debian.org>20:56
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@sonney2kbesser82|laptop, hey good evening!21:11
@sonney2kbesser82|laptop, any news from the cmake front?21:12
besser82|laptopsonney2k: there should be some stable result araound tomorrow ~13:00 UTC  ;)21:12
besser82|laptopsonney2k: good eve back to you, btw.  :)21:13
@sonney2kbesser82|laptop, hehe21:15
@sonney2kbesser82|laptop, I am fighting with the website css js crazyness21:15
@sonney2kbesser82|laptop, for some reason when I use chrome and click on any of the notebooks http://shogun-toolbox.org/page/notebook/21:16
@sonney2kthen I get crazy formulas21:16
@sonney2kbut it works locally - wtf!?21:16
@sonney2kMy only guess is that stuff is loaded in parallel on shogun-toolbox.org but not locally21:17
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1224413021:17
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shogun-notifier-shogun: Soeren Sonnenburg :develop * 3e331bc / src/shogun/features/SNPFeatures.cpp: https://github.com/shogun-toolbox/shogun/commit/3e331bc3a7c152575f6458bdd06e7a16497188be21:19
shogun-notifier-shogun: fix copy & paste error21:19
besser82|laptopsonney2k: for me with ff it looks good...21:21
besser82|laptopsonney2k: I don't use Chrome :(21:21
@sonney2kbesser82|laptop, when you click on an image what happens?21:21
@sonney2kdo you get an overlay?21:21
@sonney2kor new page?21:22
besser82|laptopsonney2k: too much FOSS  ;)21:22
besser82|laptopsonney2k: sry,  it a new page then21:22
@sonney2khmmhh21:22
shogun-buildbotbuild #2338 of deb1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/233821:22
@sonney2kok that would work with chrome too21:22
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shogun-buildbotbuild #237 of osx1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/23721:31
shogun-buildbotbuild #1319 of rpm1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/131921:39
shogun-notifier-shogun-web: Soeren Sonnenburg :master * 007ae06 / static/css/style.css,static/js/overlay.js: https://github.com/shogun-toolbox/shogun-web/commit/007ae0677726c2c3e1a795c5248b49897e424c8f21:57
shogun-notifier-shogun-web: fix js / css errors21:57
@sonney2kbesser82|laptop, please try again with FF on http://shogun-toolbox.org/page/notebook/21:59
@sonney2kbesser82|laptop, do you get an overlay now?21:59
besser82|laptopsonney2k: yes, but topmenu varnishes when overlay openes...22:00
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@sonney2kbesser82, yeah well so much about my 1331 webdesign skills22:02
@sonney2kbesser82, but formulas look OK or broken?22:02
besser82sonney2k: formular look OK to me here22:02
@sonney2khmmhh22:03
@sonney2ktotally broken in chrome22:03
@sonney2kand of course working fine locally22:04
@sonney2ksame issue in safari22:08
shogun-buildbotbuild #75 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/75  blamelist: Soeren Sonnenburg <sonne@debian.org>22:08
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besser82sonney2k: seems to be webkit related, then...22:18
shogun-notifier-shogun: hushell :develop * f225dad / doc/ipython-notebooks/structure/FGM.ipynb: https://github.com/shogun-toolbox/shogun/commit/f225dadd1f2fa10d20cacc68835154c43afe92a122:19
shogun-notifier-shogun: update ipython notebook for structured output learning22:19
shogun-notifier-shogun: Soeren Sonnenburg :develop * 4d57d48 / doc/ipython-notebooks/structure/FGM.ipynb: https://github.com/shogun-toolbox/shogun/commit/4d57d48d7a15f77b4d022a844d3b3a02fe98a98422:19
shogun-notifier-shogun: Merge pull request #1710 from hushell/develop22:19
shogun-notifier-shogun:22:19
shogun-notifier-shogun: update ipython notebook for structured output learning22:19
@sonney2kbesser82, well locally it works!22:20
besser82sonney2k: i think, i have no constructive advise for you then  :(22:21
besser82sonney2k: btw. i'm going to bed now. cu tomorrow, then. I hope you'll find the problem with that css/js.  :)22:22
@sonney2kbesser82, yeah let me suffer alone22:22
@sonney2kbesser82, have a nice sleep!22:22
shogun-buildbotbuild #77 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/77  blamelist: Soeren Sonnenburg <sonne@debian.org>22:23
besser82sonney2k: thanks.  btw. have tried to embed some usably freefont in css and use that for examples?22:23
besser82sonney2k: s/examples/formular/22:24
besser82sonney2k: If you don't find the problem, I'll try to find some useful info in my css bible tomorrow....22:25
@sonney2kbesser82, well I figured that setting mathjax output to svg fixes the issue22:26
@sonney2kbesser82, formular?22:26
@sonney2know I have to figure out how to configure mathjax to use svg22:27
@sonney2kahh22:27
@sonney2ksetting it back to html / css works too22:27
@sonney2kjsut not on first load22:27
besser82sonney2k: so now it works?!?22:29
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1224513122:45
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shogun-notifier-shogun-web: Soeren Sonnenburg :master * 3575938 / static/js/overlay.js,templates/page.html: https://github.com/shogun-toolbox/shogun-web/commit/35759386313f8c39c8b2de9a913ffe88d15d141922:45
shogun-notifier-shogun-web: use svg for mathjax per default and add esc key support for closing the22:45
shogun-notifier-shogun-web: overlay22:45
@sonney2kbesser82, nope maximum screwup now22:47
@sonney2kformulas gone completely22:47
@sonney2kwith whitespace to no avail22:47
shogun-buildbotbuild #84 of debian wheezy - memcheck is complete: Failure [failed memory check]  Build details are at http://buildbot.shogun-toolbox.org/builders/debian%20wheezy%20-%20memcheck/builds/84  blamelist: Soeren Sonnenburg <sonne@debian.org>22:51
@sonney2kyay infinity in jax.js22:53
@sonney2kI guess I should rather use and older mathjax version22:53
* sonney2k checks22:53
shogun-notifier-shogun-web: Soeren Sonnenburg :master * 25b8c52 / templates/page.html: https://github.com/shogun-toolbox/shogun-web/commit/25b8c52c40f25685938db4077babc7a15d194dac23:00
shogun-notifier-shogun-web: try mathjax 2.123:00
@sonney2kscrew it23:03
shogun-buildbotbuild #95 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/95  blamelist: Soeren Sonnenburg <sonne@debian.org>23:06
shogun-buildbotbuild #76 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/76  blamelist: Soeren Sonnenburg <sonne@debian.org>, hushell <dom343@gmail.com>23:38
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1224730123:42
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shogun-buildbotbuild #78 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/78  blamelist: Soeren Sonnenburg <sonne@debian.org>, hushell <dom343@gmail.com>23:52
--- Log closed Tue Oct 08 00:00:32 2013

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