IRC logs of #shogun for Sunday, 2014-02-02

« Saturday, 2014-02-01 Index Monday, 2014-02-03 »
--- Log opened Sun Feb 02 00:00:20 2014
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@HeikoSwiking: hi!01:24
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lisitsyn1wiking: I got tired to write 'something.begin(), something.end()', here is an attempt to resolve that https://github.com/lisitsyn/algorithme08:30
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shogun-notifier-shogun: Soeren Sonnenburg :develop * f218255 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/f218255ae62dd3a69c38304fab47689247646c0209:37
shogun-notifier-shogun: drop libstdc++ workaround from cmake lists09:37
shogun-notifier-shogun:09:37
shogun-notifier-shogun: for osx we need swig 3.0.0 (currently git clone only) for a modular09:37
shogun-notifier-shogun: interface to work09:37
shogun-buildbotbuild #2629 of deb1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2629  blamelist: Soeren Sonnenburg <sonne@debian.org>09:44
shogun-notifier-shogun: Soeren Sonnenburg :develop * c00e58f / tests/unit/lib/SGVector_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/c00e58fd1a0624a4a25f1002b7fb6045175a9a7110:09
shogun-notifier-shogun: use expect_near macros when comparing results10:09
shogun-buildbotbuild #2630 of deb1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/263010:15
shogun-notifier-shogun: Soeren Sonnenburg :develop * 35485c8 / tests/unit/lib/SGVector_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/35485c8dffe64a8994094ea0a4f6beccf8b0ba4910:20
shogun-notifier-shogun: seed rng to get reproducible tests10:20
shogun-buildbotbuild #454 of FC19 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20libshogun/builds/454  blamelist: Soeren Sonnenburg <sonne@debian.org>10:27
shogun-buildbotbuild #445 of FCRH - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/FCRH%20-%20libshogun/builds/445  blamelist: Soeren Sonnenburg <sonne@debian.org>10:27
shogun-buildbotbuild #358 of osx1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/358  blamelist: Soeren Sonnenburg <sonne@debian.org>10:30
shogun-buildbotbuild #1516 of rpm1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1516  blamelist: Soeren Sonnenburg <sonne@debian.org>10:30
lisitsyn1wiking: haha a lot of misses10:35
@wikinglisitsyn1: lot?10:36
@wikinglisitsyn1: only 4 till now :D10:36
lisitsyn1wiking: 5 now10:36
@wikingi was expecting much more10:36
lisitsyn1;)10:36
@wiking:)))10:36
@wikinglike 20+10:36
@wikingbut this was expected10:36
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shogun-buildbotbuild #50 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/50  blamelist: Soeren Sonnenburg <sonne@debian.org>10:37
@wikinglisitsyn1: thnx for signing10:37
lambdaywiking: license changing?10:37
@wikinglambday: yes10:37
@wikinglambday: wanna talk about it or just sign it? :D10:38
@wikingsonney2k: that patch is breaking unfortunately the whole modular compilation atm10:39
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lambday_:D10:40
@wikinglambday: u used 3 different accounts for committing to shogun? :D10:41
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shogun-buildbotbuild #2075 of bsd1 - libshogun is complete: Failure [failed compile test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/2075  blamelist: Soeren Sonnenburg <sonne@debian.org>10:43
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shogun-buildbotbuild #413 of precise - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/413  blamelist: Soeren Sonnenburg <sonne@debian.org>10:48
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lambdaywiking: no only one account :-/10:53
@wikingah ok10:54
lambdaybrb after lunch..10:54
@wikingheheh 8 signed, 5 missed recepient out of 100 emails10:54
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1806782611:03
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shogun-buildbotbuild #26 of osx2 - python is complete: Failure [failed python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/2611:17
shogun-buildbotbuild #2076 of bsd1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/207611:22
shogun-buildbotbuild #455 of FC19 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/FC19%20-%20libshogun/builds/45511:26
shogun-buildbotbuild #446 of FCRH - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/FCRH%20-%20libshogun/builds/44611:26
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1806797811:31
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shogun-buildbotbuild #1517 of rpm1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/151711:31
shogun-buildbotbuild #359 of osx1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/35911:31
shogun-buildbotbuild #51 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/51  blamelist: Soeren Sonnenburg <sonne@debian.org>11:32
shogun-buildbotbuild #360 of osx1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/360  blamelist: Soeren Sonnenburg <sonne@debian.org>11:40
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@wikinglisitsyn1: the only thing we'll still have to do is to check all the included libraries  :D11:43
@wikinglisitsyn1: like libqp is gplv311:43
lisitsyn1wiking: ha11:43
@wikingso either we somehow fork that out or i have no idea11:43
@wiking:)))11:43
@wikingand as well u've imported some code11:43
@wikingthat u have the agreement for gplv311:43
lisitsyn1oh shit11:43
lisitsyn1yeah11:44
lisitsyn1slep and malsar11:44
@wikingyes11:44
@wikingthose needs to be checked by the author11:44
lisitsyn1well actually11:44
lisitsyn1I am the author of code11:44
@wikingand i guess we'll have to prepare ourselves for the situation where somebody is going to disagree11:44
lisitsyn1it is just ported from matlab one11:44
@wiking:)11:44
lisitsyn1I don't know how this works with ports11:44
@wikingmmm yeah we'll have to figure out11:44
lisitsyn1ahhh no there is a bunch of imported code as well11:45
@wikingi'll try to get some expert's opinion11:45
@wikingabout this11:45
@wikinganyhow11:45
@wikingmaaaybe11:45
@wikingwhat we will have on the end11:45
@wikinglike gstreamer11:45
@wikingonce we have the modular stuff11:45
lisitsyn1I personally don't mind to lose anything11:45
@wikingwe just 'dump' the stuff that cannot be bsd licensed11:45
@wikinginto one package11:45
@wikingthat is going to be gpl marked11:45
@wikingand problem solved11:45
lisitsyn1yeah11:46
@wikingwe use that via api11:46
@wikingand voila11:46
@wikingthen i think we are not breaking licensing11:46
@wikingand if somebody needs that module licensed under bsd11:46
@wikingwell then he/she can do the porting11:46
@wikinganyhow this should be just after11:47
shogun-buildbotbuild #414 of precise - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/41411:47
@wikingwhen we cleared up everything11:47
@wikingwith the individual contributors11:47
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@wikingwe need to finalize the idea list for gsoc 201411:48
@wikinglisitsyn1: if u have some time could u add more 'blablabla' to 'Implement an easy to use modelselection API11:49
@wikingplz11:49
lisitsyn1wiking: yeah sure11:49
@wikinglisitsyn1: is this 3 liner bsd? http://www.csie.ntu.edu.tw/~cjlin/libsvm/COPYRIGHT11:49
lisitsyn1wiking: I just put some draft here11:49
lisitsyn1wiking: yeah11:49
@wikinglisitsyn1: yeah no worries just that we soon have to publish it11:50
lisitsyn1wiking: I wanted to add another one11:50
@wikingok so with libsvm we are good i guess11:50
@wikinglisitsyn1: go ahead11:50
lisitsyn1on some matrix factorization11:50
lisitsyn1wiking: liblinear libsvm are ok11:50
@wikinghehehe11:50
@wikingals?11:50
lisitsyn1wiking: remember iphone11:50
@wikingor svd? :)11:50
@wikingah yeah11:50
@wikingiphone true11:50
lisitsyn1wiking: yeah ksvd may be11:50
@wikingah yeah cool11:51
lisitsyn1wiking: feature learning for the win11:51
lisitsyn1:D11:51
lisitsyn1I hate to engineer features11:51
lisitsyn1wanna put it raw and get stuff back11:51
@wikinglisitsyn1: yeah would be cool to actually have some feature selection stuff as well11:51
@wikingthe most stupidest way would be random forest11:52
lisitsyn1wiking: it is a shame we still don't have it11:53
@wikingheheh tell me about it11:53
@wikingwell as soon as we have a decision tree implementation11:53
lisitsyn1wiking: we should have at least what opencv has11:53
@wikingit's really just a 3 liner to have random forest11:53
@wikingbasically one just needs to put that decision tree into baggingMachine11:54
@wikingand booom11:54
@wiking:)11:54
@wikinghere we can use this11:55
@wikinghttps://github.com/zuqqhi2/RandomForest/blob/master/lib/randomforest.js11:55
@wiking:DDDD11:55
lisitsyn1wiking: ahh yeah we can employ your begging machine11:56
@wikingfucking protobuf12:00
@wikinglol http://about.wise.io/12:07
* wiking is getting tired of bootstrap sites :)12:15
lisitsyn1wiking: hah yeah it is what sucks now12:19
lisitsyn1before it was like about absolutely ugly websites12:19
lisitsyn1but now it is all around bootstrap12:20
lisitsyn1not that ugly but you can't enter any market with it I believe12:20
@wikingwell everybody's bootstrapping now :D12:21
@wikingthnx to twitter :)12:21
shogun-notifier-shogun: Soeren Sonnenburg :develop * 9058910 / src/interfaces/modular/modshogun_ignores.i: https://github.com/shogun-toolbox/shogun/commit/9058910c5d892921d72f3910ebd2ad99ccde800612:23
shogun-notifier-shogun: fix compile error occurring with swig312:23
@wikingmmm12:25
shogun-notifier-shogun: Viktor Gal :develop * 7822cc2 / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/7822cc2154924da366f8f08ee4e4508172ebfd9412:31
shogun-notifier-shogun: Fix libc++ and libstdc++ mixup on OSX with swig 2.0.11 or earlier12:31
@wikingsonney2k: this should actually do u some good with swig 3.0.012:31
@wikingit'll try to compile it with libc++12:31
@wikingthat should be fine with swig 3.0.012:31
@wikingas well as make it working with swig 2.0.1112:32
@wikingas mixing libc++ compiled libshogun with libstdc++ compiled modular interface is just a big failure :<12:32
shogun-buildbotbuild #361 of osx1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx1%20-%20libshogun/builds/36112:34
@wikingsonney2k: this is buggy though:12:37
@wiking-- Looking for C++ include unordered_map12:37
@wiking-- Looking for C++ include unordered_map - not found12:37
@wikingah ok it's a differnt machine12:38
shogun-buildbotbuild #52 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/52  blamelist: Soeren Sonnenburg <sonne@debian.org>12:43
@sonney2kwiking, due to the incompat of python2 & 3 I would go with besser82's suggestion and just create another directory with the python3 data12:53
@wikingsonney2k: fine by me12:55
@wikingsonney2k: i was only bitching the way the whole libc++ got handled12:55
@wikingthat solution basically broke every modular interface under osx12:55
@wikingsonney2k: next osx python build should be interested as that will enable c++11 with libc++ for swig as i see that u've installed swig HEAD on that osx machien12:56
@wiking*machine12:56
@wikingbtw i told u guys that fixing python3 will be a big bitch... i knew this back in 2013 summer when i was doing the whole cmake port....12:57
shogun-notifier-shogun: Soeren Sonnenburg :develop * 4e8e58a / examples/undocumented/libshogun/base_migration_type_conversion.cpp: https://github.com/shogun-toolbox/shogun/commit/4e8e58abe52aeae8d7b77a74ae7c5bab71152cf512:58
shogun-notifier-shogun: mute warning about serialization version12:58
@sonney2kwiking, python3 works already it just that data pickled with python2 won't load with python3 that is all13:00
@sonney2kwiking, did compile!13:02
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1807154613:10
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shogun-buildbotbuild #27 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/27  blamelist: Soeren Sonnenburg <sonne@debian.org>13:17
shogun-notifier-shogun-data: Soeren Sonnenburg :master * a1dabec / testsuite/ (784 files): https://github.com/shogun-toolbox/shogun-data/commit/a1dabeccb50bd250c0c10745ce6026f608bb06f513:27
shogun-notifier-shogun-data: make canned data tests python version specific13:27
shogun-notifier-shogun: Soeren Sonnenburg :develop * 6436213 / data,tests/integration/python_modular/generator.py: https://github.com/shogun-toolbox/shogun/commit/6436213a2fd3fcf0ef6810c3abe1ad48dcdedeec13:27
shogun-notifier-shogun: make canned data tests python version specific13:27
shogun-buildbotbuild #53 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/53  blamelist: Soeren Sonnenburg <sonne@debian.org>, Viktor Gal <viktor.gal@maeth.com>13:35
@wikingsonney2k: ok perfect now we have proper libc++ with swig 3.0.013:43
@wikingi only wonder why some of these tests fails now13:43
@wiking159 - integration-python_modular-tester-distance_jensen_modular (Failed) 203 - integration-python_modular-tester-features_string_file_modular (Failed) 211 - integration-python_modular-tester-kernel_chi2_modular (Failed) 244 - integration-python_modular-tester-kernel_power_modular (Failed) 262 - integration-python_modular-tester-library_fisher2x3_modular (Failed)13:44
@wiking 279 - intgration-python_modular-testere-preprocessor_normone_modular (Failed) 281 - integration-python_modular-tester-preprocessor_prunevarsubmean_modular (Failed) 282 - integration-python_modular-tester-preprocessor_randomfouriergausspreproc_modular (Failed) 285 - integration-python_modular-tester-regression_gaussian_process_modular (Failed) 675 - python_modular-features_string_file_modular (Failed)13:44
@wikingin the error msg the DIFF is 0 long :)13:44
@wikingsonney2k: yeah i knew that already :<13:45
@wikingi mean that that's going to be the problem13:45
@wikingwell we can just generate the pickled data in py313:45
@wikingand we should be good13:46
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travis-ci[travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1807183113:46
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@wikingsonney2k: if u have some time could u add some additional info to the tasks you've proposed in the gsoc 2014 document?13:46
@wikingwonders what's with gcc now13:49
@wikingah ok SGVector.dot has bigger error than 1e-1013:49
@wikingit's only 1e-8 prcise13:50
@wiking*precise13:50
@wikingsorry 1e-913:51
shogun-notifier-shogun: Viktor Gal :develop * 59d4a4a / tests/unit/lib/SGVector_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/59d4a4a93ee7f0cbb81dfff17cd87316d7c2ef0613:55
shogun-notifier-shogun: Lower precision for SGVectorTest.dot13:55
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shogun-buildbotbuild #54 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/54  blamelist: Soeren Sonnenburg <sonne@debian.org>, Viktor Gal <viktor.gal@maeth.com>14:22
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shogun-buildbotbuild #28 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/28  blamelist: Viktor Gal <viktor.gal@maeth.com>14:28
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thoralfJo. Hey.14:28
lisitsyn1thoralf: hey thoralf ;)14:32
@wikingyo14:32
thoralfDid I woke you up? ;)14:32
@wikingyes14:32
thoralfEverything fine with the license change?14:33
* thoralf just signed the form.14:33
@wikinghave u signed it? :)14:33
@wikingok well we have like 80 to go :)14:33
thoralflol14:33
@wikingbut your's is in14:33
* thoralf saw the mail-delivery-notices on shogun-team.14:33
@wikingso it's all good thnx14:33
@wikingthoralf: ehhehe well yeah some people are in different places :)14:34
@wikingbut my favourite committers are like14:34
thoralfBut this 80 might contain duplicates, right?14:34
@wikingroot@<something>14:34
@wiking:)14:34
@wikingthoralf: indeed14:35
thoralflol14:35
* thoralf loves developing as root.14:35
@wikingalthough we are still missing signatures from sonney2k  and gunnar :) so that's going to be fun if they dont sign :>14:36
thoralfWho is this sonney2k anyway? ;)14:36
@wikinghehe14:37
* thoralf suggests a poll: At which age did you stop using root as your primary account?14:37
thoralf12? 13? ;)14:37
thoralflisitsyn1?14:37
lisitsyn1thoralf: haha14:38
lisitsyn1thoralf: I can't remember I ever used root actually14:38
thoralfIf it's bigger than 16 then you'll probably become sysadmin. ;)14:38
@wikingsonney2k: there's something still wrong with the new swig generated interface... some tests are timeouting for some reason14:39
lisitsyn1thanks %deity I am not a sysadmin :D14:39
@wikingif it's a swig related problem then we might want to figure it out fast as they are preparing the 3.0.0 release14:39
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1807325814:55
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shogun-buildbotbuild #29 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/29  blamelist: Soeren Sonnenburg <sonne@debian.org>14:59
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travis-ci[travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1807398715:27
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shogun-buildbotbuild #30 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/30  blamelist: Soeren Sonnenburg <sonne@debian.org>16:08
@wikingsonney2k: ping16:18
@wikingsonney2k: there are 2 python processes on fatbot that are running on 100% cpu since forever16:18
shogun-notifier-shogun: Soeren Sonnenburg :develop * c7df3b8 / / (3 files): https://github.com/shogun-toolbox/shogun/commit/c7df3b8195fcf978c1a9608f5eceb16adcdd679a16:35
shogun-notifier-shogun: fix generator for python3 and add python3 integration test data16:35
@wikingsonney2k: Unable to checkout '5abc41088015f9174f93dc951a0ba96c7c5c0c9c' in submodule path 'data'16:39
shogun-buildbotbuild #2635 of deb1 - libshogun is complete: Failure [failed git]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2635  blamelist: Soeren Sonnenburg <sonne@debian.org>16:39
@wikingok in the meanwhile i'll initiate a reboot on fatboot16:40
@wiking*fatbot16:40
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1807974216:42
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shogun-notifier-shogun-data: Soeren Sonnenburg :master * 5abc410 / testsuite/python3-tests/ (311 files): https://github.com/shogun-toolbox/shogun-data/commit/5abc41088015f9174f93dc951a0ba96c7c5c0c9c16:45
shogun-notifier-shogun-data: add python3 pickled results16:45
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shogun-buildbotbuild #31 of osx2 - python is complete: Failure [failed test libshogun test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/31  blamelist: Viktor Gal <viktor.gal@maeth.com>16:50
@wikingshogun-buildbot: force build --branch=develop 'deb1 - libshogun'16:51
shogun-buildbotbuild forced [ETA 2m40s]16:51
shogun-buildbotI'll give a shout when the build finishes16:51
shogun-buildbotbuild #2636 of deb1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/263616:53
@HeikoSHi all17:00
@HeikoSsonney2k, wiking, lisitsyn just recruited another mentor for GP/variational inference stuff. Pretty excited about that project17:00
@wikingHeikoS: yo17:01
@HeikoSwiking: yo!17:01
@wikingHeikoS: cool we need a more detailed description17:01
@wikingfor your projects17:01
@HeikoSwiking: working on it17:01
@wikingor for the proejects that you've proposed but another menter17:01
@HeikoShad icml deadline last friday :)17:01
@wikingokok17:01
@HeikoSyeah yeah will do17:01
@wikingi'm just saying17:01
@HeikoSI think I will do two17:02
@wikingi.e. 'friendly reminder'17:02
@HeikoSwiking: yeah, totally appreciated :)17:02
@HeikoSSoon to come ...17:02
@HeikoSok I will get some food, see you later17:02
@wikinglaterz17:02
@wikingshogun-buildbot: force build --branch=develop 'deb4 - python3'17:03
shogun-buildbotbuild #55 forced17:03
shogun-buildbotI'll give a shout when the build finishes17:03
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shogun-buildbotbuild #55 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/5517:09
@wikingsonney2k: almost... only 7 are failing17:10
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@sonney2kwiking, can you do anything about debian wheezy - memcheck ? I mean make it fail!18:14
@sonney2kwiking, the integration tests for mathematics_linsolver_cg fails also with python2 I guess that is why we don't have it18:16
@wikingsonney2k: yeah today i was trying to find in ctest manual why it's not returning -1 if it detect a memleak but no luck till now18:21
@wiking*detects18:22
@sonney2kwiking, all the python3 tests fail due to scipy not being able to read files / mat files or they are not on python218:22
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@sonney2kwiking, and if you use some fail pattern like besser82 used for the integration tests?19:10
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shogun-notifier-shogun-data: Soeren Sonnenburg :master * 98064f2 / logdet/west0479.mtx,logdet/west0479.mtx.gz: https://github.com/shogun-toolbox/shogun-data/commit/98064f241e8c92d9fcd82afe2174dc57ff28968920:01
shogun-notifier-shogun-data: use uncompressed data set due to a bug in python3.220:01
shogun-notifier-shogun-data: Soeren Sonnenburg :master * d998c32 / testsuite/python3-tests/ (3 files): https://github.com/shogun-toolbox/shogun-data/commit/d998c32292473a65f3f251e09247bde92dcfa24220:01
shogun-notifier-shogun-data: update py3 data20:01
@wikingshogun-buildbot: force build --branch=develop 'deb4 - python3'20:18
shogun-buildbotbuild #56 forced20:18
shogun-buildbotI'll give a shout when the build finishes20:18
shogun-buildbotbuild #56 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/5620:23
shogun-notifier-shogun-data: Soeren Sonnenburg :master * 4788158 / testsuite/python3-tests/ (2 files): https://github.com/shogun-toolbox/shogun-data/commit/4788158ef84957a70b434688a69a27585404835120:48
shogun-notifier-shogun-data: fix python3 tests20:48
shogun-notifier-shogun: Soeren Sonnenburg :develop * d354e86 / / (8 files): https://github.com/shogun-toolbox/shogun/commit/d354e86d4d2b672d00658e8c86a7c75cf1029d4720:53
shogun-notifier-shogun: Fix python3 tests20:53
shogun-notifier-shogun:20:53
shogun-notifier-shogun: - use uncompressed data in mathematics* to workaround an error in python3.220:53
shogun-notifier-shogun: - do not test dynprog on python 3 (it requires pickled numpy data...)20:53
shogun-notifier-shogun: - histogram kernel creates huge values when using order > 1 that are20:53
@sonney2kshogun-buildbot: force build --branch=develop 'deb4 - python3'20:54
shogun-buildbotbuild #57 forced20:54
shogun-buildbotI'll give a shout when the build finishes20:54
@sonney2kwiking, we really need this valgrind tests to work - the one libshogun example failing on osx from time to time is just a valgrind error in that example20:56
shogun-buildbotbuild #57 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/5720:58
shogun-notifier-shogun-data: Soeren Sonnenburg :master * a2891f2 / testsuite/python3-tests/mathematics_logdet0.txt: https://github.com/shogun-toolbox/shogun-data/commit/a2891f2249f95f8346c046ac0a58decae408d5dc21:01
shogun-notifier-shogun-data: drop failing logdet test21:02
shogun-notifier-shogun: Soeren Sonnenburg :develop * dcc66df / data: https://github.com/shogun-toolbox/shogun/commit/dcc66df22ffa6e196257730677697bec77869f3c21:02
shogun-notifier-shogun: require new data version21:02
@sonney2kshogun-buildbot: force build --branch=develop 'deb4 - python3'21:02
shogun-buildbotThe build has been queued, I'll give a shout when it starts21:02
shogun-buildbotbuild #58 of deb4 - python3 is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/58  blamelist: Soeren Sonnenburg <sonne@debian.org>21:10
shogun-buildbotbuild #2161 of deb3 - modular_interfaces is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/2161  blamelist: Soeren Sonnenburg <sonne@debian.org>21:41
shogun-buildbotbuild #59 forced21:42
shogun-buildbotI'll give a shout when the build finishes21:42
shogun-buildbotbuild #59 of deb4 - python3 is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb4%20-%20python3/builds/5921:47
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1809096921:48
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shogun-buildbotbuild #32 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/32  blamelist: Soeren Sonnenburg <sonne@debian.org>21:56
shogun-notifier-shogun-data: Soeren Sonnenburg :master * 1610310 / testsuite/python2-tests/ (2 files): https://github.com/shogun-toolbox/shogun-data/commit/1610310f6cfdb7543b9bfb42dae6e4a8cc66d5f322:04
shogun-notifier-shogun-data: adjust python2 data to new examples22:04
shogun-notifier-shogun: Soeren Sonnenburg :develop * 921123a / data: https://github.com/shogun-toolbox/shogun/commit/921123a17348223dc3e2a26585755528d3f6817522:04
shogun-notifier-shogun: require new data22:04
shogun-buildbotbuild #1522 of rpm1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/1522  blamelist: Soeren Sonnenburg <sonne@debian.org>22:05
shogun-buildbotbuild #419 of precise - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/419  blamelist: Soeren Sonnenburg <sonne@debian.org>22:11
shogun-buildbotbuild #2162 of deb3 - modular_interfaces is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/2162  blamelist: Soeren Sonnenburg <sonne@debian.org>22:22
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1809136922:28
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@wikingsonney2k: \o/ for python322:34
@wiking^kudos22:35
@sonney2kwiking, https://github.com/shogun-toolbox/shogun/blob/develop/tests/integration/python_modular/generator.py22:39
@sonney2ksee the blacklist?22:39
@sonney2kwe introduced that last gsoc22:39
@sonney2kbefore last gsoc22:39
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@sonney2kwe should get this down to 0 elements22:40
@sonney2kI guess all the tests marked fail on travis should work well now with our eps tolerance22:40
@sonney2kso I am tempted to enable them again22:40
shogun-buildbotbuild #1523 of rpm1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/rpm1%20-%20libshogun/builds/152322:41
shogun-buildbotbuild #33 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/33  blamelist: Soeren Sonnenburg <sonne@debian.org>22:46
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shogun-buildbotbuild #420 of precise - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/42022:48
shogun-buildbotbuild #2163 of deb3 - modular_interfaces is complete: Failure [failed test libshogun test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/2163  blamelist: Soeren Sonnenburg <sonne@debian.org>23:00
@wikingsonney2k: could give a try23:07
shogun-notifier-shogun: Soeren Sonnenburg :develop * 737f81b / tests/integration/python_modular/tester.py: https://github.com/shogun-toolbox/shogun/commit/737f81b6e139f503c8ce34fcb0b1e5780747db5723:08
shogun-notifier-shogun: decrease accuracy to 1e-1423:08
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travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1809420223:08
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@wikingalthough before doing that23:09
@wikingshould have a look at23:09
@wikinghttps://travis-ci.org/shogun-toolbox/shogun/jobs/1809420623:09
@wikingthat's travis with python 323:09
@sonney2kwiking, svmlight unknown?!23:14
@sonney2kCan't pickle <class 'SVMLight'>: attribute lookup imp.SVMLight failed23:14
@sonney2k!?23:14
@sonney2kall 3 errors exactly the same23:14
@wikingi've seen that earlier already23:15
shogun-notifier-shogun: Soeren Sonnenburg :develop * aceb8d3 / tests/integration/python_modular/generator.py: https://github.com/shogun-toolbox/shogun/commit/aceb8d3c65ef8c21831275496583faf04560a7a623:15
shogun-notifier-shogun: enable tests previously failing on travis23:15
@sonney2kwiking, for python2 too?23:15
@sonney2kwiking, I've checked some osx errors btw and they are all fishy as in numpy matrices having inf at some place and our a-b > eps tolerance test (naturally) failing23:16
@wikingsonney2k: yeah in python2 there was some time when this error23:18
@wikinghappened23:18
@wikingdunno when exactly it disappeared23:18
@sonney2kwiking, I've never seen this before23:18
@sonney2kwould be interested if protocol=3 has the same issue...23:19
@sonney2kor =023:19
@sonney2kwiking, btw I think we should have the d-ptr thing also as gsoc project23:24
@sonney2kwiking, I don't see that any of us is really starting this otherwise23:25
@sonney2kwiking, it might be good though that 3 of us are mentors for a student doing it - and it is a nice (easy) entrance task for an ML guy23:25
@wikingsonney2k: sure thing... can we find a good student for that?23:26
@sonney2kwiking, why not? I mean it should be somebody who has some ML overview and a bit of C++ - no more23:27
@sonney2konly problem is that it might be too boring....23:27
@sonney2kwiking, any idea why the analysis builders are not triggered?23:28
@sonney2khttp://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis23:28
@sonney2kis from jan 15 ...23:28
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@wikingsonney2k: mmm that was a dependent task23:28
@wikingi mean jobs23:28
@wikingbut maybe with the new additional builder tasks23:29
@sonney2kdependent on what? modular?23:29
@wikingsomething has been borken23:29
@wiking*broken23:29
@sonney2kwiking, it might be sufficient to just run this one nightly23:29
@sonney2kwiking, I mean all the analysis guys23:29
@wikingyeah23:30
@wikinglet's hope i made it in an easy way to change this :)23:30
@sonney2kwiking, from what I've seen you did :)23:30
@sonney2kat least it was easy for me to add python3 / osx23:31
@wikingsonney2k: ah ok23:32
@wikingsonney2k: analysers are dependent on modular23:32
@wikingand python3 is a modular23:32
@wikingand that was failing till now23:32
@wikingmmm23:33
@wikingok the only thing with the nightlies23:34
@wikingthat we want a bit of a distribution of these analysers23:34
@wikingas they are quite demanding :P23:34
@sonney2kwiking, well then limit them to go 1 by 123:37
@sonney2kbut nightly should be sufficient23:37
shogun-buildbotbuild #34 of osx2 - python is complete: Failure [failed test python modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/osx2%20-%20python/builds/34  blamelist: Soeren Sonnenburg <sonne@debian.org>23:38
@sonney2kwiking, btw I asked on the swig mailinglist and wsfulton said that he will do another 2.x release next weekend fixing octave libc++  ... but also 3.0.0 is soon to be released \o/23:41
@sonney2kwiking, grep cPickle *.py23:44
@sonney2kserialization_string_kernels_modular.py:    import cPickle as pickle23:44
@sonney2kserialization_svmlight_modular.py:        import cPickle as pickle23:44
@sonney2kwiking, ^exactly the things that are failing23:44
@sonney2klet me get rid of that cPickle import and good23:45
shogun-notifier-shogun: Soeren Sonnenburg :develop * 77694e6 / examples/undocumented/python_modular/ (2 files): https://github.com/shogun-toolbox/shogun/commit/77694e6e2d0726bf430d77764ee47974a54bbf5b23:47
shogun-notifier-shogun: drop the cPickle import that might kill python3 serialization tests23:47
shogun-buildbotbuild #2164 of deb3 - modular_interfaces is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/216423:50
--- Log closed Mon Feb 03 00:00:22 2014
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