IRC logs of #shogun for Saturday, 2016-03-12

--- Log opened Sat Mar 12 00:00:17 2016
--- Day changed Sat Mar 12 2016
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@HeikoSwiking: saw the build is green :)00:40
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travis-ciit's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/11542334400:51
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@HeikoSapart from this stupid segfault now00:56
@HeikoSbut previous build worked00:56
@HeikoStrying to reproduce locally  ...00:56
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shogun-notifier-shogun: Heiko Strathmann :feature/sphinxdoc * 44a0116 / tests/meta/tester.cpp: https://github.com/shogun-toolbox/shogun/commit/44a0116676fff0774e346bc8b25497aa047c9f0801:20
shogun-notifier-shogun: remove accidental double /01:20
shogun-buildbotbuild #503 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/503  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>01:20
@HeikoSlisitsyn: around?01:21
shogun-buildbotbuild #3623 of deb1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/3623  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>01:42
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shogun-notifier-shogun: Heiko Strathmann :feature/sphinxdoc * ca6a33d / doc/cookbook/README.md: https://github.com/shogun-toolbox/shogun/commit/ca6a33d6d468466c907371284e30f39987f527de01:54
shogun-notifier-shogun: mention integration tests01:54
shogun-buildbotbuild #504 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/504  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>01:54
shogun-buildbotbuild #3624 of deb1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/362401:56
shogun-notifier-shogun: Heiko Strathmann :feature/sphinxdoc * f79c3ae / .travis.yml: https://github.com/shogun-toolbox/shogun/commit/f79c3ae18403934d0a47230e7ead8d932eb69ff701:59
shogun-notifier-shogun: disable meta integration tests on redundant targets01:59
shogun-buildbotbuild #505 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/505  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>01:59
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shogun-notifier-shogun: Heiko Strathmann :feature/sphinxdoc * 664dbdd / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/664dbdd7c3cb09702aadc44309df928329885d3202:46
shogun-notifier-shogun: define meta example tests back up in original place again and check that test dir exists02:46
shogun-notifier-shogun: Heiko Strathmann :feature/sphinxdoc * c52884c / tests/meta/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/c52884c934ddc5daaa9ed52d71886b8f401339d502:46
shogun-notifier-shogun: fix test dependency to make integration test run after meta example test (fixes segfaults on travis)02:46
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shogun-buildbotbuild #506 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/506  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>02:46
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travis-ciit's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/11545988902:50
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shogun-buildbotbuild #966 of nightly_all is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_all/builds/96603:06
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travis-ciit's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/11546046403:09
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shogun-buildbotbuild #1089 of nightly_default is complete: Failure [failed test notebooks]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/1089  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Saurabh7 <saurabh.mahindre@gmail.com>, Viktor Gal <viktor.gal@maeth.com>03:41
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will__Hi, anyone here ?04:40
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@besser82wiking, ping ping?11:03
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@HeikoSlambday: jojojo11:25
@lambdayHeikoS: hola11:27
@lambdayHeikoS: back to London?11:27
@HeikoSlambday: yes11:28
@HeikoSsince yesterday11:28
@HeikoShow are things?11:28
@HeikoSover in mumbai?11:28
@lambdayHeikoS: hehe I live in Bangalore now :D11:29
@HeikoSah ok11:29
@HeikoSonce tried to find climbing shoes in my size there11:29
@HeikoSfailed ;)11:29
@lambdayhahaha11:29
@lambdayyou're 6'6"11:29
@HeikoSyes11:29
@HeikoSbig feet11:30
@lambdaythat explains it11:30
@lambday:D11:30
@HeikoSyoull see11:30
@lambdayman I am a foot smaller than you.. I'll look so puny11:30
@HeikoSlambday: saw the latest sphinxdoc patch?11:30
@lambdaynot yet11:30
@HeikoSlambday: we now have integration testing without python11:30
@HeikoSfrom the meta examples11:30
@lambdaythe cmake thing you sent ?11:31
@lambdayyes I saw that11:31
@HeikoStons of patches11:31
@lambdaythis is classic!11:31
@HeikoSbut that was the last step11:31
@HeikoSso we can merge from my side, only minor changes required now11:31
@HeikoSjust lua doesnt work11:31
@lambdayall the parts came together finally then?11:31
@HeikoSsince it doesnt support overloaded methods11:31
@lambdayreally11:31
@HeikoSI need to pick lisitsyn 's brain on some things11:32
@HeikoSlambday: and the integration tests are only doing cpp code for now11:32
@HeikoSso no swig typemap tests yet11:32
@HeikoSbut that can be added without touching many files11:32
@lambdaythis is super awesome feature man11:33
@HeikoSyes hopefully we can populate it soon11:33
@lambdayI still need to get my head around this thing though..11:33
@HeikoSlambday: but anyways, lets talk about your stuff11:33
@lambdayHeikoS: yeah..11:34
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shogun-notifier-shogun-data: Sanuj :master * 9b3adf7 / toy/ (8 files): https://github.com/shogun-toolbox/shogun-data/commit/9b3adf745aef1f23be51f8d03066401ecbae271c11:35
shogun-notifier-shogun-data: add regression datasets11:35
shogun-notifier-shogun-data: Heiko Strathmann :master * 0d5c0f6 / toy/ (8 files): https://github.com/shogun-toolbox/shogun-data/commit/0d5c0f60c839d5ddbbff61735a713cf17c209e9a11:35
shogun-notifier-shogun-data: Merge pull request #79 from sanuj/master11:35
shogun-notifier-shogun-data:11:35
shogun-notifier-shogun-data: add regression datasets11:35
@lambdayso, I did some refactoring again... at present I have a general data manager.. that does all those fetching stuffs... give it any kind of feature (streaming, non-streaming), it can fetch blockwise/as a whole, as required11:35
@lambdayI was working on small optimizations11:35
@lambdayHeikoS: please have a look at https://github.com/lambday/flash/tree/develop/src/flash/statistics11:35
@lambdaythis is how the wrapper API would take shape11:36
@lambdayit is pretty similar to what we have now..11:36
@lambdayjust that, we don't need separate tests for Streaming specially...11:36
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@lambdaywe can write LinearTimeMMD or LinearTimeHSIC11:36
@lambdayand give it normal, it will work.. give ti streaming, it will work11:36
@lambdaya la data manager11:37
@HeikoSwhat files to look at first11:37
@lambdayHeikoS: check the wrappers first... that's in that statistics directory itself11:37
@lambdaythen nasty things are inside internals11:37
@HeikoSlambday: I see these are the wrappers that make it available in shogun?11:38
@lambdayHeikoS: exactly..11:38
@lambdaymodular interfaces for these would be available11:39
@HeikoSthe interface looks very clean11:39
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@lambdaybefore I add kernel related stuffs, I wanted to show you how it is taking shape..11:39
@HeikoSlambday: yeah definitely11:39
@lambdaygood thing is, we don't need anything special for streaming..11:39
@HeikoSok these interfaces are what we have basically?11:39
@lambdayyes.. I'll add kernel and compute stuffs iteratively..11:40
@HeikoSlambday: cool11:40
@HeikoSany particular thing I should check out in internals?11:41
@lambdayabout the processing, we care about blockwise... as you said, one can store the entire data but may be interested in processing it blockwise.. he don't need to make it a streaming.. we take care of it on our own11:41
@lambdayif he provides streaming, it works with that too just as smoothly11:41
@lambdayHeikoS: yes check this data manager11:41
@lambdayit provides simples API for setting the samples/num_samples11:42
@lambdayit knows how many different distributions we are working with.. so it does those things internally..11:42
@lambdayit also provides an iterator of some sort.. for fetching the data..11:42
@lambdaylet me show you an example11:42
@HeikoSyes just checking things11:42
@HeikoSquite nie11:43
@HeikoSnice11:43
@lambdayHeikoS: https://github.com/lambday/flash/blob/develop/tests/DataManagerTest.cpp11:43
@HeikoSah yes the iterator thing is nice11:43
@HeikoSoh wow lots of cases already work11:45
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@HeikoSlambday: will be interesting to tune these parameters11:45
@HeikoSnum blocks per burst11:45
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@lambdayHeikoS: yeah that would be good..11:46
@HeikoSlambday: I guess one goes for max size the memory can take11:46
@HeikoSbut then there is paging11:46
@HeikoSbut anyways11:46
@HeikoScool design11:46
@HeikoSI think this is quite nice11:46
@lambdaywould be nice if the framework can determine best size :D11:46
@HeikoSand then combined with the super simple interface (that can be part of shogun core after plugins arrived)11:46
@HeikoSvery good11:47
@lambdayHeikoS: yes that's the plan.. that's what the wrappers are for..11:47
@HeikoSlambday: so you were talking about making it possible to run this stuff without shogun?11:47
@lambdayit won't care about all those complex internal shits11:47
@lambday:D11:47
@HeikoSbut now CFeatures is in the data manager11:47
@lambdayHeikoS: yes... so I was thinking of a register_feature_class(..) method in data manager11:47
@HeikoSlambday: I see11:47
@lambdayit would use Any (lisitsyn)11:48
@HeikoSlambday: maybe leave that optional for now11:48
@lambdayyes that's why as of now it works with shogun features11:48
@HeikoSlambday: since if we have plugins, it is no problem to ship a shogun with only the testing classes11:48
@HeikoSso all good there11:48
@lambdayyeah..11:48
@HeikoSbut might be worth an idea to do something like lisitsyn did with tapkee11:48
@HeikoSespecially with the paper11:48
@lambdaybut it would be good for experimental feature classes..11:48
@HeikoSbut on the other hand if shogun is easy to ship it doesnt matter11:48
@HeikoSyes true11:49
@lambdayfor example, say, for sparse dot features, I want to use another sparse matrix in the backend..11:49
@lambdayI write a feature class, register with data manager.. and it streams11:49
@HeikoScool idea11:49
@HeikoSindeed11:49
@HeikoSthat is useful11:49
@lambdayI am keeping these out of the eq as of now.. but I have the idea11:50
@HeikoSlambday: what are your plan re the STL things in internals?11:50
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@lambdayHeikoS: since it's all cpp, it won't matter.. stl is useful11:50
@lambdayin wrappers it won't show up11:50
@lambdaythe entire data manager is inside pimpl11:51
@HeikoSlambday: sure, I agree11:51
@lambdayso we can change as much as we want11:51
@HeikoSlambday: but there is a risk of partitioning shogun as well11:51
@HeikoSso all such things should also be possible to put in main shogun11:51
@HeikoSbut I guess that is possible11:51
@HeikoSwhat about the error stream?11:51
@lambdayHeikoS: you're talking about the logs?11:52
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@lambdayI'll change those to SG_DEBUG/INFO while sending a patch11:52
@HeikoSlambday: SG_INFO SG_DEBUG etc11:52
@HeikoSyeah that might be good to keep uniform11:52
@HeikoSand what about sergey's some?11:53
@lambdaybut other stl things, like vector, lambdas, for_each.. those can stay11:53
@HeikoSlambday: I am just thinking loudly here btw, not saying this hsould be changed11:53
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@HeikoSjust really wondering whether this might cause problems later, or make the code too different from other shogun11:53
@lambdayHeikoS: some is useful.. I am redoing what some does here anyway.. REFing first, then making sure that the destructor calls SG_UNREF11:54
@HeikoSok11:54
@lambdayso using some is the way to go11:54
@lambdaybut I intend to use that only for the SGObjects that are passed from outside the framework..11:54
@HeikoSlambday: because if we do things totally different anyways, we can just create a seperate lib in seperate repo, and then just wrap it in shogun11:54
@HeikoSlambday: but as said, just thinking loud11:54
@lambdayfor the temp objects that are generated within the framework, we don't need to use SG_REF/UNREF and we can just use std::shared_ptr11:54
@lambdayHeikoS: yeah that's why I tried to use non shogun specific things11:55
@lambdayHeikoS: this flash thing is a separate repo anyway..11:55
@lambdaywhile sending PR I'll make those to some..11:56
@lambdaybut for internal objects, maybe shared_ptr itself would suffice (those that are invisible from the wrappers)11:57
@HeikoSlambday: on the other hand, it would be good if some of the design ideas flow back into main shogun11:57
@HeikoSlambday:  not sure, but we can see11:57
@lambdayHeikoS: yeah..11:58
@HeikoSlambday: ok so what are the next steps?11:58
@HeikoSand what is the timeline?11:58
@HeikoSgood to keep that in mind11:58
@lambdayHeikoS: did you check the samples_at(i) methods? :D11:58
@lambdayHeikoS: ok today I was working on the kernel manager.. similar principle..11:58
@lambdayjust that it gives an extra interface to precompute the kernel..11:59
@lambdaythe wrapper would ask the user whether the user *don't* want to precompute..11:59
@HeikoSlambday: yes I checked them, why?11:59
@lambdayand then would call the precompute accordingly11:59
@HeikoSlambday: sounds good11:59
@lambdayHeikoS: ah that setter looks good.. we use it as a setter :  datamgr.samples_at(i) = cfeature_obj;... (which iternally does a couple of thing)... and again we can use it as a getter, auto feats = datamgr.samples_at(i)12:01
@lambdaywrappers wrap these around with set_p, get_p etc12:01
@HeikoScool12:01
@lambdayHeikoS: https://github.com/lambday/flash/blob/develop/src/flash/statistics/internals/InitPerFeature.h12:01
@lambdaythis object does the job12:01
@HeikoSso let me understand that12:03
@HeikoSInitPerFeature(fetchers[i]);12:03
@HeikoScreates this init thing with the fetcher inside12:03
@HeikoSand then you have the = operator to assign features12:04
@HeikoSclever12:04
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@lambdayyes.. but the fetcher itself is not set.. it just sends the reference... so that the init thing would create the fetcher (base on the feature type) and assign it to that12:04
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@lambdayHeikoS: looks good :)12:04
@lambdayAPI-wise12:04
@HeikoSyep12:05
@lambdayand this temp obj creation is done *only once*.. while setting the features.. for getting we're not doing that, rather getting the feature object directly12:05
@HeikoSI like the clever design inside12:05
@lambdaysince we'll be *get*ing a lot than setting12:05
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@lambdaykernel manager would also provide similar API12:06
@lambdaykernel_at(i), precompute_kernel_at(i), reset_kernel_at(i)12:06
@lambdaywe can call methods on them12:06
@HeikoSlambday: yeah I get it12:06
@lambdaydirectly12:06
@HeikoScool, whats next after kernel manager?12:07
@lambdayHeikoS: the compute logic..12:07
@lambdayso, computing statistic/p-value is similar in most cases.. it's the individual terms that differ12:07
@HeikoSin the sense of how to compute the h-terms?12:07
@HeikoSyes it is all u or v statistics12:08
@HeikoSthat is sum sum h_ij12:08
@lambdayyeah.. so for computing the terms itself, I'll use separate functors.. the other logic would be taken care of in the wrapper..12:09
@lambdayor maybe some fancy compute engine stuff.. haven't though this much yet12:09
@HeikoSlambday: I guess starting simple is good12:09
@HeikoSsingle machine multiple cores12:10
@lambdayHeikoS: yeah..12:10
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@lambdayHeikoS: so about the timeline, I am planning to finish this framework within the next week..12:10
@HeikoSlambday: is that realistic as well? ;)12:10
@lambdayso we're ready to add linear time hsic, one sample test12:11
@lambdayHeikoS: haha I can finish in the separate repo at least.. merging all these things into shogun would take time12:11
@HeikoSlambday: yeah12:11
@lambdaybut I want to keep this thing ready12:11
@HeikoSyou think it is good to move to a feature branch soon and add things to the build?12:11
@lambdayHeikoS: that might be good..12:12
@HeikoSlambday: not sure, just asking12:12
@lambdayHeikoS: give me a week.. some of these things need a bit more polishing.. I don't wanna break buildbot already :D12:14
@lambdayplus I need to remove c++14 things from this.. I just use those since it's a poc..12:14
@HeikoSlambday: sure :)12:14
@lambdayviktor would kill me if he sees those :D12:14
@HeikoSlambday: buildbot doesnt build feautre branch does it?12:14
@HeikoSmorethinkinga bout travis12:14
@HeikoSlambday: sure12:15
@HeikoSlambday: we will porbably postpone the c++11 transition for a bit12:15
@lambdaycool..12:15
@HeikoSbut you can use c++11 and just guard it12:15
@HeikoSnot available without c++1112:15
@HeikoSno alternative implementation please ;)12:15
@lambdaymaybe I'll try to make linalg c++9812:15
@HeikoSwe can do that for existing methods that we already have12:15
@lambdayokay12:15
@HeikoSdont bother12:15
@HeikoSwe will change to 11 at some point12:15
@HeikoSand this is new stuff anyways12:16
@HeikoSmore for us at this point12:16
@lambdayall of these are super useful..12:16
@lambdayspecially memory management, lambdas..12:17
@lambdayI use them on a regular basis12:17
@lambdayHeikoS: I should also write an update for arthur..12:17
@HeikoSlambday: no dont worry12:18
@HeikoSill tell him12:18
@HeikoShe was talking about implementing something else12:19
@HeikoSbut I tried to hold him back for now12:19
@HeikoSsince we want this to be done before we start thinking about deep mean maps12:19
@HeikoSbut might do this as well at some point12:19
@HeikoSfor now lets finish this framework and do experiment12:19
@HeikoSso no need to write him12:19
@lambdayHeikoS: that would come under this framework as well?12:19
@HeikoShe doesnt care about internals anyways, just wants it done ;)12:19
@HeikoSlambday: no it is a bit different, that is why I think it should wait12:20
@lambdayHeikoS: cool.. time to crank things up a notch then..12:21
@HeikoSyes definitely12:21
@HeikoSlambday: looking good12:21
@lambdayHeikoS: okay so keeping this in mind, I'll say, I finish it in "flash" first.. then will merge it in shogun12:21
@HeikoSyes definitely12:21
@lambdaycause that would take some time12:21
@HeikoSand then experiments12:21
@HeikoSsystematic ones12:22
@HeikoSwith a fast shogun12:22
@HeikoSbut also cookbook examples retc12:22
@HeikoSwe want people to use this stuff!12:22
@HeikoSok great12:22
@HeikoSlet me know how things go12:22
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@lambdayHeikoS: sure man..12:22
BurningBearhello! I am Xionghui Chen, a second year undergraduate student from Southeast University China. I'd like to join in Shogun and work with you! Pleasure to meet you!12:24
@HeikoSBurningBear: pleasure to mee toyu too12:25
@HeikoSwelcome12:25
@HeikoSplease join us12:25
@HeikoScheck out the wiki we have12:25
@HeikoSand send patches -- that is the best way to get involved :)12:25
BurningBearIt is my first time to use IRC. Besides, it is my first time to use English to chat with others  :)12:26
@HeikoSBurningBear: haha, nice!12:28
@HeikoSgood to learn english here on irc12:28
@HeikoSyou will get used to it quickly12:28
BurningBearhaha, this is a cool place!12:30
@HeikoSBurningBear: it is the coolest on earth 8-)12:30
@HeikoSBurningBear: did c++ hacking in the past?12:34
BurningBearC++ hacking?12:38
@HeikoSyes12:38
@HeikoSprogramming in c++ ?12:38
BurningBearhaha yes12:39
@HeikoSBurningBear: what is it that interestes you in shogun?12:42
shogun-notifier-shogun: Heiko Strathmann :feature/sphinxdoc * adf6924 / examples/README: https://github.com/shogun-toolbox/shogun/commit/adf6924f1f7293c12f10f59d262d5ceb37e05c8e12:43
shogun-notifier-shogun: mention that meta examples are coming soon12:43
shogun-buildbotbuild #507 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/507  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>12:43
BurningBear"c++ hacking" is an strange phrase for me,so I did not understand it just now :)12:43
BurningBearwell, I am very curious about Machine Learning!12:44
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shogun-notifier-shogun: Heiko Strathmann :develop * 42e03af / / (199 files): https://github.com/shogun-toolbox/shogun/commit/42e03aff3aa9c336185ff0c56c65aa707aeb47e612:49
shogun-notifier-shogun: Squashed commit of the following:12:49
shogun-notifier-shogun:12:49
shogun-notifier-shogun: commit aa3c44693c1d67ea34a713eecdfc70db6b4c09bb12:49
shogun-notifier-shogun: Author: Heiko Strathmann <heiko.strathmann@gmail.com>12:49
shogun-notifier-shogun: Date:   Sat Mar 12 11:40:40 2016 +000012:49
shogun-buildbotbuild #508 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/508  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>12:49
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@HeikoSlambday: its merged!12:58
@lambdayHeikoS: awesome! so buildbot will now run the integration tests from meta now?12:59
@HeikoSlambday: yes13:02
lisitsynHeikoS: oh that's awesome endeavor by you13:02
@HeikoSlisitsyn: hope I did not break too many things with the merge ;)13:03
@HeikoSlisitsyn: will you be around later?13:03
@HeikoSlisitsyn: have a few questions13:03
lisitsynHeikoS: probably13:03
lisitsynok13:03
@HeikoSlisitsyn: its about this integration testing in other languages13:03
@HeikoSlisitsyn: currently, only cpp works13:03
@HeikoSbut it would be good to have the others as well13:03
lisitsynyeah13:03
@HeikoSin c++ I can do it because it is type safe13:03
@HeikoSlisitsyn: but yeah gotta go now, talk later13:04
lisitsynok ping me13:04
@HeikoSlisitsyn: will do,13:04
@HeikoSlisitsyn: btw: I think travis will be fine. but the buildbot will definitely complain13:04
lisitsynlets see13:04
@HeikoSlisitsyn: I expect doxygen stuff and c++11 guards to be an issue, but will see once we have th elogs13:04
@HeikoSyeah13:04
@HeikoSsee you13:05
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lisitsynwiking: maybe lets switch to irc?13:48
@wikinglisitsyn: ok13:49
@wikingalthough i'm on a train13:49
lisitsynah13:49
@wikingso i'll be a bit hecktic13:49
@wikingonce i leave the city13:49
@wiking;)13:49
@wikingvut i'm in the city for the next 10-15 minutes13:49
@wiking*but13:50
lisitsynwiking: I would go with virtualenv13:50
lisitsyncan you install it so I create some venv13:50
lisitsynto run flask thingy13:50
@wikingjust tell me if u need me to install anything13:50
@wikingok lemme see13:50
@wikingok13:51
@wikingpip installed virtualenv13:51
@wikingyou should be able to whatever you want13:51
lisitsynyes it works13:51
lisitsynok git is here13:51
@wikinganything else?13:51
lisitsynwiking: what about nginx?13:51
@wikingmmm13:51
@wikingah yeah13:51
@wikinglemme see13:51
lisitsynwiking: it would make sense to have some rule for beta.shogun-toolbox.org13:52
lisitsynwhich proxy_passes it to localhost:820013:52
lisitsynwiking: http://pastebin.com/Xmym8Ghq13:54
lisitsynthis13:54
lisitsynah sorry not 808013:54
lisitsynjust choose any port that is free13:54
lisitsynwiking: do we run nginx behind some other proxy?13:55
@wiking8200 is free13:56
@wikingnot that i know of13:56
@wikingbut that doesn't mean anythign13:56
lisitsynwiking: where listen at port 80 is defined?13:56
@wikingRestarting nginx: nginx: [emerg] bind() to 0.0.0.0:80 failed (98: Address already in use)13:57
@wiking:)13:57
@wikinginteresting13:57
lisitsynI see listening on localhost:8013:57
lisitsynargh13:57
lisitsyn:810013:57
lisitsynand ..13:57
lisitsynbut 80?13:57
@wikingdunno13:57
@wikingyet13:57
@wikingtrying to figure out with lsof13:57
@wikingpound13:58
@wiking/etc/pound/pound.cfg13:58
lisitsynok I see13:58
@wikingok so no need for nginx13:59
@wikingwe could directly send from here13:59
@wikingto the uwsgi13:59
lisitsynwiking: yeah may be13:59
lisitsynwiking: although I know working configuration for nginx13:59
lisitsynlike proxy_set_header ..13:59
lisitsynnot sure about pound14:00
@wikingmmm14:00
@wikingi'm finwe with anything :)14:00
lisitsynyes but I mean it would be faster to just put on some redirect in pound14:00
lisitsynlike we do for django14:00
@wikinglisteining :D14:00
@wiking(i have 0 braincells... i slept 2 hours today14:01
lisitsynwiking: static is dead now14:01
@wikingis it?14:02
lisitsynyes14:02
lisitsyn50314:02
@wiking:<14:02
@wikingah yeah14:02
@wikingnginx is not starting14:02
@wikingdunno why14:02
lisitsynwiking: put listen into this beta14:03
lisitsynlisten 127.0.0.1:820014:03
@wikingi mean i know why but i wonder how was it running till now14:03
@wikingbut nginx is dead now14:03
@wikingbut i have 0 idea wh14:04
@wikingbecause port 80 was taken14:04
@wikingbefore already14:04
lisitsynwiking: 80 is taken by pound I guess?14:04
lisitsynwiking: in current conf, beta takes 8014:04
@wikingyes14:04
lisitsynthis is why nginx is dead14:04
@wikingwhere does it take 80?14:04
lisitsynno listen in beta14:04
lisitsyn=> listen 0.0.0.0:8014:05
lisitsynby default14:05
lisitsyniirc14:05
@wikingoooh14:05
@wikingi see14:05
@wiking:)))14:05
@wikingsee me fail :)14:05
lisitsynmy fail actually as I forgot to add that listen in the paste14:05
lisitsynok still 503?14:06
lisitsynis it up?14:06
@wikingrunning14:06
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lisitsynwoohoo14:06
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lisitsynwiking: back to live14:07
@wikingi'm gonna fall asleep like looking at the irc :D14:07
lisitsynhaha14:07
lisitsynwiking: we actually would need to change that later so flask is served by something parallel14:08
lisitsynall these wsgi things14:09
lisitsynwiking: still here?14:10
@wikingand naively i though i'm gonna work for the whole time :)14:12
@wikingyes14:12
@wikingjust having gaps in the 4g network14:12
lisitsynwiking: one more reconfig needed :(14:12
@wikingshoot14:12
lisitsynwiking: we now listen at 8200 but proxying it to 820014:12
lisitsynthe latter should be something else14:13
lisitsynlike 820114:13
@wikingok doing it as soon as i have nets14:13
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lisitsynwiking: and the last thing would be - how to set up beta.shogun-toolbox.org record14:15
lisitsyndo you have the access?14:16
lisitsynif no shogun-toolbox.org I see you have shogun.ml14:16
lisitsynbeta.shogun.ml would work too - but then its nginx again14:17
@wikingi.e. not for shogun-toolbox.org14:17
@wikinghow do i specify multi server_name14:17
@wikingor alias14:17
@wikingin nginx?14:17
lisitsynwiking: I think it should already work if beta.shogun-toolbox.org is resolved14:17
lisitsynwiking: but there is no dns record I guess14:18
lisitsynwiking: we have one for demos.shogun-toolbox.org14:18
@wikingi cannot add to shogun-toolbox.org14:20
@wikingi can add to shogun.ml14:21
@wikingthat's why i ask14:22
@wikinghow can i add an alias14:22
@wikingto the nginx config14:22
@wiking    server_name beta.shogun-toolbox.org;14:22
lisitsynah14:22
lisitsynwiking: I think that's in pound14:22
@wikingbut it's in nginx as well14:23
@wikingbut ok i'm checking pound14:23
lisitsynwiking: how the heck it works..14:23
lisitsynwiking: there is no mention of shogun.ml in nginx14:24
sanujlisitsyn: I'm working on regression cookbook14:30
sanujlisitsyn: after training and applying what shall be done?14:30
sanujlisitsyn: should i calculate mean squared error?14:31
lisitsynsanuj: you could estimate the erorr14:31
lisitsynyes14:31
lisitsynmakes sense to me14:31
sanujlisitsyn: cool14:31
sanujlisitsyn: in the older version of knn.sg14:32
sanujreal accuracy = eval.evaluate(labels_predict, labels_test)14:32
sanujwhat is 'real' here14:32
lisitsynlike a real number14:32
lisitsyna float14:32
sanujlisitsyn: okay14:32
sanujit was not mentioned in the meta example wiki, that's why i asked :)14:33
lisitsynsanuj: yeah probably it should have been14:33
lisitsynlet me check14:34
sanujlisitsyn: there is float but not real14:34
lisitsynI see14:34
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shogun-notifier-shogun: Heiko Strathmann :develop * b37ff4f / doc/cookbook/README.md: https://github.com/shogun-toolbox/shogun/commit/b37ff4feb8ef3fb3c4fb4295ed02a00fe5b945a114:43
shogun-notifier-shogun: update links in readme14:43
shogun-notifier-shogun: Heiko Strathmann :develop * fd151b5 / NEWS: https://github.com/shogun-toolbox/shogun/commit/fd151b54dd81c52dec4ce82a3b563673de654ba514:43
shogun-notifier-shogun: mention cookbook and new tests14:44
shogun-buildbotbuild #509 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/509  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>14:44
lisitsynHeikoS: wiking granted me access, we also set up something14:44
@HeikoSlisitsyn: nice one14:44
lisitsynjust one more thing and beta.shogun.ml would be online14:44
@HeikoSlisitsyn:  nice14:44
lisitsynHeikoS: next, I will set up some auto deploy14:44
@HeikoSlisitsyn: do you have access to buildbot?14:45
@HeikoShttp://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/497/steps/configure/logs/stdio14:45
@HeikoScan you install python-ply there?14:45
lisitsynHeikoS: no, I don't14:45
@HeikoSlisitsyn: ok14:45
@HeikoSwiking: ^14:45
@HeikoSlisitsyn: cool then we can just git push to website?14:46
lisitsynHeikoS: yes14:46
lisitsynat some point you just do14:46
lisitsyngit push production14:46
lisitsynand it is restarted with the new version14:46
lisitsynHeikoS: we can do it even more automatic but not sure if needed14:47
@HeikoSah yes very nice14:47
@HeikoSthen its easy to edit website14:47
@HeikoSvery good14:47
lisitsynyes14:47
lisitsynat some point we make a switch14:47
@HeikoSalso good with the twitter and github feed14:47
@HeikoSI use shoguns twitter these days14:47
@HeikoSas news14:47
@HeikoScool14:47
@HeikoSlet me know how things go14:47
lisitsynHeikoS: I just need some DNS record now14:48
lisitsyncan play with it afterwards14:48
@HeikoSlisitsyn: cool14:50
@HeikoSlisitsyn: man so many good things happening atm14:50
lisitsynHeikoS: TOO MANY14:50
lisitsyn:D14:50
@HeikoShaha14:50
@HeikoSwait until the student applications can be submitted ;)14:50
lisitsynHeikoS: I am now running a team of 6 including me14:51
@HeikoSat work=?14:51
lisitsynyes14:51
lisitsynand everything is too many for me now14:51
lisitsyn:D14:51
@HeikoShaha14:51
@HeikoSwell14:51
@HeikoSyou can only grow14:51
@HeikoShow is it going with the team?14:51
lisitsynHeikoS: pretty much fine14:52
lisitsynHeikoS: but I am having a hard time with switching as I said :)14:53
@HeikoSyeah I know what you mean14:53
lisitsynbut wiking said NO EXCUSES14:54
@HeikoSlisitsyn: yes NO EXCUSES14:55
@HeikoSnever14:55
Saurabh7hey HeikoS14:59
@HeikoSSaurabh7: hi14:59
Saurabh7have_linalg is zero if c++11 is available but viennacl is not ?14:59
@HeikoSSaurabh7: I dont get your question15:00
Saurabh7HeikoS, i mean the guard will become a check for viennacl15:00
Saurabh7only15:01
@HeikoSif c++11 is available, then HAVE_LINALG is always 115:01
@HeikoSsince we now have eigen3 as default15:01
@HeikoSat least thats how it shoud be15:01
@HeikoSis it not?15:01
Saurabh7HeikoS, https://github.com/shogun-toolbox/shogun/blob/develop/CMakeLists.txt#L77515:02
Saurabh7its not i think15:02
@HeikoSI see15:03
@HeikoSso if vienna cl is not there, linalg is not there15:03
@HeikoSdid I delete this by accident, et me check15:03
Saurabh7yes :)15:04
@HeikoSSaurabh7: https://github.com/shogun-toolbox/shogun/commit/7339764920061d35581287f2483c24cc6187901e#diff-af3b638bc2a3e6c650974192a53c7291R75315:05
@HeikoSyes I broke it15:05
@HeikoSfixing15:05
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travis-ciit's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/11552368015:19
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@HeikoSSaurabh7: https://github.com/shogun-toolbox/shogun/pull/306315:26
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Saurabh7HeikoS, cool ! that should do it15:30
@HeikoSyes I think15:31
Saurabh7HeikoS,  also we cant run just unit tests locally now ? need meta test suite too?15:33
@HeikoSSaurabh7: unit tests are independent of meta15:33
@HeikoSso you can run them15:34
Saurabh7hm i am  trying with only DENABLE_TESTING and its says Test suite for meta examples does not exists!15:35
Saurabh7lemme check15:35
@HeikoSSaurabh7: which OS?15:41
@HeikoSSaurabh7: do a git pull in the data directory15:41
Saurabh7ubuntu 14.0415:42
Saurabh7yup i dont have the data files15:42
Saurabh7but i have BUILD_META_EXAMPLES off15:42
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--- Log closed Sat Mar 12 16:30:37 2016
--- Log opened Sat Mar 12 16:30:47 2016
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uzipazhey guys20:55
uzipazi have a question about installing shogun20:55
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uzipazI am using cygwin on Win7 to compile and install shogun, I cloned the repository from github and used 'cmake ..' command to install shogun but its giving me error at the end21:00
uzipaz'-- Configuring incomplete, errors occurred!'21:00
uzipazapparently, cmake cannot find functions isfinite, isinf, isnan, signgam, fdopen, powl, lgammal21:01
uzipazdoes anybody know about how to solve this?21:03
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uzipazalso, few libraries such opencl, viennacl, nlopt, lpsolve, colpack, arprec could not be found by cmake, are these libraries necessary for shogun?21:11
uzipazi cannot proceed to make until resolve the above mentioned errors reported by cmake... I will appreciate any help on this21:13
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shogun-buildbotbuild #510 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/510  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>21:55
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shogun-notifier-shogun: Heiko Strathmann :develop * 7623c4e / doc/cookbook/README.md: https://github.com/shogun-toolbox/shogun/commit/7623c4edbc4b1664667cc7d2e0a86f9509a124ea21:55
shogun-notifier-shogun: add a point to the guidelines21:55
shogun-notifier-shogun: Heiko Strathmann :develop * b26a772 / doc/cookbook/source/examples/classifier/knn.rst: https://github.com/shogun-toolbox/shogun/commit/b26a772cbd06be8bcc8b38545dcfb5c13786f0db22:05
shogun-notifier-shogun: remove print since nothing is printed22:05
shogun-notifier-shogun: Heiko Strathmann :develop * e744369 / / (2 files): https://github.com/shogun-toolbox/shogun/commit/e744369d30c9a489c4bdbbc325387b6409e0871422:05
shogun-notifier-shogun: use multiclass apply as it makes more sense22:05
shogun-buildbotbuild #511 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/511  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>22:05
shogun-notifier-shogun: Heiko Strathmann :develop * 38f2933 / doc/cookbook/README.md: https://github.com/shogun-toolbox/shogun/commit/38f293373387693ae144458e0f9474a7bfc18de122:06
shogun-notifier-shogun: add a note on interfaces22:06
shogun-buildbotbuild #512 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/512  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>22:06
shogun-notifier-shogun: Heiko Strathmann :develop * 75ecdf2 / doc/cookbook/source/examples/classifier/knn.rst: https://github.com/shogun-toolbox/shogun/commit/75ecdf25a3f1261d15961672baeff5139c78eeda22:20
shogun-notifier-shogun: mini doc fix22:20
shogun-buildbotbuild #513 of trusty - libshogun - viennacl is complete: Failure [failed configure]  Build details are at http://buildbot.shogun-toolbox.org/builders/trusty%20-%20libshogun%20-%20viennacl/builds/513  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>22:20
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@HeikoSbesser82: yoyo22:51
@besser82HeikoS, yo! ^^22:51
@besser82'sup?22:51
@HeikoSbesser82: 2 questions:22:51
@besser82kk22:51
@HeikoScould you check your email: I invited you as GSoC metnor22:51
@HeikoSwhat is up with dynaplugz?22:52
@besser82just completed sign-up for gsoc22:56
@besser82Dynaplugz should in first alpha during tomorrow22:57
@HeikoSbesser82: thanks :)22:58
@HeikoSnice looking forward to see it22:58
@HeikoSyou can then also help mentoring a person on it22:58
@HeikoSwe already had a few ppl asking questions about plugin project22:58
@besser82great, so we have man-power for this22:59
@HeikoSyeah22:59
@HeikoSbtw feel free to add yourself on here, and also edit things (put a link to dynaplugz)22:59
@HeikoShttps://github.com/shogun-toolbox/shogun/wiki/GSoC_2015_plugin22:59
@besser82done so23:15
@HeikoSbesser82: sweet23:20
@HeikoShow are things in general?23:21
@besser82Not too bad…  And yourself?23:21
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--- Log closed Sun Mar 13 00:00:21 2016

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