| --- Log opened Tue Aug 23 00:00:17 2016 | ||
| -!- OXPHOS [4441a916@gateway/web/freenode/ip.68.65.169.22] has joined #shogun | 00:28 | |
| @wiking | OXPHOS, ping | 02:40 |
|---|---|---|
| @wiking | :) | 02:40 |
| OXPHOS | wiking: hey | 02:41 |
| @wiking | OXPHOS, https://github.com/shogun-toolbox/shogun/blob/feature/linalg_refactor/src/shogun/lib/SGMatrix.h#L39-L40 | 02:43 |
| @wiking | https://github.com/shogun-toolbox/shogun/blob/feature/linalg_refactor/src/shogun/lib/SGVector.h#L44-L48 | 02:43 |
| @wiking | these are explicitly moved to public | 02:43 |
| @wiking | in develop | 02:43 |
| OXPHOS | wiking: ohhhh i see. sure please move them out. I think the friend class can also be removed | 02:44 |
| @wiking | and the other patch i needed to fix | 02:45 |
| @wiking | that in euclideandistance the precompute becomes like this https://github.com/shogun-toolbox/shogun/blob/develop/src/shogun/distance/EuclideanDistance.cpp#L83-L94 | 02:47 |
| @wiking | i.e. no linalg::dot involved | 02:47 |
| @wiking | anyhow thye are really minor changes | 02:47 |
| @wiking | so if you dont mind | 02:47 |
| @wiking | i'll do now a forcepush to the branch | 02:47 |
| @wiking | that way the branch gets rebased on develop | 02:48 |
| OXPHOS | wiking: sure please go ahead! | 02:51 |
| @wiking | ok? | 02:51 |
| @wiking | ok pushing! | 02:51 |
| @wiking | done | 02:55 |
| -!- shogun-notifier- [~irker@7nn.de] has joined #shogun | 02:56 | |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * f4cc9b6 / / (16 files): https://github.com/shogun-toolbox/shogun/commit/f4cc9b6f2362a99cea5a8fbae009c10632929c9a | 02:56 |
| shogun-notifier- | shogun: working version | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 7935f14 / / (27 files): https://github.com/shogun-toolbox/shogun/commit/7935f143afdd65371d4eebf0375fdb55dbda0ddd | 02:56 |
| shogun-notifier- | shogun: set default cpubackend | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * d291a7e / src/shogun/mathematics/linalgrefactor/ (5 files): https://github.com/shogun-toolbox/shogun/commit/d291a7e291da32c67d3eeec37967d3fdb54b9377 | 02:56 |
| shogun-notifier- | shogun: const | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * dad5a09 / src/shogun/mathematics/linalgrefactor/ (10 files): https://github.com/shogun-toolbox/shogun/commit/dad5a09e2231af8400d068d2fdd915b5c82e81f8 | 02:56 |
| shogun-notifier- | shogun: float32 | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 19f155b / benchmarks/linalg_refactor_benchmark.cpp: https://github.com/shogun-toolbox/shogun/commit/19f155b042f0b360f52ffacfbb56380030e44b63 | 02:56 |
| shogun-notifier- | shogun: CPU and GPU dot | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * e60796d / / (20 files): https://github.com/shogun-toolbox/shogun/commit/e60796deae2bfce72401b552adcda4fbe5395efd | 02:56 |
| shogun-notifier- | shogun: fix style | 02:56 |
| shogun-notifier- | shogun: Linalg-SGVector-add | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 1b28003 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/1b2800316c36c982d3ccbdef1f996cee34c4c364 | 02:56 |
| shogun-notifier- | shogun: Remove linalg::dot | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 8573dbb / src/shogun/mathematics/linalg/LinalgBackendViennacl.h: https://github.com/shogun-toolbox/shogun/commit/8573dbb296acdbf5132b5a26bb5ad49210f8c465 | 02:56 |
| shogun-notifier- | shogun: Linalg_ViennaCL_typecast_helper_method | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * bda14ca / tests/unit/mathematics/linalg/operations/Viennacl_operations_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/bda14caee43639d44bb28fbcdcfbb71af0f8a1e1 | 02:56 |
| shogun-notifier- | shogun: fix viennacl unittest | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3011d59 / src/shogun/mathematics/linalg/ (3 files): https://github.com/shogun-toolbox/shogun/commit/3011d5929143686db73e1ff30ba56f871e2f29de | 02:56 |
| shogun-notifier- | shogun: add DEFINE_FOR_ALL_PTYPE macro | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3071eb1 / src/shogun/ (6 files): https://github.com/shogun-toolbox/shogun/commit/3071eb1b638cff9871d46eb30568dacfe6f60495 | 02:56 |
| shogun-notifier- | shogun: update linalg for SGMatrix compatibility | 02:56 |
| shogun-notifier- | shogun: | 02:56 |
| shogun-notifier- | shogun: - change gpu_vector to gpu_ptr | 02:56 |
| shogun-notifier- | shogun: - change SGVector<> to Container <> in macros | 02:56 |
| shogun-notifier- | shogun: - left methods implementations intact as some methods are not SGMatrix | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 4afe07f / src/shogun/mathematics/linalg/LinalgBackendGPUBase.h: https://github.com/shogun-toolbox/shogun/commit/4afe07f7099fce923bee4899677f297ce4d75eb6 | 02:56 |
| shogun-notifier- | shogun: update LinalgBackendGPUBase macros | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 0c66fdf / / (8 files): https://github.com/shogun-toolbox/shogun/commit/0c66fdfa7fadc0ea3b9904dac1db138f30ec0f3e | 02:56 |
| shogun-notifier- | shogun: linalg-sgvector-add-inplace | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 52a1e9f / / (6 files): https://github.com/shogun-toolbox/shogun/commit/52a1e9f9229e129d33d05e4d559df2e92878f5cb | 02:56 |
| shogun-notifier- | shogun: linalg-sgmatrix-add | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3c6c849 / / (6 files): https://github.com/shogun-toolbox/shogun/commit/3c6c8499a7776716d325226c1297815ac83a1442 | 02:56 |
| shogun-notifier- | shogun: linalg-sgvector&sgmatrix-scale | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * b61e283 / / (7 files): https://github.com/shogun-toolbox/shogun/commit/b61e283d171cd2b3f466f22e389f4a35e01487b8 | 02:56 |
| shogun-notifier- | shogun: linalg-sgvector&sgmatrix-max | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * cb815ea / / (6 files): https://github.com/shogun-toolbox/shogun/commit/cb815ea2a18bf51804aa5847cb90df3a2d4c0f9a | 02:56 |
| shogun-notifier- | shogun: linalg-sgvector and sgmatrix-set const | 02:56 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 0b25451 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/0b2545136a109f3b6381a7d7424f20250cda3729 | 02:56 |
| shogun-notifier- | shogun: linalg-sgvector-range_fill | 02:56 |
| OXPHOS | wiking: thanks! | 02:59 |
| -!- travis-ci [~travis-ci@ec2-54-227-23-16.compute-1.amazonaws.com] has joined #shogun | 03:18 | |
| travis-ci | it's OXPHOS's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/154324091 | 03:18 |
| -!- travis-ci [~travis-ci@ec2-54-227-23-16.compute-1.amazonaws.com] has left #shogun [] | 03:18 | |
| @wiking | OXPHOS, ok so just a quick follow up on the issue | 03:43 |
| @wiking | with the rotational matrix | 03:43 |
| @wiking | OXPHOS, we could change a bit the function declaration of that api | 03:44 |
| @wiking | say | 03:44 |
| @wiking | void rotational_matrix(int32_t size, SGMatrix<T>& matrix); | 03:44 |
| @wiking | ? | 03:44 |
| @wiking | that way we wouldnt have any problem to infer things | 03:45 |
| @wiking | or? | 03:45 |
| -!- OXPHOS [4441a916@gateway/web/freenode/ip.68.65.169.22] has quit [Ping timeout: 264 seconds] | 04:25 | |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 05:22 | |
| -!- OXPHOS [4441a916@gateway/web/freenode/ip.68.65.169.22] has joined #shogun | 05:48 | |
| OXPHOS | wiking: yes with SGMatrix<T> in param it can infer | 05:49 |
| OXPHOS | sanuj hey sry cannot do pm for some reason.. | 05:51 |
| sanuj | okay | 05:51 |
| sanuj | OXPHOS, did you submit your work on gsoc website? | 05:52 |
| OXPHOS | sanuj: not yet..close | 05:52 |
| sanuj | i'm submitting it like this | 05:53 |
| sanuj | https://gist.github.com/sanuj/62f576cdaa80ecaa781f78b4b9298de4 | 05:53 |
| sanuj | do you think it's fine? | 05:53 |
| -!- shogun-notifier- [~irker@7nn.de] has quit [Quit: transmission timeout] | 05:56 | |
| OXPHOS | sanuj: I don't know the rules - but I think as long as you have enough PRs it should be fine? | 05:56 |
| sanuj | yeah | 05:57 |
| OXPHOS | sanuj: I checked some report people shared on facebook and they're kinda elabroated. | 05:57 |
| OXPHOS | sanuj: I have one last part left..but it's more or less like this: https://github.com/OXPHOS/shogun/wiki/GSoC-2016-Final-Report---The-Shogun-Detox | 05:57 |
| sanuj | oh wow | 05:58 |
| sanuj | i should improve mine :D | 05:58 |
| @wiking | i wouldn't sweat it so much | 05:59 |
| @wiking | although i dont know how it is now | 05:59 |
| @wiking | back in my time this wasn't so strict of the code submission | 05:59 |
| sanuj | wiking, ohkay | 05:59 |
| @wiking | i mean i would say both are fine | 06:00 |
| @wiking | sanuj: yours is very clean and simple | 06:00 |
| @wiking | OXPHOS: did an essay :) | 06:00 |
| OXPHOS | wiking: :D like README | 06:00 |
| @wiking | :P | 06:01 |
| sanuj | oh, i guess i'll just submit | 06:01 |
| sanuj | i can edit the gist later too | 06:01 |
| sanuj | if required | 06:01 |
| @wiking | indeed | 06:01 |
| OXPHOS | u r right | 06:02 |
| sanuj | OXPHOS, are you back in the US? | 06:02 |
| @wiking | oh man merging all these feature branches is going to be fun :) | 06:03 |
| OXPHOS | sanuj: yes..but in california now. will go back to east coast by the end of this week | 06:03 |
| sanuj | OXPHOS, remember i got an intern at JHU | 06:03 |
| OXPHOS | sanuj: yes! | 06:03 |
| sanuj | those people are taking a lot of time with the paperwork required for me to apply for visa | 06:03 |
| sanuj | it has been almost a month | 06:03 |
| OXPHOS | wiking: I need to revise some stuff based on the tag/plugin change | 06:04 |
| @wiking | that's alright | 06:04 |
| OXPHOS | sanuj: you're running out of time? | 06:04 |
| sanuj | OXPHOS, they told me the delay is due to some US Federal Employment laws that are set to go into place on December 1, 2016 | 06:05 |
| sanuj | i suspect the law is this: https://www.employmentlawwatch.com/2016/05/articles/employment-us/u-s-dol-releases-final-revisions-on-overtime-protections/ | 06:05 |
| sanuj | OXPHOS, you think they might have second thoughts and cancel the internship invitation as they won't be able to fund me with the new law in place? | 06:06 |
| sanuj | because in that case i should start looking for new research internships | 06:06 |
| OXPHOS | sanuj: sorry I had no clue about it..they shouldn't, but who knows..I have a friend who got kicked out of graduate school after 1st year because his P.I. "suddenly run out of money" after taking him | 06:08 |
| OXPHOS | sanuj: so I'll suggest you start looking for new internships..as it's gonna take a while anyway | 06:08 |
| OXPHOS | do they mean they'll start signing the paperwork after Dec 1st...? | 06:09 |
| sanuj | i don't think so | 06:14 |
| sanuj | OXPHOS, the mail said: they need confirmation from the prof about my appointment, after the knowledge of this new law. | 06:15 |
| OXPHOS | sanuj: oh so I guess you can harass the prof for the confirmation letter and see what he thinks? | 06:17 |
| sanuj | OXPHOS, seems like the prof is very busy, people working in the lab did my interview and everything else | 06:18 |
| sanuj | i don't like applying for research interns, most of the profs don't even read my mails :) | 06:19 |
| OXPHOS | sanuj: i got no reply from industry either...I guess it's because of my major but I was applying for bioinfo | 06:20 |
| OXPHOS | sanuj: but you have to e-mail the prof since he decides to take you | 06:20 |
| OXPHOS | sanuj: my experience is they'll blame you if you missed something because you're too "polite" or patient with them XD | 06:21 |
| sanuj | :P | 06:22 |
| sanuj | okay i'll send a mail today | 06:22 |
| OXPHOS | good luck! | 06:22 |
| sanuj | OXPHOS, thanks! :D | 06:22 |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Ping timeout: 264 seconds] | 07:10 | |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 07:56 | |
| Saurabh7 | uhm OXPHOS your link looks broken | 08:17 |
| OXPHOS | Saurabh7: thanks! I changed the title XD https://github.com/OXPHOS/shogun/wiki/GSoC-2016-Final-Report-:-The-Shogun-Detox | 08:33 |
| Saurabh7 | ah isee careful with that :) | 08:34 |
| -!- OXPHOS [4441a916@gateway/web/freenode/ip.68.65.169.22] has quit [Quit: Page closed] | 09:21 | |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Ping timeout: 244 seconds] | 09:26 | |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 10:03 | |
| -!- shogun-notifier- [~irker@7nn.de] has joined #shogun | 10:11 | |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 196eb1e / / (3 files): https://github.com/shogun-toolbox/shogun/commit/196eb1e057cc7faa51643d7657007e2a8b2eeb6a | 10:11 |
| shogun-notifier- | shogun: Remove linalg::dot | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3d5816e / src/shogun/mathematics/linalg/LinalgBackendViennacl.h: https://github.com/shogun-toolbox/shogun/commit/3d5816e813a1a4f6933eb4434e25c03db847fa10 | 10:11 |
| shogun-notifier- | shogun: Linalg_ViennaCL_typecast_helper_method | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 70fdbe7 / tests/unit/mathematics/linalg/operations/Viennacl_operations_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/70fdbe70bf7425d0afb971fc91de9220300f1791 | 10:11 |
| shogun-notifier- | shogun: fix viennacl unittest | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * aac7cdf / src/shogun/mathematics/linalg/ (3 files): https://github.com/shogun-toolbox/shogun/commit/aac7cdf656413173e1927d758247eb366fa7b1e8 | 10:11 |
| shogun-notifier- | shogun: add DEFINE_FOR_ALL_PTYPE macro | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3925825 / src/shogun/ (6 files): https://github.com/shogun-toolbox/shogun/commit/39258250b10772f5dad9eb82bec2c6f4cc943245 | 10:11 |
| shogun-notifier- | shogun: update linalg for SGMatrix compatibility | 10:11 |
| shogun-notifier- | shogun: | 10:11 |
| shogun-notifier- | shogun: - change gpu_vector to gpu_ptr | 10:11 |
| shogun-notifier- | shogun: linalg-sum_no_diag | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 56db07a / src/shogun/mathematics/linalg/ (3 files): https://github.com/shogun-toolbox/shogun/commit/56db07aea37c763b307683f4fd00a80cadd30f8b | 10:11 |
| shogun-notifier- | shogun: add return value/fix msgs/remove white lines | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 2423b14 / / (5 files): https://github.com/shogun-toolbox/shogun/commit/2423b1461ab9c3054fc083fb86e949178d7823ca | 10:11 |
| shogun-notifier- | shogun: linalg-matrix block sum | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 138e3fe / / (6 files): https://github.com/shogun-toolbox/shogun/commit/138e3fe679929beb8a2c0a7fea1a8e8ff9bcf426 | 10:11 |
| shogun-notifier- | shogun: linalg-sgvector-add-inplace | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3892385 / / (6 files): https://github.com/shogun-toolbox/shogun/commit/3892385e1a9b87f42ebe2cc8dd4a570cc1c3e334 | 10:11 |
| shogun-notifier- | shogun: linalg-sgmatrix-add | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 65af379 / / (6 files): https://github.com/shogun-toolbox/shogun/commit/65af379fd729ea5497b8d73211a45e01bdf6641e | 10:11 |
| shogun-notifier- | shogun: linalg-sgvector&sgmatrix-scale | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 3e2c334 / / (7 files): https://github.com/shogun-toolbox/shogun/commit/3e2c334de523c502c288fdcd27d309790669e566 | 10:11 |
| shogun-notifier- | shogun: linalg-sgvector&sgmatrix-max | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 8e481f8 / / (6 files): https://github.com/shogun-toolbox/shogun/commit/8e481f89ec775cc423afd14c55a045464e6d4b38 | 10:11 |
| shogun-notifier- | shogun: linalg-sgvector and sgmatrix-set const | 10:11 |
| shogun-notifier- | shogun: OXPHOS :feature/linalg_refactor * 86708a8 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/86708a8cd12f15783bcb979c25d8a2a0682b5f61 | 10:11 |
| shogun-notifier- | shogun: linalg-sgvector-range_fill | 10:11 |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Ping timeout: 252 seconds] | 10:14 | |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 10:23 | |
| -!- travis-ci [~travis-ci@ec2-54-166-238-133.compute-1.amazonaws.com] has joined #shogun | 10:59 | |
| travis-ci | it's OXPHOS's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/154382001 | 10:59 |
| -!- travis-ci [~travis-ci@ec2-54-166-238-133.compute-1.amazonaws.com] has left #shogun [] | 10:59 | |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Ping timeout: 260 seconds] | 11:01 | |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 11:35 | |
| -!- shogun-notifier- [~irker@7nn.de] has quit [Quit: transmission timeout] | 13:11 | |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Ping timeout: 276 seconds] | 14:03 | |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 14:58 | |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Ping timeout: 252 seconds] | 15:19 | |
| -!- Benni_ [86020a1f@gateway/web/freenode/ip.134.2.10.31] has joined #shogun | 15:31 | |
| Benni_ | Hi can anybody help me with GP-Classification+MKL? More specifically, I'm not sure if the kernelweights have been learned. | 15:33 |
| Saurabh7 | Benni_: use get_subkernel_weights() maybe | 15:55 |
| Benni_ | Im using the VB-inference + gradient based model selection framework (similar to the last chapter in the VB-notebook). However, the subkernel weights are all 1.0 before and after model selection (Im using 3 subkernels). Im not sure whether I have to explicitly specify the kernel weights as hyperparameters, or if they are autodetected and optimized during model selection. If I have to explicitly specify the weights, how do I do this (in | 16:24 |
| -!- sanuj [~sanuj@61.0.30.72] has joined #shogun | 17:33 | |
| -!- Benni_ [86020a1f@gateway/web/freenode/ip.134.2.10.31] has quit [Quit: Page closed] | 17:38 | |
| -!- Hieronymous [~sudarshan@122.169.149.6] has joined #shogun | 17:44 | |
| -!- Hieronymous [~sudarshan@122.169.149.6] has quit [Quit: Leaving] | 18:53 | |
| -!- sanuj [~sanuj@61.0.30.72] has quit [Remote host closed the connection] | 19:49 | |
| --- Log closed Wed Aug 24 00:00:19 2016 | ||
Generated by irclog2html.py 2.10.0 by Marius Gedminas - find it at mg.pov.lt!