IRC logs of #shogun for Thursday, 2016-09-08

--- Log opened Thu Sep 08 00:00:40 2016
ConfusedGrammerAnybody free to help with a hsogun error?01:10
ConfusedGrammer   Unfortunately, this didnt work. I am using the instruction "g++ -std=c++11 -DHAVE_EIGEN3 classifier_gaussian_process_binary_classification.cpp -o classgp -lshogun" in an attempt to compile the example within the examples folder and am getting a laundry left of undefined references. I set each of the g++ include search variables to the /usr/local/include folder within which shogun stored its include folder after installa01:11
ConfusedGrammerhttp://stackoverflow.com/questions/38294970/undefined-reference-to-shogunsgrefobjectunref-when-compiling-with-so-o01:11
lisitsynConfusedGrammer: hey01:13
lisitsynyou have to be sure libshogun.so is in your LD_LIBRARY_PATH01:14
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CaBahi there13:56
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CaBawiking: did you still figure anything with the clone() issue?14:26
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ConfusedGrammerAnyone available for assistance?16:57
ConfusedGrammerStill havnt gotten a solution to my problem16:57
ConfusedGrammerhttp://stackoverflow.com/questions/38294970/undefined-reference-to-shogunsgrefobjectunref-when-compiling-with-so-o16:58
ConfusedGrammer(Comment underneath proposed solution gives my current status)16:58
ConfusedGrammerTo reiterate, my status is such:16:59
ConfusedGrammer1. Using command "g++ -std=c++11 -DHAVE_EIGEN3 classifier_gaussian_process_binary_classification.cpp -o classgp -lshogun" to compile command16:59
ConfusedGrammer2. Following .bashrc setup:17:00
ConfusedGrammerexport SO=/home/o-4/Downloads/shogun-4.1.0/build/src/shogun/libshogun.so.17 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/o-4/Downloads/shogun-4.1.0/build/src/shogun export PATH=/home/o-4/anaconda2/bin:$PATH export CPATH=/usr/local/include  export C_INCLUDE_PATH=$C_INCLUDE_PATH:/usr/local/include export CPLUS_INCLUDE_PATH=$CPLUS_INCLUDE_PATH:/usr/local/include17:01
ConfusedGrammer3. I have installed eigen3 via apt-get: "apt-get install libeigen3-dev"17:02
ConfusedGrammer4. I have checked to confirm that the missing dependancies given by shogun exists within the include path i set up in .bashrc, they sit within /usr/local/include, which I added to the environment (see 2)17:03
ConfusedGrammer5. I checked the shogun libraries for the missing dependances with "nm -D libshogun.so (then version number, ive checked them all) | grep (pattern with some part of dependancy) | less"17:07
ConfusedGrammerand i have been having trouble finding strings matching the missing dependancies, which suggests the dependancies might not have been installed in the .so object17:07
ConfusedGrammerBut I don't understand why that could be17:07
ConfusedGrammerI followed the instructions given for installation on the shogun site17:08
ConfusedGrammerIs this the cause or is there something else? Could really use help on this, thanks in advance.17:08
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ConfusedGrammerAny devs happen to be hanging around?22:19
ConfusedGrammerStill looking for assistance with the previously mentioned issue22:19
ConfusedGrammerTo reiterate, my status is such:16:59 ConfusedGrammer1. Using command "g++ -std=c++11 -DHAVE_EIGEN3 classifier_gaussian_process_binary_classification.cpp -o classgp -lshogun" to compile command16:59 ConfusedGrammer2. Following .bashrc setup:17:00 ConfusedGrammerexport SO=/home/o-4/Downloads/shogun-4.1.0/build/src/shogun/libshogun.so.17 export LD_LIBRARY_PATH=LDLIBRARYPATH:/home/o−4/Downloads/shogun−4.1.0/build/src/22:19
ConfusedGrammer(copied from log file)(22:20
--- Log closed Fri Sep 09 00:00:41 2016

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