IRC logs of #shogun for Tuesday, 2018-03-13

--- Log opened Tue Mar 13 00:00:39 2018
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travis-ciit's syashakash's turn to pay the next round of drinks for the massacre he caused in syashakash/shogun: https://travis-ci.org/syashakash/shogun/builds/35256743400:25
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@sukey[https://github.com/shogun-toolbox/shogun] Issue https://github.com/shogun-toolbox/shogun/issues/4204 opened by FaroukY07:22
@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/4168 synchronized by syashakash08:09
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travis-ciit's syashakash's turn to pay the next round of drinks for the massacre he caused in syashakash/shogun: https://travis-ci.org/syashakash/shogun/builds/35270158209:20
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travis-ciit's syashakash's turn to pay the next round of drinks for the massacre he caused in syashakash/shogun: https://travis-ci.org/syashakash/shogun/builds/35270158209:34
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lisitsynHeikoS: tests hit the time limit, do you think we should merge the clone thing?12:14
@wikingharakiri12:22
@wikingnobunaga12:22
@wikingTrixis, y012:22
lisitsynwiking: ^ merge or not merge12:39
lisitsyn:P12:39
@wikingnyancat12:45
@wikinglemme see but i guess yes12:45
@wikingreset!12:45
@wiking:)12:45
@wikingsg_memcphy12:46
@wikingwe have a wrapper12:47
@wiking:)12:47
lisitsynwiking: uhmm I don't copy memory12:49
lisitsynwiking: it also calls the assignment thing12:50
lisitsynin case it is non-trivial12:50
@wikingstd::copy?12:50
lisitsynyes12:50
@wikingor it's just an element wise12:50
lisitsynI mean if it is something with operator=12:50
@wikingcopy12:50
lisitsynyes12:50
@wikingmmmm12:50
lisitsynwell our supposed use-case12:51
lisitsynis actually trivial pod12:51
lisitsynlike float* etc12:51
lisitsynbut who knows :P12:51
@wiking:)12:51
@wikingkk12:51
lisitsynI don't mind to change, but just explaining my intention12:51
@wikingkill it12:51
@wikingwith fire12:51
@wiking:)12:51
lisitsynwiking: we desperately need to raise the limit for travis12:53
lisitsyn:(12:53
lisitsynHeikoS: could you try reaching travis for a raise of that limit?12:54
lisitsynwe need like 1h 10m I guess12:55
lisitsynnot that much of improvement12:55
@HeikoSI can ask them, not sure whether it is possible12:55
@HeikoSlisitsyn: wanna try it?\12:58
lisitsynHeikoS: try what?12:59
@HeikoSasking travis12:59
lisitsynHeikoS: I think mlpack guys asked12:59
lisitsynIIRC12:59
@HeikoSyeah I think i remember12:59
@HeikoSwanna appriach them? :)13:00
lisitsynI could13:00
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@wikingwuwei, hey13:24
wuweihey13:25
wuweii realize some issue with immutable features. if we need to modify features, we have to obtain sth like feature matrix, and then create a new feature13:26
wuweiwhich means we should expose underlying data types to algorithms13:26
@wikingmmm13:26
@wikingthat would be scary13:27
@wikingwuwei, do yo uhave a sketch of the design you had in mind13:27
@wikingon the .h level?13:27
@wikingwe could iterate about that in a gist13:27
wuweii've come up some steps, but need more iterations13:28
@wikingi mean i wouldn't go into coding anything13:28
@wikingbefore having a solid design13:28
wuweiyeah, the problem is, after checking the existing PR, i think there are more details to be considered13:30
wuweifor example, the on-the-fly preprocessor, breaks many tests13:30
wuweibecause algorithms mutate on temporary (preprocessed) data13:31
@wikingyeah14:02
@wikingdont worry about the tests14:02
@wikingfor the time being14:02
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@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/4203 merged by lisitsyn14:09
@sukey[https://github.com/shogun-toolbox/shogun] New commit https://github.com/shogun-toolbox/shogun/commit/08d6199f9ef00611612c0e60e866abb4db95ca3e by lisitsyn14:09
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@wikinglisitsyn HeikoS i'm gonna drop all the templated (format based, i.e. json,xml ascii) serialization unit tests as currently we cannot get the gcc job to finish on time on travis14:49
@wikingmmmm14:49
@wikingbtw14:50
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@sukey[https://github.com/shogun-toolbox/shogun] New commit https://github.com/shogun-toolbox/shogun/commit/97ad9c49890498695baf1fa5ef6ce0572b7f2ba2 by vigsterkr14:53
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shogitter(vigsterkr) geektoni here by any chance?15:01
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travis-ciit's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/35282928415:23
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travis-ciit's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/35282928415:49
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shogitter(geektoni) wiking: half-here ;)15:51
@wikinggeektoni could you look at the issue comments when u got the time plz15:51
@wikingthnx15:51
shogitter(geektoni) already done. I will send a patch later this evening.15:53
@wikingthnx15:54
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travis-ciit's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/35284784516:12
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travis-ciit's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/35284784517:12
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@wikingsonney2k_, https://tech.slashdot.org/story/18/03/13/1623251/firefox-59-by-far-the-biggest-update-since-firefox-10-arrives-with-faster-page-loads-and-improved-private-browsing :)18:15
@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/416818:51
@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/4205 opened by geektoni20:16
@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/420520:17
Trixiswiking: hey20:41
Trixiswiking: sorry i was presenting on an event the whole day20:41
@wikingkk no worries20:58
@wikinggsoc?20:58
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@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/4205 merged by vigsterkr22:12
@sukey[https://github.com/shogun-toolbox/shogun] New commit https://github.com/shogun-toolbox/shogun/commit/499d189e61945fa7f537c096922c68b4bae5330c by vigsterkr22:12
Trixiswiking: oh yeah,  the applications are open now. Sorry last few weeks have been a bit of a hell22:14
@wikingTrixis, yep indeed it has just opened yesterday22:15
Trixiswiking: how much of an issue is it if im gone for 2weeks in july? I have an invitation to London Mathematical Society UG Summer School.22:21
@wikingno22:21
@wikingjust let us know22:21
@wikingin your schedule22:21
Trixisah good (declining that one would be a slight career suicide)22:21
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shogitter(vigsterkr) geektoni here?22:32
shogitter(geektoni) wiking here22:33
shogitter(vigsterkr) geektoni check your private gitter msg22:35
Trixiswiking: hmm you mention real life applications aspect on gsoc page22:35
@wikingTrixis, indeed22:35
Trixiscan you elaborate on that one?22:36
@wikingwell that one is free choice22:36
@wikingjust needs to reasonable22:36
@wikingand cool22:36
@wiking:D22:36
Trixisim thinking some biological applications22:36
Trixisi mean epigenomics is one that comes immediately to mind22:37
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Trixissmall molecules are fun but with those its a bit of a gamble always what results will you get22:37
FaroukHi Everyone. I Just wrote a Cookbook but when I ``make meta_examples``, the .py is not generated for some reason. At first, I thought it was a syntax error in my .sg file, but then I just copied another .sg file (From the ones working) and for some reason its still not generating the .py file, any ideas?22:39
@wikingcookbook?22:40
Faroukdoc/cookbook/source/examples/*22:41
@wikingah ok22:43
@wikingso the problem is22:43
@wikingthat you ahve to rerun22:43
@wikingcmake22:43
@wikingimo22:43
FaroukThe .rst file is in doc/cookbook/source/examples/evaluation/*   and the .sg file is in examples/meta/src/evaluation22:43
@wikingas cmake needs to detect22:43
FaroukOhh, wait let me try22:43
@wikingthe files22:43
Trixiswiking: when i say epigenomics i mean mostly kernel methods in context thereof22:44
FaroukOhh great! It works now. Thanks !22:51
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travis-ciit's Giovanni De Toni's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/35305604723:03
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@sukey[https://github.com/shogun-toolbox/shogun] Pull Request https://github.com/shogun-toolbox/shogun/pull/4206 opened by FaroukY23:20
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travis-ciit's Giovanni De Toni's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: https://travis-ci.org/shogun-toolbox/shogun/builds/35305604723:25
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--- Log closed Wed Mar 14 00:00:40 2018

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