Detailed Description

UI features.

Definition at line 36 of file GUIFeatures.h.

Inheritance diagram for CGUIFeatures:

Public Member Functions
	CGUIFeatures ()
	CGUIFeatures (CSGInterface *interface)
	~CGUIFeatures ()
CFeatures *	get_train_features ()
CFeatures *	get_test_features ()
bool	set_train_features (CFeatures *f)
bool	set_test_features (CFeatures *f)
void	add_train_features (CFeatures *f)
void	add_test_features (CFeatures *f)
void	add_train_dotfeatures (CDotFeatures *f)
void	add_test_dotfeatures (CDotFeatures *f)
bool	del_last_feature_obj (char *target)
void	invalidate_train ()
void	invalidate_test ()
bool	load (char filename, char fclass, char type, char target, int32_t size, int32_t comp_features)
bool	save (char filename, char type, char *target)
bool	clean (char *target)
bool	reshape (char *target, int32_t num_feat, int32_t num_vec)
CFeatures *	get_convert_features (char *target)
bool	set_convert_features (CFeatures features, char target)
CSparseFeatures< float64_t > *	convert_simple_real_to_sparse_real (CSimpleFeatures< float64_t > *src)
CStringFeatures< char > *	convert_simple_char_to_string_char (CSimpleFeatures< char > *src)
CSimpleFeatures< float64_t > *	convert_simple_char_to_simple_align (CSimpleFeatures< char > *src, float64_t gap_cost=0)
CSimpleFeatures< float64_t > *	convert_simple_word_to_simple_salzberg (CSimpleFeatures< uint16_t > *src)
CTOPFeatures *	convert_string_word_to_simple_top (CStringFeatures< uint16_t > *src)
CFKFeatures *	convert_string_word_to_simple_fk (CStringFeatures< uint16_t > *src)
CSimpleFeatures< float64_t > *	convert_sparse_real_to_simple_real (CSparseFeatures< float64_t > *src)
CExplicitSpecFeatures *	convert_string_byte_to_spec_word (CStringFeatures< uint16_t > *src, bool use_norm)
template<class CT , class ST >
CStringFeatures< ST > *	convert_string_char_to_string_generic (CStringFeatures< CT > src, int32_t order=1, int32_t start=0, int32_t gap=0, char rev='f', CAlphabet alpha=NULL)
bool	set_reference_features (char *target)
virtual const char *	get_name () const
Protected Attributes
CSGInterface *	ui
CFeatures *	train_features
CFeatures *	test_features
CFeatures *	ref_features

Constructor & Destructor Documentation

CGUIFeatures ( )

constructor

Definition at line 47 of file GUIFeatures.h.

CGUIFeatures ( CSGInterface * interface )

constructor

Parameters:

interface

Definition at line 21 of file GUIFeatures.cpp.

~CGUIFeatures ( )

destructor

Definition at line 27 of file GUIFeatures.cpp.

Member Function Documentation

void add_test_dotfeatures ( CDotFeatures * f )

add test dotfeatures

Parameters:

f

Definition at line 615 of file GUIFeatures.cpp.

void add_test_features ( CFeatures * f )

add test features

Parameters:

f

Definition at line 646 of file GUIFeatures.cpp.

void add_train_dotfeatures ( CDotFeatures * f )

add train dotfeatures

Parameters:

f

Definition at line 583 of file GUIFeatures.cpp.

void add_train_features ( CFeatures * f )

add train features

Parameters:

f

Definition at line 555 of file GUIFeatures.cpp.

bool clean ( char * target )

clean/r features

Definition at line 204 of file GUIFeatures.cpp.

CSimpleFeatures< float64_t > * convert_simple_char_to_simple_align	(	CSimpleFeatures< char > *	src,
		float64_t	gap_cost = `0`
	)

convert simple char to simple align

Parameters:

	src
	gap_cost

Definition at line 506 of file GUIFeatures.cpp.

CStringFeatures< char > * convert_simple_char_to_string_char ( CSimpleFeatures< char > * src )

converst simple char to string char

Parameters:

src

Definition at line 322 of file GUIFeatures.cpp.

CSparseFeatures< float64_t > * convert_simple_real_to_sparse_real ( CSimpleFeatures< float64_t > * src )

convert features from one class/type to another

Parameters:

src

Definition at line 298 of file GUIFeatures.cpp.

CSimpleFeatures< float64_t > * convert_simple_word_to_simple_salzberg ( CSimpleFeatures< uint16_t > * src )

convert simple word to simple salzberg

Parameters:

src

Definition at line 364 of file GUIFeatures.cpp.

CSimpleFeatures< float64_t > * convert_sparse_real_to_simple_real ( CSparseFeatures< float64_t > * src )

convert sparse real to simple real

Parameters:

src

Definition at line 477 of file GUIFeatures.cpp.

CExplicitSpecFeatures * convert_string_byte_to_spec_word	(	CStringFeatures< uint16_t > *	src,
		bool	use_norm
	)

convert string byte to spec word

Parameters:

	src
	use_norm

Definition at line 500 of file GUIFeatures.cpp.

CStringFeatures<ST>* convert_string_char_to_string_generic	(	CStringFeatures< CT > *	src,
		int32_t	order = `1`,
		int32_t	start = `0`,
		int32_t	gap = `0`,
		char	rev = `'f'`,
		CAlphabet *	alpha = `NULL`
	)

convert string char to string generic

Parameters:

	src
	order
	start
	gap
	rev
	alpha

Definition at line 179 of file GUIFeatures.h.

CFKFeatures * convert_string_word_to_simple_fk ( CStringFeatures< uint16_t > * src )

convert string word to simple fk

Parameters:

src

Definition at line 439 of file GUIFeatures.cpp.

CTOPFeatures * convert_string_word_to_simple_top ( CStringFeatures< uint16_t > * src )

convert string word to simple top

Parameters:

src

Definition at line 406 of file GUIFeatures.cpp.

bool del_last_feature_obj ( char * target )

delete last feature obj from combined features

Definition at line 674 of file GUIFeatures.cpp.

CFeatures * get_convert_features ( char * target )

get features for target to convert

Definition at line 249 of file GUIFeatures.cpp.

virtual const char* get_name ( ) const [virtual]

Returns:: object name

Implements CSGObject.

Definition at line 224 of file GUIFeatures.h.

CFeatures* get_test_features ( )

get test features

Definition at line 58 of file GUIFeatures.h.

CFeatures* get_train_features ( )

get train features

Definition at line 56 of file GUIFeatures.h.

void invalidate_test ( )

invalidate test

Definition at line 41 of file GUIFeatures.cpp.

void invalidate_train ( )

invalidate train

Definition at line 34 of file GUIFeatures.cpp.

bool load	(	char *	filename,
		char *	fclass,
		char *	type,
		char *	target,
		int32_t	size,
		int32_t	comp_features
	)

load features from file

FIXME make CHAR type configurable... it is DNA by default

Definition at line 48 of file GUIFeatures.cpp.

bool reshape	(	char *	target,
		int32_t	num_feat,
		int32_t	num_vec
	)

reshape target feature matrix

Definition at line 216 of file GUIFeatures.cpp.

bool save	(	char *	filename,
		char *	type,
		char *	target
	)

save features to file

Definition at line 141 of file GUIFeatures.cpp.

bool set_convert_features	(	CFeatures *	features,
		char *	target
	)

set convert(ed) features for target

Definition at line 266 of file GUIFeatures.cpp.

bool set_reference_features ( char * target )

set reference features from target

Definition at line 533 of file GUIFeatures.cpp.

bool set_test_features ( CFeatures * f )

set test features

Parameters:

f

Definition at line 75 of file GUIFeatures.h.

bool set_train_features ( CFeatures * f )

set train features

Parameters:

f

Definition at line 63 of file GUIFeatures.h.

Member Data Documentation

CFeatures* ref_features [protected]

ref features

Definition at line 234 of file GUIFeatures.h.

CFeatures* test_features [protected]

test features

Definition at line 232 of file GUIFeatures.h.

CFeatures* train_features [protected]

train features

Definition at line 230 of file GUIFeatures.h.

CSGInterface* ui [protected]

ui

Definition at line 228 of file GUIFeatures.h.

The documentation for this class was generated from the following files:

CGUIFeatures Class Reference

Detailed Description

Public Member Functions

Protected Attributes

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation