Detailed Description

UI structure.

Definition at line 28 of file GUIStructure.h.

Inheritance diagram for CGUIStructure:

Public Member Functions
	CGUIStructure ()
	CGUIStructure (CSGInterface *interface)
	~CGUIStructure ()
bool	set_dyn_prog (CDynProg *h)
CDynProg *	get_dyn_prog ()
float64_t *	get_feature_matrix (bool copy)
CSparseFeatures< float64_t > *	get_feature_matrix_sparse (int32_t index)
bool	set_feature_matrix (float64_t feat, int32_t dims)
bool	set_feature_matrix_sparse (SGSparseVector< float64_t > f1, SGSparseVector< float64_t > f2, int32_t *dims)
bool	set_feature_dims (int32_t *dims)
int32_t *	get_feature_dims ()
bool	set_all_pos (int32_t *pos, int32_t Npos)
int32_t *	get_all_positions ()
int32_t	get_num_positions ()
bool	set_content_svm_weights (float64_t *weights, int32_t Nweights, int32_t Mweights)
float64_t *	get_content_svm_weights ()
int32_t	get_num_svm_weights ()
CPlifMatrix *	get_plif_matrix ()
bool	set_orf_info (int32_t *orf_info, int32_t Norf_info, int32_t Morf_info)
int32_t *	get_orf_info ()
bool	set_use_orf (bool use_orf)
bool	get_use_orf ()
bool	set_mod_words (int32_t *mod_words, int32_t Nmod_words, int32_t Mmod_words)
int32_t *	get_mod_words ()
int32_t	get_num_states ()
bool	set_num_states (int32_t num)
bool	cleanup ()
virtual const char *	get_name () const
Protected Attributes
CSGInterface *	ui
int32_t	m_num_plifs
int32_t	m_num_limits
int32_t	m_num_states
CDynProg *	m_dp
float64_t *	m_feature_matrix
CSparseFeatures< float64_t > *	m_feature_matrix_sparse1
CSparseFeatures< float64_t > *	m_feature_matrix_sparse2
int32_t *	m_feature_dims
int32_t	m_num_positions
int32_t *	m_all_positions
float64_t *	m_content_svm_weights
int32_t	m_num_svm_weights
int32_t *	m_orf_info
bool	m_use_orf
int32_t *	m_mod_words
CPlifMatrix *	m_plif_matrix

Constructor & Destructor Documentation

CGUIStructure ( )

constructor

Definition at line 32 of file GUIStructure.h.

CGUIStructure ( CSGInterface * interface )

constructor

Parameters:

interface

Definition at line 20 of file GUIStructure.cpp.

~CGUIStructure ( )

destructor

Definition at line 31 of file GUIStructure.cpp.

Member Function Documentation

bool cleanup ( )

cleanup

Definition at line 234 of file GUIStructure.h.

int32_t* get_all_positions ( )

get all positions

Definition at line 144 of file GUIStructure.h.

float64_t* get_content_svm_weights ( )

get content svm weights

Definition at line 166 of file GUIStructure.h.

CDynProg* get_dyn_prog ( )

get dyn prog

Definition at line 51 of file GUIStructure.h.

int32_t* get_feature_dims ( )

get feature dims

Definition at line 127 of file GUIStructure.h.

float64_t* get_feature_matrix ( bool copy )

get feature matrix

Parameters:

copy

Definition at line 61 of file GUIStructure.h.

CSparseFeatures<float64_t>* get_feature_matrix_sparse ( int32_t index )

get feature matrix sparse

Parameters:

index

Definition at line 77 of file GUIStructure.h.

int32_t* get_mod_words ( )

get mod words

Definition at line 222 of file GUIStructure.h.

virtual const char* get_name ( ) const [virtual]

Returns:: object name

Implements CSGObject.

Definition at line 251 of file GUIStructure.h.

int32_t get_num_positions ( )

get num positions

Definition at line 146 of file GUIStructure.h.

int32_t get_num_states ( )

get num states

Definition at line 224 of file GUIStructure.h.

int32_t get_num_svm_weights ( )

get num svm weights

Definition at line 168 of file GUIStructure.h.

int32_t* get_orf_info ( )

get orf info

Definition at line 190 of file GUIStructure.h.

CPlifMatrix* get_plif_matrix ( )

get plif matrix

Definition at line 171 of file GUIStructure.h.

bool get_use_orf ( )

get use orf

Definition at line 204 of file GUIStructure.h.

bool set_all_pos	(	int32_t *	pos,
		int32_t	Npos
	)

set all pos

Parameters:

	pos
	Npos

Definition at line 133 of file GUIStructure.h.

bool set_content_svm_weights	(	float64_t *	weights,
		int32_t	Nweights,
		int32_t	Mweights
	)

set content svm weights

Parameters:

	weights
	Nweights
	Mweights

Definition at line 153 of file GUIStructure.h.

bool set_dyn_prog ( CDynProg * h )

set dyn prog

Parameters:

h

Definition at line 43 of file GUIStructure.h.

bool set_feature_dims ( int32_t * dims )

set feature dims

Parameters:

dims

Definition at line 119 of file GUIStructure.h.

bool set_feature_matrix	(	float64_t *	feat,
		int32_t *	dims
	)

set feature matrix

Parameters:

	feat
	dims

Definition at line 91 of file GUIStructure.h.

bool set_feature_matrix_sparse	(	SGSparseVector< float64_t > *	f1,
		SGSparseVector< float64_t > *	f2,
		int32_t *	dims
	)

set feature matrix sparse

Parameters:

	f1
	f2
	dims

Definition at line 105 of file GUIStructure.h.

bool set_mod_words	(	int32_t *	mod_words,
		int32_t	Nmod_words,
		int32_t	Mmod_words
	)

set mod words

Parameters:

	mod_words
	Nmod_words
	Mmod_words

Definition at line 211 of file GUIStructure.h.

bool set_num_states ( int32_t num )

set num states

Parameters:

num

Definition at line 228 of file GUIStructure.h.

bool set_orf_info	(	int32_t *	orf_info,
		int32_t	Norf_info,
		int32_t	Morf_info
	)

set orf info

Parameters:

	orf_info
	Norf_info
	Morf_info

Definition at line 178 of file GUIStructure.h.

bool set_use_orf ( bool use_orf )

set use orf

Parameters:

use_orf

Definition at line 198 of file GUIStructure.h.

Member Data Documentation

int32_t* m_all_positions [protected]

all positions

Definition at line 275 of file GUIStructure.h.

float64_t* m_content_svm_weights [protected]

content svm weights

Definition at line 277 of file GUIStructure.h.

CDynProg* m_dp [protected]

dp

Definition at line 263 of file GUIStructure.h.

int32_t* m_feature_dims [protected]

feature dims

Definition at line 271 of file GUIStructure.h.

float64_t* m_feature_matrix [protected]

feature matrix

Definition at line 265 of file GUIStructure.h.

CSparseFeatures<float64_t>* m_feature_matrix_sparse1 [protected]

feature matrix sparse 1

Definition at line 267 of file GUIStructure.h.

CSparseFeatures<float64_t>* m_feature_matrix_sparse2 [protected]

feature matrix sparse 2

Definition at line 269 of file GUIStructure.h.

int32_t* m_mod_words [protected]

mod words

Definition at line 285 of file GUIStructure.h.

int32_t m_num_limits [protected]

num limits

Definition at line 259 of file GUIStructure.h.

int32_t m_num_plifs [protected]

num plifs

Definition at line 257 of file GUIStructure.h.

int32_t m_num_positions [protected]

num positions

Definition at line 273 of file GUIStructure.h.

int32_t m_num_states [protected]

num states

Definition at line 261 of file GUIStructure.h.

int32_t m_num_svm_weights [protected]

num svm weights

Definition at line 279 of file GUIStructure.h.

int32_t* m_orf_info [protected]

orf info

Definition at line 281 of file GUIStructure.h.

CPlifMatrix* m_plif_matrix [protected]

plif matrix

Definition at line 287 of file GUIStructure.h.

bool m_use_orf [protected]

use orf

Definition at line 283 of file GUIStructure.h.

CSGInterface* ui [protected]

ui

Definition at line 255 of file GUIStructure.h.

The documentation for this class was generated from the following files:

CGUIStructure Class Reference

Detailed Description

Public Member Functions

Protected Attributes

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation