SHOGUN
v3.0.0
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UI classifier.
Definition at line 24 of file GUIClassifier.h.
Public Member Functions | |
CGUIClassifier () | |
CGUIClassifier (CSGInterface *interface) | |
~CGUIClassifier () | |
bool | new_classifier (char *name, int32_t d=6, int32_t from_d=40) |
bool | set_max_train_time (float64_t max) |
bool | load (char *filename, char *type) |
bool | save (char *param) |
CLabels * | classify () |
CLabels * | classify_kernelmachine () |
CLabels * | classify_distancemachine () |
CLabels * | classify_linear () |
CLabels * | classify_byte_linear () |
bool | classify_example (int32_t idx, float64_t &result) |
CMachine * | get_classifier () |
bool | get_trained_classifier (float64_t *&weights, int32_t &rows, int32_t &cols, float64_t *&bias, int32_t &brows, int32_t &bcols, int32_t idx=-1) |
int32_t | get_num_svms () |
bool | get_svm (float64_t *&weights, int32_t &rows, int32_t &cols, float64_t *&bias, int32_t &brows, int32_t &bcols, int32_t idx=-1) |
bool | get_linear (float64_t *&weights, int32_t &rows, int32_t &cols, float64_t *&bias, int32_t &brows, int32_t &bcols) |
bool | get_clustering (float64_t *&weights, int32_t &rows, int32_t &cols, float64_t *&bias, int32_t &brows, int32_t &bcols) |
bool | set_perceptron_parameters (float64_t lernrate, int32_t maxiter) |
bool | set_svm_C (float64_t C1, float64_t C2) |
bool | set_svm_bufsize (int32_t bufsize) |
bool | set_svm_qpsize (int32_t qpsize) |
bool | set_svm_max_qpsize (int32_t max_qpsize) |
bool | set_svm_shrinking_enabled (bool enabled) |
bool | set_svm_nu (float64_t nu) |
bool | set_svm_batch_computation_enabled (bool enabled) |
bool | set_do_auc_maximization (bool do_auc) |
bool | set_svm_linadd_enabled (bool enabled) |
bool | set_svm_bias_enabled (bool enabled) |
bool | set_mkl_interleaved_enabled (bool enabled) |
bool | set_svm_epsilon (float64_t epsilon) |
bool | set_svr_tube_epsilon (float64_t tube_epsilon) |
bool | set_svm_mkl_parameters (float64_t weight_epsilon, float64_t C_mkl, float64_t mkl_norm) |
bool | set_mkl_block_norm (float64_t mkl_bnorm) |
bool | set_elasticnet_lambda (float64_t lambda) |
bool | set_svm_precompute_enabled (int32_t precompute) |
bool | set_krr_tau (float64_t tau=1) |
bool | set_solver (char *solver) |
bool | set_constraint_generator (char *cg) |
bool | train_mkl_multiclass () |
bool | train_mkl () |
bool | train_svm () |
bool | train_knn (int32_t k=3) |
bool | train_krr () |
bool | train_clustering (int32_t k=3, int32_t max_iter=1000) |
bool | train_linear (float64_t gamma=0) |
bool | train_sparse_linear () |
bool | train_wdocas () |
virtual const char * | get_name () const |
virtual CSGObject * | shallow_copy () const |
virtual CSGObject * | deep_copy () const |
virtual bool | is_generic (EPrimitiveType *generic) const |
template<class T > | |
void | set_generic () |
void | unset_generic () |
virtual void | print_serializable (const char *prefix="") |
virtual bool | save_serializable (CSerializableFile *file, const char *prefix="", int32_t param_version=Version::get_version_parameter()) |
virtual bool | load_serializable (CSerializableFile *file, const char *prefix="", int32_t param_version=Version::get_version_parameter()) |
DynArray< TParameter * > * | load_file_parameters (const SGParamInfo *param_info, int32_t file_version, CSerializableFile *file, const char *prefix="") |
DynArray< TParameter * > * | load_all_file_parameters (int32_t file_version, int32_t current_version, CSerializableFile *file, const char *prefix="") |
void | map_parameters (DynArray< TParameter * > *param_base, int32_t &base_version, DynArray< const SGParamInfo * > *target_param_infos) |
void | set_global_io (SGIO *io) |
SGIO * | get_global_io () |
void | set_global_parallel (Parallel *parallel) |
Parallel * | get_global_parallel () |
void | set_global_version (Version *version) |
Version * | get_global_version () |
SGStringList< char > | get_modelsel_names () |
void | print_modsel_params () |
char * | get_modsel_param_descr (const char *param_name) |
index_t | get_modsel_param_index (const char *param_name) |
void | build_gradient_parameter_dictionary (CMap< TParameter *, CSGObject * > *dict) |
virtual bool | update_parameter_hash () |
virtual bool | equals (CSGObject *other, float64_t accuracy=0.0) |
virtual CSGObject * | clone () |
Public Attributes | |
SGIO * | io |
Parallel * | parallel |
Version * | version |
Parameter * | m_parameters |
Parameter * | m_model_selection_parameters |
Parameter * | m_gradient_parameters |
ParameterMap * | m_parameter_map |
uint32_t | m_hash |
Protected Member Functions | |
virtual TParameter * | migrate (DynArray< TParameter * > *param_base, const SGParamInfo *target) |
virtual void | one_to_one_migration_prepare (DynArray< TParameter * > *param_base, const SGParamInfo *target, TParameter *&replacement, TParameter *&to_migrate, char *old_name=NULL) |
virtual void | load_serializable_pre () throw (ShogunException) |
virtual void | load_serializable_post () throw (ShogunException) |
virtual void | save_serializable_pre () throw (ShogunException) |
virtual void | save_serializable_post () throw (ShogunException) |
Protected Attributes | |
CSGInterface * | ui |
CMachine * | classifier |
float64_t | max_train_time |
float64_t | perceptron_learnrate |
int32_t | perceptron_maxiter |
int32_t | svm_qpsize |
int32_t | svm_bufsize |
int32_t | svm_max_qpsize |
float64_t | mkl_norm |
float64_t | mkl_block_norm |
float64_t | ent_lambda |
float64_t | svm_weight_epsilon |
float64_t | svm_epsilon |
float64_t | svm_tube_epsilon |
float64_t | svm_nu |
float64_t | svm_C1 |
float64_t | svm_C2 |
float64_t | C_mkl |
float64_t | krr_tau |
bool | mkl_use_interleaved |
bool | svm_use_bias |
bool | svm_use_batch_computation |
bool | svm_use_linadd |
bool | svm_use_precompute |
bool | svm_use_precompute_subkernel |
bool | svm_use_precompute_subkernel_light |
bool | svm_use_shrinking |
bool | svm_do_auc_maximization |
CSVM * | constraint_generator |
ESolverType | solver_type |
CGUIClassifier | ( | ) |
constructor
Definition at line 28 of file GUIClassifier.h.
CGUIClassifier | ( | CSGInterface * | interface | ) |
~CGUIClassifier | ( | ) |
destructor
Definition at line 108 of file GUIClassifier.cpp.
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inherited |
Builds a dictionary of all parameters in SGObject as well of those of SGObjects that are parameters of this object. Dictionary maps parameters to the objects that own them.
dict | dictionary of parameters to be built. |
Definition at line 1196 of file SGObject.cpp.
CLabels * classify | ( | ) |
classify
Definition at line 1092 of file GUIClassifier.cpp.
CLabels * classify_byte_linear | ( | ) |
classify byte linear
Definition at line 1426 of file GUIClassifier.cpp.
CLabels * classify_distancemachine | ( | ) |
classify distance machine
Definition at line 1364 of file GUIClassifier.cpp.
bool classify_example | ( | int32_t | idx, |
float64_t & | result | ||
) |
CLabels * classify_kernelmachine | ( | ) |
classify kernel machine
Definition at line 1140 of file GUIClassifier.cpp.
CLabels * classify_linear | ( | ) |
classify linear
Definition at line 1401 of file GUIClassifier.cpp.
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virtualinherited |
Creates a clone of the current object. This is done via recursively traversing all parameters, which corresponds to a deep copy. Calling equals on the cloned object always returns true although none of the memory of both objects overlaps.
Definition at line 1313 of file SGObject.cpp.
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virtualinherited |
A deep copy. All the instance variables will also be copied.
Definition at line 160 of file SGObject.h.
Recursively compares the current SGObject to another one. Compares all registered numerical parameters, recursion upon complex (SGObject) parameters. Does not compare pointers!
May be overwritten but please do with care! Should not be necessary in most cases.
other | object to compare with |
accuracy | accuracy to use for comparison (optional) |
Definition at line 1217 of file SGObject.cpp.
CMachine* get_classifier | ( | ) |
get classifier
Definition at line 62 of file GUIClassifier.h.
bool get_clustering | ( | float64_t *& | weights, |
int32_t & | rows, | ||
int32_t & | cols, | ||
float64_t *& | bias, | ||
int32_t & | brows, | ||
int32_t & | bcols | ||
) |
get clustering
weights | |
rows | |
cols | |
bias | |
brows | |
bcols |
Definition at line 1284 of file GUIClassifier.cpp.
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inherited |
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inherited |
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inherited |
bool get_linear | ( | float64_t *& | weights, |
int32_t & | rows, | ||
int32_t & | cols, | ||
float64_t *& | bias, | ||
int32_t & | brows, | ||
int32_t & | bcols | ||
) |
get linear
weights | |
rows | |
cols | |
bias | |
brows | |
bcols |
Definition at line 1340 of file GUIClassifier.cpp.
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inherited |
Definition at line 1100 of file SGObject.cpp.
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Returns description of a given parameter string, if it exists. SG_ERROR otherwise
param_name | name of the parameter |
Definition at line 1124 of file SGObject.cpp.
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Returns index of model selection parameter with provided index
param_name | name of model selection parameter |
Definition at line 1137 of file SGObject.cpp.
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virtual |
int32_t get_num_svms | ( | ) |
get number of SVMs in Multiclass
Definition at line 1246 of file GUIClassifier.cpp.
bool get_svm | ( | float64_t *& | weights, |
int32_t & | rows, | ||
int32_t & | cols, | ||
float64_t *& | bias, | ||
int32_t & | brows, | ||
int32_t & | bcols, | ||
int32_t | idx = -1 |
||
) |
get svm
weights | |
rows | |
cols | |
bias | |
brows | |
bcols | |
idx |
Definition at line 1252 of file GUIClassifier.cpp.
bool get_trained_classifier | ( | float64_t *& | weights, |
int32_t & | rows, | ||
int32_t & | cols, | ||
float64_t *& | bias, | ||
int32_t & | brows, | ||
int32_t & | bcols, | ||
int32_t | idx = -1 |
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) |
get trained classifier
weights | |
rows | |
cols | |
bias | |
brows | |
bcols | |
idx |
Definition at line 1191 of file GUIClassifier.cpp.
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virtualinherited |
If the SGSerializable is a class template then TRUE will be returned and GENERIC is set to the type of the generic.
generic | set to the type of the generic if returning TRUE |
Definition at line 268 of file SGObject.cpp.
bool load | ( | char * | filename, |
char * | type | ||
) |
load classifier from file
Definition at line 801 of file GUIClassifier.cpp.
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inherited |
maps all parameters of this instance to the provided file version and loads all parameter data from the file into an array, which is sorted (basically calls load_file_parameter(...) for all parameters and puts all results into a sorted array)
file_version | parameter version of the file |
current_version | version from which mapping begins (you want to use Version::get_version_parameter() for this in most cases) |
file | file to load from |
prefix | prefix for members |
Definition at line 673 of file SGObject.cpp.
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inherited |
loads some specified parameters from a file with a specified version The provided parameter info has a version which is recursively mapped until the file parameter version is reached. Note that there may be possibly multiple parameters in the mapping, therefore, a set of TParameter instances is returned
param_info | information of parameter |
file_version | parameter version of the file, must be <= provided parameter version |
file | file to load from |
prefix | prefix for members |
Definition at line 514 of file SGObject.cpp.
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virtualinherited |
Load this object from file. If it will fail (returning FALSE) then this object will contain inconsistent data and should not be used!
file | where to load from |
prefix | prefix for members |
param_version | (optional) a parameter version different to (this is mainly for testing, better do not use) |
Definition at line 345 of file SGObject.cpp.
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protectedvirtualinherited |
Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_POST is called.
ShogunException | Will be thrown if an error occurres. |
Reimplemented in CKernel, CWeightedDegreePositionStringKernel, CList, CAlphabet, CLinearHMM, CGaussianKernel, CInverseMultiQuadricKernel, CCircularKernel, and CExponentialKernel.
Definition at line 1029 of file SGObject.cpp.
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protectedvirtualinherited |
Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_PRE is called.
ShogunException | Will be thrown if an error occurres. |
Reimplemented in CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, CDynamicArray< uint64_t >, and CDynamicObjectArray.
Definition at line 1024 of file SGObject.cpp.
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inherited |
Takes a set of TParameter instances (base) with a certain version and a set of target parameter infos and recursively maps the base level wise to the current version using CSGObject::migrate(...). The base is replaced. After this call, the base version containing parameters should be of same version/type as the initial target parameter infos. Note for this to work, the migrate methods and all the internal parameter mappings have to match
param_base | set of TParameter instances that are mapped to the provided target parameter infos |
base_version | version of the parameter base |
target_param_infos | set of SGParamInfo instances that specify the target parameter base |
Definition at line 711 of file SGObject.cpp.
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protectedvirtualinherited |
creates a new TParameter instance, which contains migrated data from the version that is provided. The provided parameter data base is used for migration, this base is a collection of all parameter data of the previous version. Migration is done FROM the data in param_base TO the provided param info Migration is always one version step. Method has to be implemented in subclasses, if no match is found, base method has to be called.
If there is an element in the param_base which equals the target, a copy of the element is returned. This represents the case when nothing has changed and therefore, the migrate method is not overloaded in a subclass
param_base | set of TParameter instances to use for migration |
target | parameter info for the resulting TParameter |
Definition at line 918 of file SGObject.cpp.
bool new_classifier | ( | char * | name, |
int32_t | d = 6 , |
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int32_t | from_d = 40 |
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) |
create new classifier
Definition at line 114 of file GUIClassifier.cpp.
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protectedvirtualinherited |
This method prepares everything for a one-to-one parameter migration. One to one here means that only ONE element of the parameter base is needed for the migration (the one with the same name as the target). Data is allocated for the target (in the type as provided in the target SGParamInfo), and a corresponding new TParameter instance is written to replacement. The to_migrate pointer points to the single needed TParameter instance needed for migration. If a name change happened, the old name may be specified by old_name. In addition, the m_delete_data flag of to_migrate is set to true. So if you want to migrate data, the only thing to do after this call is converting the data in the m_parameter fields. If unsure how to use - have a look into an example for this. (base_migration_type_conversion.cpp for example)
param_base | set of TParameter instances to use for migration |
target | parameter info for the resulting TParameter |
replacement | (used as output) here the TParameter instance which is returned by migration is created into |
to_migrate | the only source that is used for migration |
old_name | with this parameter, a name change may be specified |
Definition at line 858 of file SGObject.cpp.
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inherited |
prints all parameter registered for model selection and their type
Definition at line 1076 of file SGObject.cpp.
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virtualinherited |
prints registered parameters out
prefix | prefix for members |
Definition at line 280 of file SGObject.cpp.
bool save | ( | char * | param | ) |
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virtualinherited |
Save this object to file.
file | where to save the object; will be closed during returning if PREFIX is an empty string. |
prefix | prefix for members |
param_version | (optional) a parameter version different to (this is mainly for testing, better do not use) |
Definition at line 286 of file SGObject.cpp.
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protectedvirtualinherited |
Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_POST is called.
ShogunException | Will be thrown if an error occurres. |
Reimplemented in CKernel.
Definition at line 1039 of file SGObject.cpp.
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protectedvirtualinherited |
Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_PRE is called.
ShogunException | Will be thrown if an error occurres. |
Reimplemented in CKernel, CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, CDynamicArray< uint64_t >, and CDynamicObjectArray.
Definition at line 1034 of file SGObject.cpp.
bool set_constraint_generator | ( | char * | cg | ) |
set constraint generator
Definition at line 1557 of file GUIClassifier.cpp.
bool set_do_auc_maximization | ( | bool | do_auc | ) |
bool set_elasticnet_lambda | ( | float64_t | lambda | ) |
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inherited |
set generic type to T
Definition at line 41 of file SGObject.cpp.
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inherited |
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set the parallel object
parallel | parallel object to use |
Definition at line 220 of file SGObject.cpp.
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set the version object
version | version object to use |
Definition at line 255 of file SGObject.cpp.
bool set_krr_tau | ( | float64_t | tau = 1 | ) |
set KRR's tau
Definition at line 1493 of file GUIClassifier.cpp.
bool set_max_train_time | ( | float64_t | max | ) |
set maximum train time
Definition at line 888 of file GUIClassifier.cpp.
bool set_mkl_block_norm | ( | float64_t | mkl_bnorm | ) |
bool set_mkl_interleaved_enabled | ( | bool | enabled | ) |
bool set_perceptron_parameters | ( | float64_t | lernrate, |
int32_t | maxiter | ||
) |
set perceptron parameters
lernrate | |
maxiter |
Definition at line 860 of file GUIClassifier.cpp.
bool set_solver | ( | char * | solver | ) |
set solver type
Definition at line 1506 of file GUIClassifier.cpp.
bool set_svm_batch_computation_enabled | ( | bool | enabled | ) |
set svm batch computation enabled
enabled |
Definition at line 1035 of file GUIClassifier.cpp.
bool set_svm_bias_enabled | ( | bool | enabled | ) |
bool set_svm_bufsize | ( | int32_t | bufsize | ) |
bool set_svm_epsilon | ( | float64_t | epsilon | ) |
bool set_svm_linadd_enabled | ( | bool | enabled | ) |
bool set_svm_max_qpsize | ( | int32_t | max_qpsize | ) |
set svm mkl parameters
weight_epsilon | |
C_mkl | |
mkl_norm |
Definition at line 934 of file GUIClassifier.cpp.
bool set_svm_nu | ( | float64_t | nu | ) |
bool set_svm_precompute_enabled | ( | int32_t | precompute | ) |
set svm precompute enabled
precompute |
bool set_svm_qpsize | ( | int32_t | qpsize | ) |
bool set_svm_shrinking_enabled | ( | bool | enabled | ) |
bool set_svr_tube_epsilon | ( | float64_t | tube_epsilon | ) |
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virtualinherited |
A shallow copy. All the SGObject instance variables will be simply assigned and SG_REF-ed.
Reimplemented in CGaussianKernel.
Definition at line 151 of file SGObject.h.
bool train_clustering | ( | int32_t | k = 3 , |
int32_t | max_iter = 1000 |
||
) |
train clustering
Definition at line 620 of file GUIClassifier.cpp.
bool train_knn | ( | int32_t | k = 3 | ) |
train K-nearest-neighbour
Definition at line 656 of file GUIClassifier.cpp.
bool train_krr | ( | ) |
train kernel ridge regression
Definition at line 683 of file GUIClassifier.cpp.
bool train_linear | ( | float64_t | gamma = 0 | ) |
train linear classifier
gamma | gamma parameter of LDA |
Definition at line 720 of file GUIClassifier.cpp.
bool train_mkl | ( | ) |
train MKL
Definition at line 455 of file GUIClassifier.cpp.
bool train_mkl_multiclass | ( | ) |
train MKL multiclass
Definition at line 409 of file GUIClassifier.cpp.
bool train_sparse_linear | ( | ) |
train sparse linear classifier
bool train_svm | ( | ) |
train SVM
Definition at line 524 of file GUIClassifier.cpp.
bool train_wdocas | ( | ) |
train WD OCAS
Definition at line 777 of file GUIClassifier.cpp.
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inherited |
unset generic type
this has to be called in classes specializing a template class
Definition at line 275 of file SGObject.cpp.
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virtualinherited |
Updates the hash of current parameter combination.
Definition at line 227 of file SGObject.cpp.
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C mkl
Definition at line 264 of file GUIClassifier.h.
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classifier
Definition at line 232 of file GUIClassifier.h.
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constraint generator
Definition at line 287 of file GUIClassifier.h.
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ent lambda
Definition at line 250 of file GUIClassifier.h.
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io
Definition at line 514 of file SGObject.h.
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krr tau
Definition at line 266 of file GUIClassifier.h.
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parameters wrt which we can compute gradients
Definition at line 529 of file SGObject.h.
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Hash of parameter values
Definition at line 535 of file SGObject.h.
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model selection parameters
Definition at line 526 of file SGObject.h.
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map for different parameter versions
Definition at line 532 of file SGObject.h.
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parameters
Definition at line 523 of file SGObject.h.
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max train time
Definition at line 234 of file GUIClassifier.h.
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mkl block norm
Definition at line 248 of file GUIClassifier.h.
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mkl norm
Definition at line 246 of file GUIClassifier.h.
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mkl use interleaved
Definition at line 268 of file GUIClassifier.h.
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parallel
Definition at line 517 of file SGObject.h.
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perceptron learnrate
Definition at line 236 of file GUIClassifier.h.
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perceptron maxiter
Definition at line 238 of file GUIClassifier.h.
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solver type
Definition at line 289 of file GUIClassifier.h.
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svm bufsize
Definition at line 242 of file GUIClassifier.h.
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svm C1
Definition at line 260 of file GUIClassifier.h.
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svm C2
Definition at line 262 of file GUIClassifier.h.
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svm do auc maximization
Definition at line 284 of file GUIClassifier.h.
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svm epsilon
Definition at line 254 of file GUIClassifier.h.
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svm max qpsize
Definition at line 244 of file GUIClassifier.h.
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svm nu
Definition at line 258 of file GUIClassifier.h.
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svm qpsize
Definition at line 240 of file GUIClassifier.h.
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svm tube epsilon
Definition at line 256 of file GUIClassifier.h.
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svm use batch computation
Definition at line 272 of file GUIClassifier.h.
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svm use bias
Definition at line 270 of file GUIClassifier.h.
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svm use linadd
Definition at line 274 of file GUIClassifier.h.
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svm use precompute
Definition at line 276 of file GUIClassifier.h.
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svm use precompute subkernel
Definition at line 278 of file GUIClassifier.h.
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svm use precompute subkernel light
Definition at line 280 of file GUIClassifier.h.
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svm use shrinking
Definition at line 282 of file GUIClassifier.h.
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svm weight epsilon
Definition at line 252 of file GUIClassifier.h.
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ui
Definition at line 230 of file GUIClassifier.h.
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version
Definition at line 520 of file SGObject.h.