SHOGUN
4.1.0
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Class UAIFILE used to read data from UAI files. See http://graphmod.ics.uci.edu/uai08/FileFormat for more details.
Public Member Functions | |||
CUAIFile () | |||
CUAIFile (FILE *f, const char *name=NULL) | |||
CUAIFile (const char *fname, char rw='r', const char *name=NULL) | |||
virtual | ~CUAIFile () | ||
virtual const char * | get_name () const | ||
void | close () | ||
FILE * | get_file_descriptor () | ||
void | set_variable_name (const char *name) | ||
char * | get_variable_name () | ||
virtual CSGObject * | shallow_copy () const | ||
virtual CSGObject * | deep_copy () const | ||
virtual bool | is_generic (EPrimitiveType *generic) const | ||
template<class T > | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
template<> | |||
void | set_generic () | ||
void | unset_generic () | ||
virtual void | print_serializable (const char *prefix="") | ||
virtual bool | save_serializable (CSerializableFile *file, const char *prefix="") | ||
virtual bool | load_serializable (CSerializableFile *file, const char *prefix="") | ||
void | set_global_io (SGIO *io) | ||
SGIO * | get_global_io () | ||
void | set_global_parallel (Parallel *parallel) | ||
Parallel * | get_global_parallel () | ||
void | set_global_version (Version *version) | ||
Version * | get_global_version () | ||
SGStringList< char > | get_modelsel_names () | ||
void | print_modsel_params () | ||
char * | get_modsel_param_descr (const char *param_name) | ||
index_t | get_modsel_param_index (const char *param_name) | ||
void | build_gradient_parameter_dictionary (CMap< TParameter *, CSGObject * > *dict) | ||
virtual void | update_parameter_hash () | ||
virtual bool | parameter_hash_changed () | ||
virtual bool | equals (CSGObject *other, float64_t accuracy=0.0, bool tolerant=false) | ||
virtual CSGObject * | clone () | ||
Parse Function | |||
Function to parse a given UAI file | |||
virtual void | parse () | ||
Network Type Access Function | |||
Function to set the network type
| |||
virtual void | set_net_type (const char *net_type) | ||
virtual void | set_num_vars (int32_t num_vars) | ||
virtual void | set_num_factors (int32_t num_vars) | ||
virtual void | set_vars_card (SGVector< int32_t > vars_card) | ||
virtual void | set_factors_scope (int32_t num_factors, const SGVector< int32_t > *factors_scope) | ||
virtual void | set_factors_table (int32_t num_factors, const SGVector< float64_t > *factors_table) | ||
virtual void | get_preamble (SGVector< char > &net_type, int32_t &num_vars, SGVector< int32_t > &vars_card, int32_t &num_factors, SGVector< int32_t > *&factors_scope) | ||
virtual void | get_factors_table (SGVector< float64_t > *&factors_table) | ||
Vector Access Functions | |||
vector access functions Functions to access vectors of one of the several base data types. These functions are used when writing vectors of length len to e.g. a file | |||
virtual void | get_vector (int8_t *&vector, int32_t &len) | ||
virtual void | get_vector (uint8_t *&vector, int32_t &len) | ||
virtual void | get_vector (char *&vector, int32_t &len) | ||
virtual void | get_vector (int32_t *&vector, int32_t &len) | ||
virtual void | get_vector (uint32_t *&vector, int32_t &len) | ||
virtual void | get_vector (float64_t *&vector, int32_t &len) | ||
virtual void | get_vector (float32_t *&vector, int32_t &len) | ||
virtual void | get_vector (floatmax_t *&vector, int32_t &len) | ||
virtual void | get_vector (int16_t *&vector, int32_t &len) | ||
virtual void | get_vector (uint16_t *&vector, int32_t &len) | ||
virtual void | get_vector (int64_t *&vector, int32_t &len) | ||
virtual void | get_vector (uint64_t *&vector, int32_t &len) | ||
virtual void | set_vector (const int8_t *vector, int32_t len) | ||
virtual void | set_vector (const uint8_t *vector, int32_t len) | ||
virtual void | set_vector (const char *vector, int32_t len) | ||
virtual void | set_vector (const int32_t *vector, int32_t len) | ||
virtual void | set_vector (const uint32_t *vector, int32_t len) | ||
virtual void | set_vector (const float32_t *vector, int32_t len) | ||
virtual void | set_vector (const float64_t *vector, int32_t len) | ||
virtual void | set_vector (const floatmax_t *vector, int32_t len) | ||
virtual void | set_vector (const int16_t *vector, int32_t len) | ||
virtual void | set_vector (const uint16_t *vector, int32_t len) | ||
virtual void | set_vector (const int64_t *vector, int32_t len) | ||
virtual void | set_vector (const uint64_t *vector, int32_t len) | ||
Vector Access Functions | |||
vector access functions Functions to access vectors of one of the several base data types. These functions are used when writing vectors of length len to e.g. a file | |||
virtual void | get_vector (bool *&vector, int32_t &len) | ||
virtual void | set_vector (const bool *vector, int32_t len) | ||
Matrix Access Functions | |||
Functions to access matrices of one of the several base data types. These functions are used when writing matrices of num_feat rows and num_vec columns to e.g. a file | |||
virtual void | get_matrix (bool *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (uint8_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (int8_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (char *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (int32_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (uint32_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (int64_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (uint64_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (float32_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (float64_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (floatmax_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (int16_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_matrix (uint16_t *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | set_matrix (const bool *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const uint8_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const int8_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const char *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const int32_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const uint32_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const int64_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const uint64_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const float32_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const float64_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const floatmax_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const int16_t *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_matrix (const uint16_t *matrix, int32_t num_feat, int32_t num_vec) | ||
N-Dimensional Array Access Functions | |||
nd-array access functions Functions to access n-dimensional arrays of one of the several base data types. These functions are used when loading n-dimensional arrays from e.g. file and return the them and its dimensions dims and num_dims by reference | |||
virtual void | get_ndarray (uint8_t *&array, int32_t *&dims, int32_t &num_dims) | ||
virtual void | get_ndarray (char *&array, int32_t *&dims, int32_t &num_dims) | ||
virtual void | get_ndarray (int32_t *&array, int32_t *&dims, int32_t &num_dims) | ||
virtual void | get_ndarray (float32_t *&array, int32_t *&dims, int32_t &num_dims) | ||
virtual void | get_ndarray (float64_t *&array, int32_t *&dims, int32_t &num_dims) | ||
virtual void | get_ndarray (int16_t *&array, int32_t *&dims, int32_t &num_dims) | ||
virtual void | get_ndarray (uint16_t *&array, int32_t *&dims, int32_t &num_dims) | ||
Sparse Vector Access Functions | |||
Functions to access sparse vectors of one of the several base data types. These functions are used when writing sparse vectors of num_feat entries to e.g. a file | |||
virtual void | get_sparse_vector (SGSparseVectorEntry< bool > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< uint8_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< int8_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< char > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< int32_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< uint32_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< int64_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< uint64_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< int16_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< uint16_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< float32_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< float64_t > *&entries, int32_t &num_feat) | ||
virtual void | get_sparse_vector (SGSparseVectorEntry< floatmax_t > *&entries, int32_t &num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< bool > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< uint8_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< int8_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< char > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< int32_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< uint32_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< int64_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< uint64_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< int16_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< uint16_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< float32_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< float64_t > *entries, int32_t num_feat) | ||
virtual void | set_sparse_vector (const SGSparseVectorEntry< floatmax_t > *entries, int32_t num_feat) | ||
Sparse Matrix Access Functions | |||
Functions to access sparse matrices of one of the several base data types. These functions are used when writing sparse matrices of num_feat rows and num_vec columns to e.g. a file | |||
virtual void | get_sparse_matrix (SGSparseVector< bool > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< uint8_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< int8_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< char > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< int32_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< uint32_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< int64_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< uint64_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< int16_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< uint16_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< float32_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< float64_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | get_sparse_matrix (SGSparseVector< floatmax_t > *&matrix, int32_t &num_feat, int32_t &num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< bool > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< uint8_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< int8_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< char > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< int32_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< uint32_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< int64_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< uint64_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< int16_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< uint16_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< float32_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< float64_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
virtual void | set_sparse_matrix (const SGSparseVector< floatmax_t > *matrix, int32_t num_feat, int32_t num_vec) | ||
String Access Functions | |||
Functions to access strings of one of the several base data types. These functions are used when writing variable length datatypes like strings to a file. Here num_str denotes the number of strings and strings is a pointer to a string structure. | |||
virtual void | get_string_list (SGString< bool > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< uint8_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< int8_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< char > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< int32_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< uint32_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< int16_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< uint16_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< int64_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< uint64_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< float32_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< float64_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | get_string_list (SGString< floatmax_t > *&strings, int32_t &num_str, int32_t &max_string_len) | ||
virtual void | set_string_list (const SGString< bool > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< uint8_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< int8_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< char > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< int32_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< uint32_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< int16_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< uint16_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< int64_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< uint64_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< float32_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< float64_t > *strings, int32_t num_str) | ||
virtual void | set_string_list (const SGString< floatmax_t > *strings, int32_t num_str) | ||
Static Public Member Functions | |
static char * | read_whole_file (char *fname, size_t &len) |
Public Attributes | |
SGIO * | io |
Parallel * | parallel |
Version * | version |
Parameter * | m_parameters |
Parameter * | m_model_selection_parameters |
Parameter * | m_gradient_parameters |
uint32_t | m_hash |
Protected Member Functions | |
virtual void | load_serializable_pre () throw (ShogunException) |
virtual void | load_serializable_post () throw (ShogunException) |
virtual void | save_serializable_pre () throw (ShogunException) |
virtual void | save_serializable_post () throw (ShogunException) |
Protected Attributes | |
CLineReader * | m_line_reader |
CParser * | m_parser |
CDelimiterTokenizer * | m_line_tokenizer |
CDelimiterTokenizer * | m_tokenizer |
char | m_delimiter |
int32_t | m_num_vars |
int32_t | m_num_factors |
SGVector< char > | m_net_type |
SGVector< int32_t > | m_vars_card |
SGVector< int32_t > * | m_factors_scope |
SGVector< float64_t > * | m_factors_table |
FILE * | file |
char | task |
char * | filename |
char * | variable_name |
CUAIFile | ( | ) |
default constructor
Definition at line 17 of file UAIFile.cpp.
CUAIFile | ( | FILE * | f, |
const char * | name = NULL |
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) |
constructor
f | already opened file |
name | variable name (e.g. "x" or "/path/to/x") |
Definition at line 22 of file UAIFile.cpp.
CUAIFile | ( | const char * | fname, |
char | rw = 'r' , |
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const char * | name = NULL |
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) |
constructor
fname | filename to open |
rw | mode, 'r' or 'w' |
name | variable name (e.g. "x" or "/path/to/x") |
Definition at line 38 of file UAIFile.cpp.
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virtual |
destructor
Definition at line 45 of file UAIFile.cpp.
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inherited |
Builds a dictionary of all parameters in SGObject as well of those of SGObjects that are parameters of this object. Dictionary maps parameters to the objects that own them.
dict | dictionary of parameters to be built. |
Definition at line 597 of file SGObject.cpp.
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virtualinherited |
Creates a clone of the current object. This is done via recursively traversing all parameters, which corresponds to a deep copy. Calling equals on the cloned object always returns true although none of the memory of both objects overlaps.
Definition at line 714 of file SGObject.cpp.
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virtualinherited |
A deep copy. All the instance variables will also be copied.
Definition at line 198 of file SGObject.cpp.
Recursively compares the current SGObject to another one. Compares all registered numerical parameters, recursion upon complex (SGObject) parameters. Does not compare pointers!
May be overwritten but please do with care! Should not be necessary in most cases.
other | object to compare with |
accuracy | accuracy to use for comparison (optional) |
tolerant | allows linient check on float equality (within accuracy) |
Definition at line 618 of file SGObject.cpp.
Function to access factor table
factors_table | table of all the factors |
Definition at line 308 of file UAIFile.cpp.
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inherited |
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inherited |
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inherited |
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inherited |
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virtualinherited |
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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inherited |
Definition at line 498 of file SGObject.cpp.
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inherited |
Returns description of a given parameter string, if it exists. SG_ERROR otherwise
param_name | name of the parameter |
Definition at line 522 of file SGObject.cpp.
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inherited |
Returns index of model selection parameter with provided index
param_name | name of model selection parameter |
Definition at line 535 of file SGObject.cpp.
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virtual |
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
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virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtual |
Function to access preamble
net_type | type of network |
num_vars | number of variables |
vars_card | cardinality of variables |
num_factors | number of factors |
factors_scope | scope of all the factors |
Definition at line 292 of file UAIFile.cpp.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
inherited |
|
virtualinherited |
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtualinherited |
If the SGSerializable is a class template then TRUE will be returned and GENERIC is set to the type of the generic.
generic | set to the type of the generic if returning TRUE |
Definition at line 296 of file SGObject.cpp.
|
virtualinherited |
Load this object from file. If it will fail (returning FALSE) then this object will contain inconsistent data and should not be used!
file | where to load from |
prefix | prefix for members |
Definition at line 369 of file SGObject.cpp.
|
protectedvirtualinherited |
Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_POST is called.
ShogunException | will be thrown if an error occurs. |
Reimplemented in CKernel, CWeightedDegreePositionStringKernel, CList, CAlphabet, CLinearHMM, CGaussianKernel, CInverseMultiQuadricKernel, CCircularKernel, and CExponentialKernel.
Definition at line 426 of file SGObject.cpp.
|
protectedvirtualinherited |
Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_PRE is called.
ShogunException | will be thrown if an error occurs. |
Reimplemented in CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, and CDynamicObjectArray.
Definition at line 421 of file SGObject.cpp.
|
virtualinherited |
Definition at line 262 of file SGObject.cpp.
|
virtual |
Definition at line 173 of file UAIFile.cpp.
|
inherited |
prints all parameter registered for model selection and their type
Definition at line 474 of file SGObject.cpp.
|
virtualinherited |
prints registered parameters out
prefix | prefix for members |
Definition at line 308 of file SGObject.cpp.
|
staticinherited |
|
virtualinherited |
Save this object to file.
file | where to save the object; will be closed during returning if PREFIX is an empty string. |
prefix | prefix for members |
Definition at line 314 of file SGObject.cpp.
|
protectedvirtualinherited |
Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_POST is called.
ShogunException | will be thrown if an error occurs. |
Reimplemented in CKernel.
Definition at line 436 of file SGObject.cpp.
|
protectedvirtualinherited |
Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_PRE is called.
ShogunException | will be thrown if an error occurs. |
Reimplemented in CKernel, CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, and CDynamicObjectArray.
Definition at line 431 of file SGObject.cpp.
|
virtual |
Function to set the scope of factors
num_factors | number of factors |
factors_scope | list of factors scope (SGVector<int32_t>) |
Definition at line 257 of file UAIFile.cpp.
Function to set the table of factors
num_factors | number of factors |
factors_table | list of factors table (SGVector<float64_t>) |
Definition at line 275 of file UAIFile.cpp.
|
inherited |
Definition at line 41 of file SGObject.cpp.
|
inherited |
Definition at line 46 of file SGObject.cpp.
|
inherited |
Definition at line 51 of file SGObject.cpp.
|
inherited |
Definition at line 56 of file SGObject.cpp.
|
inherited |
Definition at line 61 of file SGObject.cpp.
|
inherited |
Definition at line 66 of file SGObject.cpp.
|
inherited |
Definition at line 71 of file SGObject.cpp.
|
inherited |
Definition at line 76 of file SGObject.cpp.
|
inherited |
Definition at line 81 of file SGObject.cpp.
|
inherited |
Definition at line 86 of file SGObject.cpp.
|
inherited |
Definition at line 91 of file SGObject.cpp.
|
inherited |
Definition at line 96 of file SGObject.cpp.
|
inherited |
Definition at line 101 of file SGObject.cpp.
|
inherited |
Definition at line 106 of file SGObject.cpp.
|
inherited |
Definition at line 111 of file SGObject.cpp.
|
inherited |
set generic type to T
|
inherited |
|
inherited |
set the parallel object
parallel | parallel object to use |
Definition at line 241 of file SGObject.cpp.
|
inherited |
set the version object
version | version object to use |
Definition at line 283 of file SGObject.cpp.
|
virtualinherited |
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, and CBinaryFile.
|
virtual |
Definition at line 223 of file UAIFile.cpp.
|
virtual |
Function to set number of factors
num_vars | number of factors |
Definition at line 251 of file UAIFile.cpp.
|
virtual |
Function to set number of variables
num_vars | number of variables |
Definition at line 235 of file UAIFile.cpp.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
Reimplemented in CCSVFile, CProtobufFile, CBinaryFile, and CLibSVMFile.
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
virtualinherited |
Reimplemented in CCSVFile, CBinaryFile, and CProtobufFile.
|
inherited |
|
virtual |
Function to set the cardinality of varibles
vars_card | vector of cardinality of variables |
Definition at line 241 of file UAIFile.cpp.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtual |
Reimplemented from CFile.
|
virtualinherited |
|
virtualinherited |
A shallow copy. All the SGObject instance variables will be simply assigned and SG_REF-ed.
Reimplemented in CGaussianKernel.
Definition at line 192 of file SGObject.cpp.
|
inherited |
unset generic type
this has to be called in classes specializing a template class
Definition at line 303 of file SGObject.cpp.
|
virtualinherited |
Updates the hash of current parameter combination
Definition at line 248 of file SGObject.cpp.
|
inherited |
io
Definition at line 369 of file SGObject.h.
|
protected |
|
inherited |
parameters wrt which we can compute gradients
Definition at line 384 of file SGObject.h.
|
inherited |
Hash of parameter values
Definition at line 387 of file SGObject.h.
|
protected |
|
protected |
|
inherited |
model selection parameters
Definition at line 381 of file SGObject.h.
|
protected |
|
inherited |
parameters
Definition at line 378 of file SGObject.h.
|
protected |
|
protected |
|
inherited |
parallel
Definition at line 372 of file SGObject.h.
|
protectedinherited |
|
inherited |
version
Definition at line 375 of file SGObject.h.