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Classes | Typedefs | Enumerations
Kernel.h File Reference

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Classes

class  CKernel
 The Kernel base class. More...

Typedefs

typedef float64_t KERNELCACHE_ELEM
typedef int64_t KERNELCACHE_IDX

Enumerations

enum  EOptimizationType { FASTBUTMEMHUNGRY, SLOWBUTMEMEFFICIENT }
enum  EKernelType {
  K_UNKNOWN = 0, K_LINEAR = 10, K_POLY = 20, K_GAUSSIAN = 30,
  K_GAUSSIANSHIFT = 32, K_GAUSSIANMATCH = 33, K_HISTOGRAM = 40, K_SALZBERG = 41,
  K_LOCALITYIMPROVED = 50, K_SIMPLELOCALITYIMPROVED = 60, K_FIXEDDEGREE = 70, K_WEIGHTEDDEGREE = 80,
  K_WEIGHTEDDEGREEPOS = 81, K_WEIGHTEDDEGREERBF = 82, K_WEIGHTEDCOMMWORDSTRING = 90, K_POLYMATCH = 100,
  K_ALIGNMENT = 110, K_COMMWORDSTRING = 120, K_COMMULONGSTRING = 121, K_SPECTRUMRBF = 122,
  K_SPECTRUMMISMATCHRBF = 123, K_COMBINED = 140, K_AUC = 150, K_CUSTOM = 160,
  K_SIGMOID = 170, K_CHI2 = 180, K_DIAG = 190, K_CONST = 200,
  K_DISTANCE = 220, K_LOCALALIGNMENT = 230, K_PYRAMIDCHI2 = 240, K_OLIGO = 250,
  K_MATCHWORD = 260, K_TPPK = 270, K_REGULATORYMODULES = 280, K_SPARSESPATIALSAMPLE = 290,
  K_HISTOGRAMINTERSECTION = 300, K_WAVELET = 310, K_WAVE = 320, K_CAUCHY = 330,
  K_TSTUDENT = 340, K_RATIONAL_QUADRATIC = 350, K_MULTIQUADRIC = 360, K_EXPONENTIAL = 370,
  K_SPHERICAL = 380, K_SPLINE = 390, K_ANOVA = 400, K_POWER = 410,
  K_LOG = 420, K_CIRCULAR = 430, K_INVERSEMULTIQUADRIC = 440, K_DISTANTSEGMENTS = 450,
  K_BESSEL = 460, K_JENSENSHANNON = 470, K_DIRECTOR = 480, K_PRODUCT = 490,
  K_LINEARARD = 500, K_GAUSSIANARD = 510, K_STREAMING = 520
}
enum  EKernelProperty { KP_NONE = 0, KP_LINADD = 1, KP_KERNCOMBINATION = 2, KP_BATCHEVALUATION = 4 }

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