| --- Log opened Sun Feb 10 00:00:45 2013 | ||
| heiko1 | sonney2k, wiking, around? | 00:22 |
|---|---|---|
| heiko1 | which of the gmock, gtest do I need to have the sources from? | 00:22 |
| heiko1 | and of which can I use the ubuntu package? | 00:23 |
| n4nd0 | heiko1: hey | 00:25 |
| n4nd0 | I think there's a package for gtest | 00:25 |
| heiko1 | n4nd0, hi! | 00:25 |
| heiko1 | I remember that wiking told me that I have to download one manually | 00:26 |
| heiko1 | but I forgot which one | 00:26 |
| heiko1 | :) | 00:26 |
| n4nd0 | gmock probably | 00:26 |
| n4nd0 | I had to download that one too | 00:26 |
| heiko1 | ok | 00:26 |
| heiko1 | and use the ubuntu package libgtest-dev? | 00:26 |
| n4nd0 | mmm I am not sure, I am on arch and the package was called gtest | 00:26 |
| heiko1 | I see, well it compiled | 00:27 |
| heiko1 | make unittest does the magic right? | 00:27 |
| n4nd0 | I run make inside tests/unit/ | 00:28 |
| n4nd0 | but wiking mentioned sth about make unit-test or so | 00:28 |
| heiko1 | ok | 00:28 |
| n4nd0 | unit-tests I think | 00:28 |
| heiko1 | cool fernando, thanks! | 00:29 |
| n4nd0 | heiko1: :) | 00:29 |
| n4nd0 | btw, I read the project idea you mentioned before | 00:29 |
| n4nd0 | it sounds very nice | 00:29 |
| heiko1 | yeah, I think it would be great to have | 00:30 |
| n4nd0 | are you planning to write down the idea with a couple of references maybe? | 00:30 |
| heiko1 | yes | 00:30 |
| heiko1 | In fact, I am writing a paper about that | 00:30 |
| n4nd0 | very cool | 00:31 |
| heiko1 | could attract many people .) | 00:31 |
| n4nd0 | students to do that project or users once it is done? | 00:31 |
| n4nd0 | both maybe hehe | 00:31 |
| heiko1 | I had the latter in mind, no idea whether its attractive to students | 00:32 |
| heiko1 | I mean the word "statistic" itself is not the most attractive one :) | 00:32 |
| n4nd0 | haha maybe not | 00:32 |
| heiko1 | But if we had that everyone who would like to compute Gaussian likelihoods (or in general likelihoods with a log-determinant in them) of a large model could use shogun | 00:33 |
| n4nd0 | which sounds nice | 00:33 |
| heiko1 | I know of not many people who can do this | 00:33 |
| heiko1 | so statisticians can do their MCMC | 00:33 |
| heiko1 | ML people can do maximum likelihood methods | 00:34 |
| heiko1 | etc etc | 00:34 |
| n4nd0 | I see | 00:34 |
| heiko1 | I am currently trying to do inference on a worldwide-grid of ozone data | 00:34 |
| heiko1 | 200000 observations | 00:35 |
| n4nd0 | what is the application? | 00:35 |
| heiko1 | and it works! | 00:35 |
| heiko1 | estimate posterior distributions of a spatial linear gaussian model, say for whether reports | 00:35 |
| n4nd0 | aham | 00:36 |
| heiko1 | this involves computing the determinant of this sparse 200000x200000 matrix. Matlab or R cannot do this, but then shogun could | 00:36 |
| heiko1 | would also be nice to have a proper implementation for the paper | 00:36 |
| heiko1 | btw will you participate this year? | 00:37 |
| heiko1 | heiko@heiko-ThinkPad-T420:~/Desktop/shogun/shogun/src$ make unit-tests | 00:37 |
| heiko1 | echo yes | 00:37 |
| heiko1 | yes | 00:37 |
| heiko1 | make -C ../tests/unit | 00:37 |
| heiko1 | make[1]: Entering directory `/home/heiko/Desktop/shogun/shogun/tests/unit' | 00:37 |
| heiko1 | make[1]: *** No rule to make target `../../gmock-1.6.0/src/gmock-all.cc', needed by `gmock-all.o'. Stop. | 00:37 |
| heiko1 | any ideas here? | 00:37 |
| n4nd0 | I will send a couple of proposals for sure :) | 00:37 |
| heiko1 | nice :) | 00:37 |
| n4nd0 | heiko1: try to cd to tests/unit and run make there | 00:38 |
| heiko1 | yes, same | 00:38 |
| heiko1 | do I need to do make install before? | 00:38 |
| n4nd0 | so | 00:39 |
| n4nd0 | try to configure first and see if the script detects gtest and gmock on your system | 00:39 |
| n4nd0 | the default directories are | 00:39 |
| heiko1 | yes it does | 00:40 |
| heiko1 | gtest from ubuntu paclkage | 00:40 |
| heiko1 | maybe I will add the sources manually too | 00:40 |
| n4nd0 | gmock is found too? | 00:40 |
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| n4nd0 | re | 00:41 |
| n4nd0 | I meant these two lines in ./configure trace | 00:42 |
| n4nd0 | Checking for Google C++ Testing Framework ... yes | 00:42 |
| n4nd0 | Checking for Google C++ Mocking Framework ... yes | 00:42 |
| heiko1 | yeah | 00:42 |
| heiko1 | both | 00:42 |
| n4nd0 | ok | 00:42 |
| heiko1 | I just removed them from ubuntu and configured with manual sources, lets see if that works | 00:42 |
| n4nd0 | ok | 00:42 |
| heiko1 | do you already have some project in mind for gsoc? like some extension of the old stuff? | 00:42 |
| n4nd0 | to continue doing SO stuff would be cool | 00:43 |
| n4nd0 | but I am interested in new stuff | 00:43 |
| n4nd0 | also* | 00:43 |
| n4nd0 | so I don't know | 00:43 |
| n4nd0 | brb | 00:44 |
| heiko1 | got the tests working | 00:46 |
| heiko1 | they fail :) | 00:48 |
| heiko1 | (but at least compile and run) | 00:48 |
| n4nd0 | back | 00:53 |
| n4nd0 | hehe ok | 00:53 |
| n4nd0 | were do they fail? | 00:53 |
| n4nd0 | I got them OK, with some warnings though | 00:54 |
| heiko1 | it might be the trace-mallocs | 01:16 |
| heiko1 | since they also leak memory | 01:16 |
| heiko1 | will investigate tomorrow, time to sleep! | 01:16 |
| heiko1 | good night! | 01:16 |
| n4nd0 | night | 02:05 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :master * a119187 / tests/unit/lib/SGVector_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/a119187825cdfe97038e889b1893cebc1de46a2e | 20:18 |
| shogun-notifier- | shogun: use expect_double_eq for double comparison | 20:18 |
| shogun-buildbot | build #801 of deb1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/801 | 20:23 |
| shogun-buildbot | build #186 of ubu1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/ubu1%20-%20libshogun/builds/186 | 20:43 |
| blackburn | back to green | 20:44 |
| shogun-notifier- | shogun: Sergey Lisitsyn :master * c8b58e5 / .gitignore,src/Makefile.template: https://github.com/shogun-toolbox/shogun/commit/c8b58e5cd9407902ffa13f895f202e2b0be8b628 | 21:09 |
| shogun-notifier- | shogun: Preparations for GCOV code coverage tool usage | 21:09 |
| shogun-notifier- | shogun: | 21:09 |
| shogun-notifier- | shogun: Ignored .gcno file extension | 21:09 |
| shogun-notifier- | shogun: Updated Makefile to clean .gcno files | 21:09 |
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| n4nd0 | blackburn: preparations for gcov? | 21:15 |
| n4nd0 | is it something similar to gtest? | 21:15 |
| blackburn | n4nd0: tool for code coverage | 21:15 |
| n4nd0 | aham | 21:16 |
| n4nd0 | a new concept, you are teaching me every day :) | 21:16 |
| blackburn | lol | 21:17 |
| blackburn | what is new for you? | 21:17 |
| n4nd0 | code coverage tools | 21:18 |
| blackburn | I am a great teacher that knows nothing | 21:18 |
| blackburn | :D | 21:18 |
| shogun-buildbot | build #802 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/802 blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com> | 21:20 |
| shogun-notifier- | shogun: Sergey Lisitsyn :master * c515f49 / src/shogun/lib/malsar/ (3 files): https://github.com/shogun-toolbox/shogun/commit/c515f49661ed3bfde488fa9597c9a7b75484f4ba | 21:46 |
| shogun-notifier- | shogun: Dummy malsar routines doc | 21:46 |
| @sonney2k | blackburn, so what does gcov say / how do we use it? | 21:47 |
| blackburn | sonney2k: I didn't manage to try yet | 21:47 |
| blackburn | will do step-by-step | 21:47 |
| blackburn | I managed to create .gcno files but didn't try to profile it yet | 21:48 |
| @sonney2k | blackburn, hmmh | 21:48 |
| @sonney2k | never tried so clueless... | 21:48 |
| blackburn | sonney2k: step by step :) | 21:48 |
| @sonney2k | n4nd0, btw I managed to get the submission form on to be on the sgto site; http://shogun-toolbox.org/page/Events/registration | 21:50 |
| @sonney2k | n4nd0, any news about making the hierarchy work? | 21:50 |
| blackburn | sonney2k: doesn't fit in my browser | 21:50 |
| blackburn | by width | 21:50 |
| n4nd0 | sonney2k: the form looks nice embedded | 21:50 |
| @sonney2k | blackburn, can we change the generated form somehow? | 21:51 |
| n4nd0 | no, I have not looked into that | 21:51 |
| blackburn | sonney2k: change like? | 21:51 |
| @sonney2k | blackburn, make it less wide | 21:51 |
| blackburn | I am not sure about that | 21:51 |
| @sonney2k | no useless background | 21:52 |
| @sonney2k | image | 21:52 |
| @sonney2k | etc | 21:52 |
| blackburn | ah sure | 21:52 |
| blackburn | sonney2k: better? | 21:53 |
| @sonney2k | blackburn, yes now we need to shorten or linebreak this thing "Do you want to give a talk about your research that involved Shogun? Please place your abstract here it if you do or even provide a link a possibly published paper that uses shogun." | 21:58 |
| blackburn | sonney2k: tried - fail | 22:04 |
| blackburn | sonney2k: here comes DA MASTER | 22:10 |
| blackburn | :D | 22:10 |
| blackburn | now fits | 22:10 |
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| --- Log closed Mon Feb 11 00:00:45 2013 | ||
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