| --- Log opened Sat Mar 09 00:00:05 2013 | ||
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| shogun-buildbot | build #316 of nightly_default is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_default/builds/316 | 04:37 |
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| lambday | hello.. I am trying to implement a string kernel... how do I do some testing? I mean, I want to see what type of return values I get when I write get_feature_vector inside the "compute" function... | 12:47 |
| lambday | I tried writing a small main function but getting some linking error | 12:47 |
| lambday | -lshogun is needed? | 12:49 |
| blackburn | lambday: sure | 12:50 |
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| lambday | blackburn: thanks..but when I'm using the new kernel, I'm getting a ld error... while using other kernels doesn't give that error... | 12:56 |
| blackburn | lambday: you probably forgot to implement some method then (just guess) | 12:56 |
| lambday | blackburn: umm... the error is "temp.cpp:(.text+0x35): undefined reference to `shogun::CSSKStringKernel::CSSKStringKernel()" | 12:57 |
| blackburn | lambday: no constructor implementation around then :) | 12:58 |
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| lambday | blackburn: but I did :( I'm checking again | 12:59 |
| blackburn | lambday: paste .cpp somewhere and I'll check | 13:13 |
| lambday | blackburn: this is SSKStringKernel.h [http://pastebin.com/MiUdEFeY] and this is SSKStringKernel.cpp [http://pastebin.com/Rhb4rHxe]... I am using SNPStringKernel file to modify.. compute method is incomplete but it should work | 13:21 |
| blackburn | lambday: I see nothing wrong so far | 13:23 |
| lambday | to be sure, all I have to do is to add the .h and .cpp file in the kernel/string dir and run a make, right? | 13:23 |
| lambday | i see the obj file is there in kernel/string | 13:23 |
| blackburn | lambday: yes | 13:24 |
| blackburn | lambday: they won't be available in modular interface if you don't add them to interfaces/modular/Kernel.i | 13:24 |
| blackburn | and Kernel_includes.i in the same dir | 13:24 |
| blackburn | but linking error is different | 13:25 |
| lambday | oh... | 13:25 |
| lambday | but I am just using this simple cpp file to test [http://pastebin.com/J2qxA9UL] | 13:25 |
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| lambday | when I use SNP it works, but for SSK its giving that undefined ref error | 13:26 |
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| blackburn | lambday: strange, I didn't notify anything wrong with that constructor | 13:34 |
| lambday | blackburn: :( | 13:36 |
| lambday | does it matter which interface it is configured to? since i am not using any interface | 13:37 |
| blackburn | lambday: no | 13:38 |
| lambday | okay then I am doing a make clean and then make | 13:40 |
| blackburn | yes makes sense sometimes | 13:40 |
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| lambday | blackburn: didn't help... even strange - I added a method foobar to one of the existing kernels and tried to call it, it shows undefined reference again - but make was successful :-/ | 14:12 |
| lambday | may be I'm linking it wrong :-/ | 14:13 |
| blackburn | wiking: ping | 14:19 |
| blackburn | lambday: no, -lshogun should be enough | 14:19 |
| lambday | then may be i am linking it to an older libshogun.so | 14:22 |
| lambday | I am checking | 14:22 |
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| lambday | blackburn: yup.. corrected it and now its working.. :) | 14:27 |
| lambday | thanks a lot, man :) | 14:27 |
| blackburn | lambday: nice | 14:27 |
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| shogun-notifier- | shogun: Evgeniy Andreev :master * c291dc2 / src/shogun/transfer/multitask/MultitaskKernelMaskNormalizer.h: https://github.com/shogun-toolbox/shogun/commit/c291dc27317da6483b31857eff7d9d620981c508 | 16:27 |
| shogun-notifier- | shogun: added forgotten include | 16:27 |
| shogun-notifier- | shogun: Evgeniy Andreev :master * b432027 / src/interfaces/python_modular/protocols_helper.i: https://github.com/shogun-toolbox/shogun/commit/b432027d1ed785a947b78ee9832b4d463bffe376 | 16:27 |
| shogun-notifier- | shogun: fix: checking python's version for buffer protocol | 16:27 |
| shogun-notifier- | shogun: Sergey Lisitsyn :master * 1f4a951 / src/ (2 files): https://github.com/shogun-toolbox/shogun/commit/1f4a9514dd40081e5161d74f6cb66821643a9648 | 16:27 |
| shogun-notifier- | shogun: Merge pull request #913 from gsomix/fixes | 16:27 |
| shogun-notifier- | shogun: | 16:27 |
| shogun-notifier- | shogun: Small pack of fixes: buffer protocol and compiling | 16:27 |
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| blackburn | sonney2k: gsomix fixed his stuff | 17:06 |
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| gsomix | hi | 17:37 |
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| wiking | blackburn: pong | 20:13 |
| blackburn | wiking: wanted to ask you about clang static analyzer | 20:13 |
| wiking | blackburn: listening | 20:14 |
| blackburn | wiking: it generates no output for a reason | 20:14 |
| blackburn | wiking: how did you use it? | 20:14 |
| wiking | ah well u have output here | 20:14 |
| wiking | http://categorizer.tmit.bme.hu/~wiking/shogun.sa/2013-03-09-2/ | 20:14 |
| wiking | but if u wanna use it locally | 20:14 |
| wiking | basically it's done like this | 20:14 |
| blackburn | wiking: I want output for tapkee :) | 20:14 |
| blackburn | ah btw | 20:15 |
| wiking | scan-build ./configure | 20:15 |
| wiking | scan-build make | 20:15 |
| blackburn | wiking: are you running mac now? | 20:15 |
| wiking | ye | 20:15 |
| blackburn | wiking: could you please test tapkee? | 20:15 |
| wiking | mmm lemme checkout | 20:15 |
| blackburn | wiking: git clone git://github.com/lisitsyn/tapkee.git && cd tapkee && mkdir build && cmake -Dbuild_tests=1 .. && make && make test | 20:16 |
| blackburn | oops | 20:16 |
| blackburn | wiking: git clone git://github.com/lisitsyn/tapkee.git && cd tapkee && mkdir build && cd build && cmake -Dbuild_tests=1 .. && make && make test | 20:16 |
| wiking | -- Could NOT find OpenMP (missing: OpenMP_C_FLAGS OpenMP_CXX_FLAGS) | 20:16 |
| wiking | CMake Error at CMakeLists.txt:29 (include_directories): include_directories given empty-string as include directory. | 20:16 |
| blackburn | here comes full thing for convenience :) | 20:16 |
| wiking | the problem is clang does not have openmp | 20:17 |
| blackburn | yeah I know | 20:17 |
| blackburn | let me check | 20:17 |
| blackburn | wiking: is that an error? | 20:17 |
| wiking | yepp | 20:17 |
| wiking | cmake dies with this | 20:17 |
| blackburn | hmmm it is not rquired.. | 20:17 |
| wiking | well it still dies like that | 20:18 |
| blackburn | wiking: it says can't found but continues here | 20:18 |
| wiking | it tries all the different ways to find openmp | 20:18 |
| blackburn | -- Could NOT find OpenMP (missing: OpenMP_CXX_FLAGS) | 20:18 |
| blackburn | -- Found minimal setup for the Google Mock library: | 20:18 |
| blackburn | -- Configuring done | 20:18 |
| blackburn | -- Generating done | 20:18 |
| wiking | and then it does this | 20:18 |
| wiking | CMake Error at CMakeLists.txt:29 (include_directories): include_directories given empty-string as include directory. | 20:18 |
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| blackburn | wiking: ahh | 20:19 |
| blackburn | wiking: strange it doesn't detect gmock | 20:19 |
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| blackburn | wiking: update please | 20:20 |
| wiking | blackburn: gmock is not in usual path | 20:20 |
| wiking | how can i define it? | 20:20 |
| wiking | CMake Error at CMakeLists.txt:70 (add_executable): | 20:21 |
| wiking | Cannot find source file: | 20:21 |
| wiking | test/simple.cpp | 20:21 |
| wiking | Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp | 20:21 |
| wiking | .hxx .in .txx | 20:21 |
| blackburn | wiking: once again | 20:21 |
| blackburn | wiking: about gmock | 20:21 |
| blackburn | try -DGMOCK_SOURCE_ROOT=.. | 20:22 |
| wiking | -- Found minimal setup for the Google Mock library: /Users/wiking/gmock-1.6.0 | 20:23 |
| wiking | -- Configuring done | 20:23 |
| wiking | CMake Error at CMakeLists.txt:70 (add_executable): | 20:23 |
| wiking | Cannot find source file: | 20:23 |
| wiking | test/simple.cpp | 20:23 |
| wiking | Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp | 20:23 |
| wiking | .hxx .in .txx | 20:23 |
| blackburn | wiking: update ;) | 20:23 |
| blackburn | just added it | 20:23 |
| wiking | ok now it ran fine... building | 20:25 |
| blackburn | wiking: good you pointed it out | 20:25 |
| wiking | 100%] Building CXX object CMakeFiles/tapkee_tests.dir/test/simple.cpp.o | 20:26 |
| wiking | Linking CXX executable tapkee_tests | 20:26 |
| wiking | ld: library not found for -lgmock | 20:26 |
| wiking | clang: error: linker command failed with exit code 1 (use -v to see invocation) | 20:26 |
| wiking | i think there's a missing -L there | 20:26 |
| wiking | or something | 20:26 |
| blackburn | I do not have much tests but just to check if it is working under mac | 20:26 |
| blackburn | uhm | 20:26 |
| wiking | r u building gtest/gmock statics ? | 20:26 |
| wiking | as u'll have to do that | 20:27 |
| blackburn | wiking: something is wrong with that gmock detection script | 20:27 |
| blackburn | wiking: why? it works here as is | 20:27 |
| wiking | that gmock i give him is purely the src | 20:27 |
| wiking | there's no .so neither .a | 20:27 |
| wiking | of gmock | 20:27 |
| wiking | you should not expect having gmock/gtest shared | 20:27 |
| wiking | as you should build them with the same compiler flags as your thing that u wanna test it with | 20:28 |
| wiking | i.e. see shogun unit testing build | 20:28 |
| blackburn | wiking: so I'd need to build gmock and then build tests with it? | 20:28 |
| wiking | indeed | 20:29 |
| wiking | u need to build gmock and gtest | 20:29 |
| wiking | as static library | 20:29 |
| wiking | and then link it to your testing executable | 20:29 |
| blackburn | wiking: okay I see, requires some magic | 20:30 |
| wiking | otherwise the main file builds | 20:30 |
| blackburn | wiking: okay what about main thing | 20:31 |
| blackburn | wiking: it builds? | 20:31 |
| wiking | [master build] $ ./tapkee [wiking@welitron:~/tapkee/build] | 20:31 |
| wiking | [error] No input file specified. Please use -h flag if stucked | 20:31 |
| wiking | yes | 20:31 |
| blackburn | wiking: okay, thanks! I'll try to add something to build gmock | 20:32 |
| blackburn | wiking: not sure how to do that in cmake | 20:32 |
| wiking | ithink there's something about this in the documents of gmock/gtest | 20:32 |
| wiking | check their wiki | 20:32 |
| blackburn | wiking: nothing | 20:35 |
| wiking | :( | 20:35 |
| blackburn | wiking: I am surprised with a variety of cmake finders | 20:38 |
| blackburn | for gmock | 20:38 |
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| shogun-notifier- | shogun: Soeren Sonnenburg :master * caa80db / / (7 files): https://github.com/shogun-toolbox/shogun/commit/caa80db4b8e75e0222780c0449a0afc1967bf3ba | 21:19 |
| shogun-notifier- | shogun: blacklist director based examples and require new data version | 21:19 |
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| @sonney2k | blackburn, if you see gsomix tell him thanks for the buffer proto fixes but also tell him that the director stuff does not work... at least when I run generator.py things are randomly crashing :/ | 21:20 |
| blackburn | sonney2k: he is around now I guess | 21:20 |
| @sonney2k | gsomix, ahh there you are | 21:21 |
| @sonney2k | didn't see you :D | 21:21 |
| blackburn | sonney2k: but may be totally drunk | 21:21 |
| @sonney2k | blackburn, I know that he is Russian too | 21:21 |
| @sonney2k | so no news to me | 21:21 |
| blackburn | sonney2k: actually he is a bad russian | 21:21 |
| blackburn | sonney2k: he doesn't drink at all or so | 21:21 |
| @sonney2k | blackburn, drinking beer instead of vodka? | 21:21 |
| @sonney2k | ohh even worse | 21:22 |
| blackburn | sonney2k: yeah that's madness, I can't understand that | 21:22 |
| @sonney2k | no idea how you both can share a room | 21:22 |
| blackburn | sonney2k: I usually at work and just get home to sleep (already drunk) | 21:22 |
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| blackburn | sonney2k: I am now 'working' with waffles - what a crazy toolbox | 21:28 |
| blackburn | haha I have 73 commits today | 21:28 |
| blackburn | ah no | 21:29 |
| blackburn | 03-09 | 21:29 |
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| gsomix | sonney2k: hi | 21:52 |
| gsomix | sonney2k: ohh, shi~. I'll see at directors tomorrow. :( | 21:56 |
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| --- Log closed Sun Mar 10 00:00:10 2013 | ||
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