| --- Log opened Tue Jul 30 00:00:53 2013 | ||
| @iglesiasg | time to get home, see you later! | 00:08 |
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| @sonney2k | iglesiasg, I have a crashing test now! | 00:15 |
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| shogun-buildbot | build #1114 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1114 blamelist: Evgeniy Andreev <gsomix@gmail.com>, Soeren Sonnenburg <sonne@debian.org> | 00:28 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9622005 | 00:34 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9622822 | 00:52 |
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| shogun-buildbot | build #1426 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1426 blamelist: Evgeniy Andreev <gsomix@gmail.com>, Soeren Sonnenburg <sonne@debian.org> | 00:59 |
| van51 | sonney2k: sent a PR | 01:14 |
| van51 | sonney2k: I'll leave it running tonight to compare | 01:14 |
| van51 | sonney2k: I' ll also add another PR tomorrow morning about quadratic features in the HashedDocDotFeatures class | 01:14 |
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| shogun-buildbot | build #473 of nightly_default is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/nightly_default/builds/473 | 04:52 |
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| shogun-notifier- | shogun: Fernando Iglesias :develop * 1d9e358 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/1d9e35861a9063586690bf34531ae0079fc07a46 | 06:24 |
| shogun-notifier- | shogun: Update LMNN to compute outer products on demand instead of keeping them in memory. | 06:24 |
| shogun-notifier- | shogun: Update its unit tests too. | 06:24 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 7b7b8a0 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/7b7b8a0e4724c5819158663b372daf62cc5cf61b | 06:24 |
| shogun-notifier- | shogun: Merge pull request #1329 from iglesias/feature/lmnn | 06:24 |
| shogun-notifier- | shogun: | 06:24 |
| shogun-notifier- | shogun: Update LMNN to compute outer products on demand instead of keeping them ... | 06:24 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9632836 | 06:50 |
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| shogun-buildbot | build #1115 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1115 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 06:54 |
| @iglesiasg | hi gsomix! | 06:56 |
| gsomix | iglesiasg, hi | 06:57 |
| gsomix | and good morning | 06:57 |
| @iglesiasg | gsomix: yeah good morning, sorry :) | 06:57 |
| @iglesiasg | gsomix: I think cygwin has some trouble with the quotes in CSVFile, any idea? | 06:57 |
| @iglesiasg | gsomix: http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1115 | 06:58 |
| gsomix | iglesiasg, yep. fixing. | 06:58 |
| @iglesiasg | gsomix: cool, thank you! | 06:59 |
| @iglesiasg | let's see if we can get cygwin happy (looks like an impossible task) | 06:59 |
| shogun-buildbot | build #1427 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1427 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 07:09 |
| gsomix | compiling... =____= | 07:11 |
| shogun-buildbot | build #1116 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1116 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 07:22 |
| gsomix | iglesiasg, hey | 07:40 |
| gsomix | iglesiasg, can you merge it? added new unit-test, now all things works right. https://github.com/shogun-toolbox/shogun/pull/1331 | 07:41 |
| @iglesiasg | gsomix: nice! | 07:42 |
| @iglesiasg | gsomix: are you in a rush to get it merged? Otherwise, let's wait until travis build is done | 07:42 |
| gsomix | iglesiasg, ok, let's give him a job. :) | 07:44 |
| shogun-buildbot | build #1428 of deb3 - modular_interfaces is complete: Failure [failed compile octave_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1428 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 07:44 |
| @iglesiasg | gsomix: it is looking nice indeed, I just made a very minor comment | 07:45 |
| @iglesiasg | gsomix: mmm weird https://travis-ci.org/shogun-toolbox/shogun/jobs/9634442 | 07:47 |
| @iglesiasg | I thought c++11 was already enabled in travis | 07:47 |
| gsomix | iglesiasg, aww, ok | 07:48 |
| gsomix | I need check one thing | 07:48 |
| @iglesiasg | gsomix: maybe it was enabled only with clang | 07:48 |
| @iglesiasg | gsomix: yep, it seems to be that since: Checking for C++11 Atomic Integer ... no | 07:49 |
| @iglesiasg | gsomix: what compiler do you use locally? If it is g++, did you have to enable C++11 yourself somehow? | 07:49 |
| gsomix | iglesiasg, g++, nope. I think I can avoid #include <cinttypes>. | 07:50 |
| @iglesiasg | gsomix: all right | 07:51 |
| @iglesiasg | gsomix: otherwise, maybe there is some #ifdef something we can use | 07:51 |
| @iglesiasg | gsomix: so if Shogun is not compiled with C++11 support, at least we don't get the crash | 07:51 |
| gsomix | iglesiasg, do you know why SHOGUN needs to recompile all after commit/rebase/push? | 07:51 |
| @iglesiasg | gsomix: after rebase yes if any header gets updated | 07:52 |
| @iglesiasg | gsomix: but after commit/push I don't know | 07:52 |
| gsomix | any header? strange. it wants recompile all headers after rebase. :\ | 07:53 |
| gsomix | ok | 07:53 |
| gsomix | need time to compile | 07:53 |
| * gsomix went for tea. | 07:54 | |
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| @iglesiasg | gsomix: yes I mean, in the moment you change a single header (note that this includes classes with templates), everything is re-compiled | 07:57 |
| gsomix | lisitsyn, sup, nigga? | 07:57 |
| lisitsyn | gsomix: yes | 08:00 |
| lisitsyn | or okay :D | 08:00 |
| lisitsyn | I don't know what to answer | 08:00 |
| @iglesiasg | haha | 08:00 |
| lisitsyn | sonney2k: how can we send an evaluation for georg? | 08:00 |
| lisitsyn | iglesiasg: apparently I am your mentor too hahaha | 08:01 |
| @iglesiasg | lisitsyn: he is not able to get internet connection at the end? | 08:01 |
| lisitsyn | I am terrible | 08:01 |
| lisitsyn | iglesiasg: yes he is off | 08:01 |
| @iglesiasg | lisitsyn: let's hope there is no problem to make it on his behalf then | 08:01 |
| lisitsyn | iglesiasg: yeah we will resolve that for sure | 08:02 |
| lisitsyn | iglesiasg: I submitted my evaluation for your project | 08:04 |
| lisitsyn | and it looks like 'submitted' | 08:04 |
| @iglesiasg | lisitsyn: cool, thank you so much then! | 08:04 |
| lisitsyn | so I think that can be ok even with one mentor | 08:04 |
| lisitsyn | well it was mentioned only 'main' mentor is required | 08:04 |
| lisitsyn | I am not the main guy but whatever | 08:05 |
| lisitsyn | :D | 08:05 |
| @iglesiasg | lisitsyn: so you did through your melange, right? | 08:05 |
| lisitsyn | iglesiasg: furthermore that decides whether I can go to SF with sonney2k and HeikoS | 08:05 |
| lisitsyn | :D | 08:05 |
| lisitsyn | iglesiasg: yes | 08:05 |
| @iglesiasg | lisitsyn: hehe yeah now you can get your flight there! | 08:05 |
| @iglesiasg | lisitsyn: I guess it should be fine too. Have you seen any similar query in the mentors mailing list? Do you think we should ask just in case? | 08:06 |
| lisitsyn | iglesiasg: ahh it seems there is only one | 08:06 |
| lisitsyn | I mean no matter how many mentors you have | 08:06 |
| lisitsyn | haha that's crazy because they ask some things like 'have you been a gsoc student' | 08:07 |
| gsomix | iglesiasg, ok, next try | 08:08 |
| lisitsyn | iglesiasg: to increase madness I can submit evaluation for any student | 08:08 |
| lisitsyn | :D | 08:08 |
| @iglesiasg | haha | 08:08 |
| @wiking | mornin' | 08:17 |
| gsomix | iglesiasg, green :) | 08:20 |
| gsomix | wiking, yo | 08:21 |
| @iglesiasg | wiking: hey! | 08:24 |
| @iglesiasg | lisitsyn, wiking: did you guys read from yesterday's logs about the doc sprint? | 08:24 |
| lisitsyn | iglesiasg: I didn't | 08:25 |
| @iglesiasg | lisitsyn: http://shogun-toolbox.org/page/contact/irclog/2013-07-29/ from about 22:19 | 08:26 |
| @wiking | again doc camp? | 08:29 |
| @wiking | last year we didn't get in | 08:29 |
| @wiking | : | 08:29 |
| @wiking | :P | 08:29 |
| lisitsyn | iglesiasg: I think we should try to come up with concrete idea | 08:29 |
| lisitsyn | wiking: ^ | 08:29 |
| lisitsyn | like 'killing hamsters with SVM' | 08:29 |
| @iglesiasg | eeeh all right :D | 08:29 |
| @wiking | :> | 08:29 |
| lisitsyn | I guess we can write only about SVMs | 08:29 |
| @wiking | now that we have GP ? :) | 08:30 |
| lisitsyn | ahhhh GP | 08:30 |
| @wiking | comeon :> | 08:30 |
| lisitsyn | but I am clueless idiot | 08:30 |
| @wiking | anywho | 08:30 |
| @wiking | anyhow | 08:30 |
| lisitsyn | no clue about GP at all | 08:30 |
| @wiking | i can hop on the blue train of doc camp | 08:30 |
| @wiking | to have 4 ppl | 08:30 |
| lisitsyn | we have 4 I think | 08:30 |
| @wiking | since i have time now :P | 08:30 |
| lisitsyn | wiking: haha yeah | 08:30 |
| @wiking | lisitsyn: i saw from the log: sonney2k heiko and iglesiasg | 08:30 |
| lisitsyn | yes and me | 08:31 |
| @wiking | so they needed +1 | 08:31 |
| @wiking | ah ok | 08:31 |
| lisitsyn | wiking: 5 is better | 08:31 |
| lisitsyn | ? | 08:31 |
| lisitsyn | ;) | 08:31 |
| @wiking | then u dont need me :))) | 08:31 |
| @wiking | but yeah i mean no worries | 08:31 |
| @wiking | i can come | 08:31 |
| @wiking | and happy to work on it | 08:31 |
| @wiking | buuuut | 08:31 |
| @wiking | cmake has prio | 08:31 |
| lisitsyn | wiking: well I can have any kind of trouble | 08:31 |
| @wiking | so now i'll make a coffee | 08:31 |
| @wiking | and try to finish that today | 08:31 |
| @wiking | and then do a rebase | 08:31 |
| @wiking | and see what happens | 08:31 |
| @iglesiasg | wiking: full cmake by today? | 08:31 |
| @iglesiasg | that sounds like a dream! | 08:32 |
| @wiking | iglesiasg: well it's really fucking working | 08:32 |
| @iglesiasg | wow, awesome | 08:32 |
| @wiking | so i dont know why u r surprised | 08:32 |
| @iglesiasg | :D | 08:32 |
| @wiking | just really need to finish with the rest of modulars | 08:32 |
| lisitsyn | wiking: argh sorry I postpone it all the time :D | 08:32 |
| @wiking | although i havent even touched static | 08:32 |
| @wiking | i guess that's needed for matlab as well | 08:32 |
| @iglesiasg | all right, looking forward to it then | 08:32 |
| @iglesiasg | indeed | 08:32 |
| lisitsyn | wiking: well we can drop static hahahh | 08:33 |
| lisitsyn | that's my dream | 08:33 |
| lisitsyn | I have a dream | 08:33 |
| @wiking | anyhow i want to make first a nice and smooth ccmake menu | 08:33 |
| @wiking | so now i'll work on that first | 08:33 |
| @wiking | and then after that i'll see about the interfaces | 08:33 |
| lisitsyn | good there is no cccmake | 08:33 |
| lisitsyn | and ccccmake | 08:33 |
| @iglesiasg | :) | 08:33 |
| @wiking | :> | 08:33 |
| @iglesiasg | lisitsyn: I guess we cannot drop static until we get something else for Matlab... | 08:34 |
| lisitsyn | iglesiasg: of coursssssse | 08:37 |
| lisitsyn | iglesiasg: wiking: we need something really concrete | 08:39 |
| lisitsyn | 'SVMs for terribly big data about some shit' | 08:39 |
| lisitsyn | 'how to sort this shit out with SVMs' | 08:39 |
| lisitsyn | whatever | 08:39 |
| lisitsyn | (brand new) (with pictures) | 08:40 |
| lisitsyn | with such a labels from 90s | 08:40 |
| @iglesiasg | lisitsyn: maybe something related to MKL since sonney2k is the expert? | 08:42 |
| lisitsyn | nooo I think we should go for something less 'smart' iglesiasg | 08:43 |
| lisitsyn | like the thing for hackers you showed | 08:43 |
| lisitsyn | MKL is just a research field | 08:43 |
| @wiking | oh woah i didn't know about cpack | 08:50 |
| gsomix | iglesiasg, lisitsyn, wiking hey guys, can you push magic "MERGE IT AND MAKE ME HAPPY" button on my PR? :) | 08:51 |
| @iglesiasg | gsomix: sure | 08:51 |
| gsomix | cool | 08:52 |
| gsomix | then I can take shower. | 08:52 |
| shogun-notifier- | shogun: Evgeniy Andreev :develop * aaa9597 / / (3 files): https://github.com/shogun-toolbox/shogun/commit/aaa95976211fe3b7a12d5851c204885758838d3d | 08:52 |
| shogun-notifier- | shogun: fixed format for fprintf in CSVFile | 08:52 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * e569cf6 / / (3 files): https://github.com/shogun-toolbox/shogun/commit/e569cf60c5c036a76d3f85c31517bf6d4cce3d80 | 08:52 |
| shogun-notifier- | shogun: Merge pull request #1331 from gsomix/feature/parser | 08:52 |
| shogun-notifier- | shogun: | 08:52 |
| shogun-notifier- | shogun: Fixed format for fprintf in CSVFile | 08:52 |
| lisitsyn | the world | 08:53 |
| lisitsyn | the time has come to | 08:53 |
| lisitsyn | push da button | 08:53 |
| lisitsyn | galvanize! tadada | 08:53 |
| @iglesiasg | :) | 08:53 |
| lisitsyn | iglesiasg: know that song? | 08:53 |
| @iglesiasg | lisitsyn: yeah, sure | 08:53 |
| lisitsyn | iglesiasg: I hope they are not swedish | 08:53 |
| lisitsyn | ;) | 08:53 |
| @iglesiasg | I think chemical brothers are from the UK | 08:54 |
| gsomix | lisitsyn, hm, now I know what to listen today. :] | 08:54 |
| @iglesiasg | let me check | 08:54 |
| lisitsyn | iglesiasg: each time we talk about music it appears the band is from sweden :D | 08:54 |
| @iglesiasg | lisitsyn: yeah, it happens a lot :) | 08:54 |
| gsomix | general speaking training | 08:56 |
| gsomix | guys, what music do you prefer? or what do you listened to the last week/month? | 08:56 |
| @iglesiasg | gsomix: I am listening these days to the tomorrowland sessions from this weekend | 08:57 |
| lisitsyn | I like music from 70s porno movies | 08:57 |
| @wiking | btw r modular is now fixed? | 08:57 |
| @iglesiasg | lisitsyn: haha what kind of music is that? lol | 08:57 |
| lisitsyn | iglesiasg: oh it sounds like it is from porno | 08:58 |
| @iglesiasg | gsomix: I watched this movie the other day. Think the soundtrack is cool: http://www.youtube.com/watch?v=j97WR_slydY | 08:58 |
| shogun-buildbot | build #1609 of deb1 - libshogun is complete: Failure [failed test] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1609 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 08:58 |
| @iglesiasg | gsomix: there is something funny with CSVFileTest.read_matrix unit_test | 08:59 |
| gsomix | iglesiasg, mmm? | 08:59 |
| @iglesiasg | gsomix: http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1609/steps/test/logs/stdio | 09:00 |
| @iglesiasg | gsomix: it crashed in my machine too, as well as ParserTest.tokenization_reals | 09:00 |
| gsomix | wut? O_O | 09:00 |
| gsomix | iglesiasg, ok, I'll check. | 09:01 |
| @iglesiasg | gsomix: I am compiling latest code with your new commit just in case that changed something | 09:01 |
| gsomix | shower is canceled, huh | 09:02 |
| @iglesiasg | gsomix: but CSVFileTest.read_matrix crashes in my machine when doing make in tests/unit, not when running it alone though. But with valgrind detects some use of uninitialised memory | 09:02 |
| @iglesiasg | gsomix: hehe I guess the fix can wait a bit too :) | 09:02 |
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| van51 | good morning | 09:14 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9635760 | 09:17 |
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| @iglesiasg | gsomix: have a look also to that other test please when you get a moment | 09:23 |
| gsomix | iglesiasg, M | 09:24 |
| gsomix | *m& | 09:24 |
| gsomix | *m? | 09:24 |
| gsomix | awww | 09:24 |
| gsomix | :/ | 09:24 |
| @iglesiasg | gsomix: are you ok? :P | 09:24 |
| @iglesiasg | gsomix: https://travis-ci.org/shogun-toolbox/shogun/jobs/9635761 | 09:24 |
| gsomix | iglesiasg, I hope. | 09:24 |
| @iglesiasg | gsomix: SGObject.clone_equals_CSVFile, maybe there is something unitiliased? Just guessing | 09:25 |
| gsomix | iglesiasg, yep. already fixed. | 09:25 |
| gsomix | iglesiasg, btw can you send my yours valgrind log? | 09:26 |
| gsomix | *to me | 09:26 |
| gsomix | very strange that tests works fine at my machine :\ | 09:28 |
| @iglesiasg | gsomix: sendind you valgrind trace ... | 09:40 |
| @iglesiasg | gsomix: so valgrind does not complain at all in your machine? | 09:40 |
| gsomix | iglesiasg, only at unitiliased values | 09:41 |
| shogun-buildbot | build #1117 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1117 blamelist: Evgeniy Andreev <gsomix@gmail.com> | 09:42 |
| @iglesiasg | gsomix: http://pastebin.com/z8615XKp | 09:42 |
| gsomix | iglesiasg, thanks. it's fixed. | 09:46 |
| @iglesiasg | gsomix: PR then? | 09:46 |
| @iglesiasg | gsomix: we will wait this time to see everything is fine with travis :) | 09:46 |
| gsomix | iglesiasg, yeah. | 09:47 |
| shogun-buildbot | build #1429 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1429 blamelist: Evgeniy Andreev <gsomix@gmail.com> | 10:11 |
| gsomix | iglesiasg, I figured out where is problem. | 10:37 |
| @iglesiasg | gsomix: where is it then? | 10:37 |
| gsomix | iglesiasg, ref/unref sgobjects in my code. I'm doing it totally wrong. | 10:38 |
| gsomix | fixing | 10:38 |
| @wiking | sonney2k: here? | 10:49 |
| @wiking | anybody here using java modular? | 10:49 |
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| thoralf | Heyho | 11:47 |
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| @wiking | HeikoS: yoyo | 11:57 |
| @HeikoS | wiking: hello mister | 11:57 |
| @HeikoS | how are things? | 11:57 |
| @wiking | working on cmake | 11:57 |
| @wiking | as soon as i have it ready i'll add those automatic tests | 11:58 |
| @HeikoS | wiking: cool! | 11:58 |
| @HeikoS | wiking: what do you think about tests on non-trivial instances? | 11:58 |
| @HeikoS | like for example DenseFeatures | 11:58 |
| @HeikoS | which then has a feature matrix, a subset and a preprocessor | 11:58 |
| @HeikoS | how to implement this best? | 11:59 |
| @wiking | HeikoS: aaah extra tests for those? | 11:59 |
| @wiking | ah no idea yet | 11:59 |
| @wiking | :) | 11:59 |
| @HeikoS | thoralf had the idea of automagically matching types and stuff | 11:59 |
| @wiking | i'm still trying to get ruby_modular working :))) | 11:59 |
| @HeikoS | I had the idea to just add a generate_std_instance() to every class | 11:59 |
| @wiking | i have a SGBase.i:322: Error: Unable to find 'std_vector.i' | 11:59 |
| @HeikoS | wiking: ah I see | 11:59 |
| @HeikoS | yeah, so lets do this later :) | 11:59 |
| thoralf | Hey HeikoS | 11:59 |
| @HeikoS | thoralf: hey | 11:59 |
| @HeikoS | thoralf: lets discuss with wiking at some point all our ideas | 12:00 |
| @HeikoS | wiking: but the automagic tests already revealed 100s of bugs | 12:00 |
| @HeikoS | very useful | 12:00 |
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| @HeikoS | if we have non-trivial tests, we can finally rely on serialisation etc | 12:00 |
| thoralf | HeikoS: Of course. Let's make an appointment. | 12:00 |
| @wiking | HeikoS: what would u like to have in non-trivial tests again? | 12:00 |
| @iglesiasg | hello hello | 12:00 |
| @HeikoS | wiking: currenlty, we do the automated tests on classes that have been generated with std constructors | 12:01 |
| @HeikoS | wiking: which means that everything is NULL, 0, -1 or similar | 12:01 |
| @HeikoS | wiking: but it would be good to also have concrete data in them | 12:02 |
| @HeikoS | and then test equals/clone/save | 12:02 |
| @HeikoS | will detect more problems | 12:02 |
| @HeikoS | and makes all these methods very stable | 12:02 |
| @wiking | HeikoS: well then we have to use the non default ctors ;) | 12:02 |
| @HeikoS | wiking: but how to do that for all classes automatically? | 12:02 |
| @wiking | HeikoS: aaall classes? | 12:03 |
| @HeikoS | wiking: there are also sometimes constraints on what data is allowed | 12:03 |
| @wiking | HeikoS: problem is that the non std ctor varies a lot | 12:03 |
| @HeikoS | wiking: so I had the idea to force people to implement a method that creates at least one non-trivial instance | 12:03 |
| @HeikoS | and then we can use that recursively to create tests | 12:03 |
| @iglesiasg | gsomix_: ping | 12:04 |
| gsomix_ | iglesiasg, pong | 12:04 |
| @wiking | HeikoS: mmmm lemme think about this a bit | 12:04 |
| @HeikoS | wiking: ok | 12:04 |
| @iglesiasg | gsomix_: news about CSVFile tests? | 12:05 |
| @HeikoS | wiking: CSGObject* CSGObject::create_non_trivial_instance()=0; | 12:05 |
| @HeikoS | wiking: which is implemented by the person who creates the class | 12:05 |
| @HeikoS | since he knows what to do | 12:05 |
| gsomix_ | iglesiasg, working. have many issues with ref/unref. :( | 12:06 |
| thoralf | HeikoS: Ah, you're discussing right now. | 12:06 |
| @HeikoS | wiking: thorals suggested that this should not be in the class definition itself but somewhere else to keep code clean from tests | 12:06 |
| @HeikoS | thoralf: no, just giving wiking the ideas we had | 12:06 |
| @iglesiasg | gsomix_: all right, get them tiger! :P | 12:07 |
| thoralf | HeikoS: What about using github-wiki for this? | 12:07 |
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| shogun-notifier- | shogun: Roman Votyakov :develop * aabab97 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/aabab97ae6b80860266ea4d1792d3625a4838b78 | 12:07 |
| shogun-notifier- | shogun: add numerical integration stuff | 12:07 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 4db24b7 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/4db24b7d88fafab5b827581e81f60f9d2a652547 | 12:07 |
| shogun-notifier- | shogun: Merge pull request #1324 from votjakovr/feature/numerical_integration | 12:07 |
| shogun-notifier- | shogun: | 12:07 |
| shogun-notifier- | shogun: Add numerical integration stuff | 12:07 |
| @HeikoS | thoralf: for what? | 12:08 |
| thoralf | HeikoS: We could write a sketch of our ideas. Maybe i helps us to overlook drawbacks of every idea. | 12:08 |
| thoralf | HeikoS: For documenting the requirements and our ideas. | 12:08 |
| @HeikoS | thoralf: yeah lets start an issue, there is a label on general things to discuss | 12:08 |
| shogun-buildbot | build #1610 of deb1 - libshogun is complete: Success [build successful] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb1%20-%20libshogun/builds/1610 | 12:17 |
| gsomix_ | HeikoS, iglesiasg hey, can you help me? when I create SGObject by using new, should I do SG_REF()? | 12:19 |
| @iglesiasg | gsomix_: no, there is no need | 12:20 |
| thoralf | HeikoS: Let's go https://github.com/shogun-toolbox/shogun/issues/1332 | 12:20 |
| @iglesiasg | gsomix_: it shouldn't hurt either. You will have to do SG_UNREF afterwards anyway | 12:21 |
| @HeikoS | gsomix_: what exactly is the problem? | 12:25 |
| @HeikoS | gsomix_: you should SG_REF it only if you want to keep the reference and use it later | 12:25 |
| @HeikoS | gsomix_: for example when you store it as a class member | 12:25 |
| gsomix_ | HeikoS, yeah. it's all that I need. | 12:26 |
| @HeikoS | gsomix_: then REF when you create and unref in destructor | 12:26 |
| @HeikoS | gsomix_: also unref potential old objects | 12:26 |
| @HeikoS | before you create new ones | 12:26 |
| @HeikoS | at the same pointer | 12:26 |
| gsomix_ | aha | 12:26 |
| gsomix_ | HeikoS, iglesiasg thanks! | 12:27 |
| shogun-buildbot | build #1118 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1118 blamelist: Roman Votyakov <votjakovr@gmail.com> | 12:27 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9641406 | 12:33 |
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| * gsomix_ away | 12:41 | |
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| shogun-buildbot | build #1119 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1119 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 12:57 |
| shogun-buildbot | build #1430 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1430 blamelist: Roman Votyakov <votjakovr@gmail.com> | 13:02 |
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| @sonney2k | HeikoS, wiking hey there | 13:11 |
| @HeikoS | sonney2k: hi! | 13:12 |
| @sonney2k | HeikoS, so what about doc camp? | 13:17 |
| @HeikoS | sonney2k: hey | 13:17 |
| @HeikoS | I checked a bit what they do there | 13:17 |
| @sonney2k | HeikoS, you, iglesias & me and wiking? lisitsyn? | 13:17 |
| @HeikoS | I am not sure whether its applicable for us | 13:17 |
| @sonney2k | HeikoS, they write a book :) | 13:18 |
| @sonney2k | HeikoS, ? | 13:18 |
| @HeikoS | sonney2k: its larger projects, large groups of users etc | 13:18 |
| @HeikoS | sonney2k: so not sure | 13:18 |
| @HeikoS | would be cool though | 13:18 |
| @sonney2k | HeikoS, yes sure large as in KDE big | 13:18 |
| @sonney2k | s/big/size | 13:18 |
| @HeikoS | sonney2k: yep | 13:18 |
| @sonney2k | but apart from that it fits | 13:18 |
| @HeikoS | sonney2k: and what would we write about? | 13:19 |
| @sonney2k | HeikoS, maybe the big data hype could pay off | 13:19 |
| @HeikoS | sonney2k: haha yeah maybe | 13:19 |
| @HeikoS | ok then | 13:19 |
| @sonney2k | HeikoS, everything we have in shogun | 13:19 |
| @HeikoS | we can recycle last years application | 13:19 |
| @sonney2k | as in kernels, distances, kernel / distance machines | 13:19 |
| @sonney2k | etc etc | 13:19 |
| @sonney2k | it is doable IMHO | 13:19 |
| @HeikoS | sonney2k: I would rather not focus on the algorithms I think | 13:20 |
| @HeikoS | having seen what was done last year | 13:20 |
| @HeikoS | more like how development works, how to install, how to use, some basic algorightms ... | 13:21 |
| @HeikoS | not too mathematical | 13:21 |
| @HeikoS | and not a list of things | 13:21 |
| @HeikoS | but more an introduction to the concepts | 13:21 |
| @HeikoS | wiking: how to use the new random number generator? | 13:24 |
| @HeikoS | wiking: where is the instance ? | 13:24 |
| shogun-buildbot | build #1431 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1431 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 13:32 |
| @sonney2k | HeikoS, btw please send your evaluations today you are the last one missing :) | 13:33 |
| @sonney2k | HeikoS, no problem with that | 13:33 |
| @HeikoS | sonney2k: will do | 13:34 |
| @HeikoS | sonney2k: I gotta go now, see you later today | 13:34 |
| @wiking | HeikoS: sg_rand | 13:35 |
| @wiking | HeikoS: it's a global | 13:36 |
| @wiking | sonney2k: yo | 13:36 |
| @wiking | sonney2k: u used java_modular right? | 13:36 |
| @wiking | sonney2k: what was the jnilib name ? | 13:37 |
| @sonney2k | wiking, look at lambday's blog - it is on shogun planet | 13:37 |
| @sonney2k | he wrote some howto | 13:37 |
| @wiking | oh libmodshogun.so | 13:38 |
| @wiking | woah | 13:38 |
| @wiking | i'll have to fix this one | 13:38 |
| @wiking | ;) | 13:38 |
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| * gsomix here | 13:38 | |
| gsomix | sonney2k, hello | 13:40 |
| @sonney2k | wiking, ? | 13:43 |
| @sonney2k | gsomix, hey | 13:43 |
| gsomix | sonney2k, fixing bugs whole day. :\ | 13:45 |
| gsomix | sonney2k, I found strange behavior of fgets in unit-test. | 13:45 |
| gsomix | oooor it's strange behavior of my test | 13:48 |
| gsomix | =___= | 13:48 |
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| @wiking | sonney2k: cmake created the following lib for me: libjava_modular.jnilib | 13:53 |
| @sonney2k | wiking, ahh ok that doesn't work then :) | 13:56 |
| @wiking | sonney2k: but it should be ok i just need to rename it to libmodshogun.so during installing | 13:58 |
| @wiking | and that should be find | 13:58 |
| @wiking | *fine | 13:58 |
| @sonney2k | wiking, ahh ok | 14:03 |
| @wiking | ok so lua, ruby, python and java modular are compiled fine with cmake | 14:05 |
| @wiking | so now what we are actually missing is csharp, r, octave and matlab_static | 14:05 |
| @sonney2k | wiking, piece of cake then when you've come that far | 14:08 |
| @wiking | well yeh | 14:09 |
| @wiking | although i should do some more checks | 14:09 |
| @wiking | and then i should still work on the compiler flags | 14:09 |
| @wiking | as i really haven't even touched that part | 14:09 |
| @sonney2k | wiking, yeah well it is some hefty project | 14:10 |
| @sonney2k | it might take another (few) months to complete | 14:11 |
| @wiking | noway | 14:12 |
| lisitsyn | nahh compiler flags is easy part | 14:12 |
| @wiking | sonney2k: http://www.cmake.org/Wiki/CTest:Submission_Issues | 14:40 |
| @wiking | sonney2k: we could collect gtest outputs from users | 14:45 |
| @wiking | ;) | 14:45 |
| @wiking | automagically | 14:45 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 8588515 / / (4 files): https://github.com/shogun-toolbox/shogun/commit/85885154699dd618d961b566b389845e95ca1d7f | 14:54 |
| shogun-notifier- | shogun: add SGMatrixList more memory unittests and fix SG_MALLOC(SGMatrix...) issue | 14:54 |
| @sonney2k | wiking, errm lets say buildbots are sufficient :D | 14:55 |
| @sonney2k | iglesiasg, ^ that should do it! | 14:55 |
| @sonney2k | blue time! | 14:55 |
| @wiking | csharp modular done... | 15:09 |
| shogun-buildbot | build #1120 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1120 blamelist: Soeren Sonnenburg <sonne@debian.org> | 15:19 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9646523 | 15:28 |
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| @iglesiasg | sonney2k: great, thank you! | 15:29 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 54232cc / / (17 files): https://github.com/shogun-toolbox/shogun/commit/54232cc1ec2c429c1d7efb8e983aa0efdaffaf90 | 15:41 |
| shogun-notifier- | shogun: add lua, csharp, java, octave modular support | 15:41 |
| @wiking | lets see what travis does with this | 15:43 |
| @wiking | although example and test suit is still missing from cmake | 15:44 |
| @wiking | lisitsyn: transfer_multitask_clustered_logistic_regression.py | 15:46 |
| @wiking | do u know y no work? :) | 15:46 |
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| shogun-buildbot | build #1432 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1432 blamelist: Soeren Sonnenburg <sonne@debian.org> | 15:58 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9648471 | 16:23 |
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| shogun-notifier- | shogun: Viktor Gal :feature/CMake * 0f30d1f / CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/0f30d1f42197279742feb7e3c575d52e23bd1bb3 | 16:26 |
| shogun-notifier- | shogun: Restructure interface choosing in cmake | 16:26 |
| @wiking | can anybody tell me what are the required packages on deb/ubuntu for octave modular? | 16:42 |
| @wiking | (i dont have an ubuntu/deb distro at hand atm) | 16:42 |
| thoralf | wiking: Beside octave I only installed octave_dev (afaik) | 16:50 |
| @wiking | thoralf: on ubuntu? | 16:51 |
| thoralf | wiking: Yes. | 16:51 |
| @wiking | what's the exact name of that package ;) | 16:51 |
| thoralf | wiking: octave_dev | 16:51 |
| thoralf | :) | 16:51 |
| @wiking | liboctave-dev | 16:51 |
| @wiking | there's no such pkg on ubuntu according to packages.ubuntu.com | 16:51 |
| thoralf | Oh, yes. | 16:51 |
| thoralf | You're right. | 16:52 |
| @wiking | gsomix: your latest pr crashes circbuffer example ;) | 16:52 |
| @wiking | gsomix: library_circularbuffer | 16:53 |
| @wiking | gsomix: https://travis-ci.org/shogun-toolbox/shogun/jobs/9650009 | 16:53 |
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| @wiking | sonney2k: http://www.cmake.org/Wiki/CMake:Packaging_With_CPack | 17:07 |
| @wiking | i think we want this | 17:07 |
| gsomix | wiking, :( | 17:10 |
| pickle27 | lisitsyn: hey! | 17:18 |
| lisitsyn | pickle27: hey there | 17:18 |
| @wiking | lisitsyn: did u know about this http://www.cmake.org/Wiki/CMake:Packaging_With_CPack | 17:18 |
| pickle27 | lisitsyn: do you have a second? For the time being I'm going to pass on a R_modular example but I still want a R_static one | 17:19 |
| lisitsyn | pickle27: yes sure | 17:19 |
| pickle27 | lisitsyn: my 0ctave_static works but I get an error on my r_static I was hoping you could give me a hand | 17:19 |
| lisitsyn | wiking: no, what's it? | 17:19 |
| lisitsyn | wiking: I see it packages something | 17:20 |
| lisitsyn | :D | 17:20 |
| lisitsyn | to what packages? | 17:20 |
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| @wiking | lisitsyn: well as we talked that i'd be great to have packages of the nightly builts (tar.gz/bz2) | 17:20 |
| @wiking | this would be the best thing to use | 17:20 |
| @wiking | and as i can see it has debian package suppport as well | 17:21 |
| @wiking | and many other crazy package types | 17:21 |
| @wiking | http://www.cmake.org/Wiki/CMake:CPackPackageGenerators | 17:21 |
| @wiking | like rpm: http://www.cmake.org/Wiki/CMake:CPackPackageGenerators#RPM_.28Unix_Only.29 | 17:21 |
| pickle27 | lisitsyn: this is the error I get | 17:22 |
| pickle27 | Error in sg("apply_converter") : | 17:22 |
| pickle27 | [ERROR] assertion m_lhs_counter>=0 && m_lhs_counter<m_nlhs failed in void CRInterface::set_arg_increment(SEXP) file RInterface.h line 166 | 17:22 |
| @wiking | lisitsyn: so once we have cmake ready we can right away generate various packages as well | 17:22 |
| pickle27 | wiking: Im excited for cmake, do we have an eta? | 17:23 |
| @wiking | pickle27: mmmm today...? :) | 17:23 |
| pickle27 | wiking: no way! amazing! | 17:23 |
| @wiking | although i have to do a rebase with the develop branch so that'll be some extra | 17:23 |
| @wiking | maybe the latest tomorrow | 17:23 |
| lisitsyn | wiking: yeah cool thing | 17:24 |
| pickle27 | wiking: I want to start messing around with making a Go wrapper but I was waiting for cmake | 17:24 |
| lisitsyn | pickle27: hmm not sure what it is | 17:24 |
| lisitsyn | some ehm counter | 17:25 |
| pickle27 | lisitsyn: maybe I forgot to add something in my apply converter code | 17:26 |
| shogun-notifier- | shogun: Viktor Gal :feature/CMake * a152427 / .travis.yml,CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/a1524270311894eef824136c31b571ea4e6be9ae | 17:29 |
| shogun-notifier- | shogun: add missing endif in cmake | 17:29 |
| shogun-notifier- | shogun: add preliminary support for cpack | 17:29 |
| shogun-notifier- | shogun: add octave target to travis builds | 17:29 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9650154 | 17:30 |
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| pickle27 | lisitsyn: what is the counter supposed to do? | 17:35 |
| lisitsyn | pickle27: IDK :D | 17:39 |
| pickle27 | lisitsyn: okay I'll dig into it! | 17:39 |
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| shogun-notifier- | shogun: Roman Votyakov :develop * bdd0f58 / src/ (3 files): https://github.com/shogun-toolbox/shogun/commit/bdd0f5835a029ed1a5bf39549ea01ccd272e3b1f | 17:48 |
| shogun-notifier- | shogun: fix documentation for numerical integration stuff | 17:48 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 963ddc9 / src/ (3 files): https://github.com/shogun-toolbox/shogun/commit/963ddc9d9b8590777fb56f5b75da3ba3986c200f | 17:48 |
| shogun-notifier- | shogun: Merge pull request #1333 from votjakovr/feature/numerical_integration | 17:48 |
| shogun-notifier- | shogun: | 17:48 |
| shogun-notifier- | shogun: Fix documentation for numerical integration stuff | 17:48 |
| -!- votjakovr [~votjakovr@host-46-241-3-209.bbcustomer.zsttk.net] has joined #shogun | 18:00 | |
| shogun-buildbot | build #1121 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1121 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 18:02 |
| pickle27 | lisitsyn: fixed it! | 18:28 |
| pickle27 | now that I found the bug I'm not sure how octave worked... | 18:28 |
| -!- foulwall [~user@110.17.4.161] has quit [Ping timeout: 245 seconds] | 18:30 | |
| shogun-buildbot | build #1433 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1433 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 18:38 |
| @HeikoS | lisitsyn: around? | 18:40 |
| @HeikoS | I need c++ help :) | 18:40 |
| lisitsyn | pickle27: cool! | 18:40 |
| lisitsyn | HeikoS: yes | 18:40 |
| @HeikoS | or anyone else? | 18:40 |
| @wiking | tell | 18:40 |
| @HeikoS | lisitsyn: ok, I warn you, basic stuff ;) | 18:41 |
| @HeikoS | so I have a base class and a class that inherits from the base | 18:41 |
| @HeikoS | this call works | 18:41 |
| @HeikoS | float64_t result=((CProbabilityDistribution*)gauss)->log_pdf(x); | 18:41 |
| @HeikoS | and this call gives me a compile error | 18:41 |
| @HeikoS | float64_t result=gauss->log_pdf(x); | 18:41 |
| @HeikoS | why? | 18:41 |
| lisitsyn | what is the type of gauss? | 18:41 |
| pickle27 | lisitsyn: needed to set the number of return arguments | 18:41 |
| lisitsyn | pickle27: ahh | 18:42 |
| @HeikoS | gauss is of type CGaussian which inherits from CProbabiltyD... | 18:42 |
| lisitsyn | HeikoS: then it should work :D | 18:42 |
| pickle27 | lisitsyn: I believe the same fix needs to be applied to the embed method | 18:42 |
| @HeikoS | I know, but it doesnt, what are the caveats one can do while inheriting things? | 18:42 |
| lisitsyn | pickle27: oh please do it then | 18:42 |
| @HeikoS | I checked all I know but still ... | 18:43 |
| lisitsyn | HeikoS: log_pdf is virtual, righT? | 18:43 |
| @HeikoS | lisitsyn: yes | 18:43 |
| @HeikoS | virtual float64_t log_pdf(SGVector<float64_t> single_sample) const; | 18:43 |
| pickle27 | lisitsyn: I'm just going to port an example of using the embed converter to one of the static interfaces as we currently don't have any | 18:43 |
| gsomix | maybe dynamic_cast is needed? | 18:43 |
| @HeikoS | gsomix: would work, since the static one works | 18:44 |
| @HeikoS | but why does the compiler complain? | 18:44 |
| @HeikoS | error: no matching function for call to 'shogun::CGaussianDistribution::log_pdf(shogun::SGVector<double>&)' | 18:45 |
| @HeikoS | thats the error | 18:45 |
| @HeikoS | float64_t result=gauss->log_pdf(x); | 18:45 |
| @HeikoS | and thats the call | 18:45 |
| lisitsyn | HeikoS: no I see no reason actually | 18:45 |
| @HeikoS | where x is SGVector | 18:45 |
| @HeikoS | inheritance is public | 18:45 |
| @HeikoS | static cast works, thats the weirdest | 18:45 |
| @HeikoS | and the method is virtual | 18:46 |
| lisitsyn | HeikoS: so if you do this with static cast | 18:46 |
| lisitsyn | you get no error? | 18:46 |
| @HeikoS | yes | 18:46 |
| @HeikoS | (it also runs) | 18:46 |
| shogun-buildbot | build #1122 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1122 blamelist: Roman Votyakov <votjakovr@gmail.com> | 18:46 |
| lisitsyn | HeikoS: the only caveat I can imagine is different declarations of that method | 18:47 |
| @HeikoS | it is only defined in base class | 18:48 |
| @HeikoS | nowhere else | 18:48 |
| lisitsyn | HeikoS: is it public'ly inherited? | 18:52 |
| lisitsyn | like | 18:52 |
| lisitsyn | class CGaussian: public CProbabilityDistribution? | 18:52 |
| @HeikoS | class CGaussianDistribution: public CProbabilityDistribution | 18:52 |
| @HeikoS | yes | 18:52 |
| lisitsyn | HeikoS: is it implemented in CGaussianDistribution? | 18:52 |
| @HeikoS | no | 18:53 |
| @HeikoS | in base class | 18:53 |
| gsomix | is method also public? just for check. | 18:56 |
| @HeikoS | gsomix: yes | 18:56 |
| votjakovr | HeikoS: hi! The difference between our implementation of logit likelihood and GPML is less than 1e-3. Is it Ok? | 19:01 |
| @HeikoS | votjakovr: uh, thats not so precise | 19:01 |
| @HeikoS | votjakovr: can you test a more complex case? | 19:01 |
| @HeikoS | if it stays that low, its ok | 19:01 |
| @HeikoS | but better check | 19:02 |
| @HeikoS | so yes for now, but please check a bit after you sent the PR | 19:02 |
| votjakovr | HeikoS: we have more accurate integral evaluation than GPML has | 19:02 |
| @HeikoS | votjakovr: I know | 19:03 |
| votjakovr | HeikoS: absolute tolerance is something about 1e-10 | 19:03 |
| lisitsyn | HeikoS: I have no ideas left | 19:03 |
| @HeikoS | votjakovr: I think it is fine, but pls have a look at an example with a bit more data | 19:03 |
| @HeikoS | lisitsyn: weird stuff .... | 19:03 |
| lisitsyn | :/ | 19:03 |
| lisitsyn | HeikoS: yeah | 19:03 |
| lisitsyn | HeikoS: but it would make sense to carefully check definitions | 19:03 |
| @HeikoS | lisitsyn: did 10 times already, maybe tomorrow again | 19:04 |
| lisitsyn | HeikoS: then something else yeah | 19:04 |
| lisitsyn | I guess you'd notice something | 19:04 |
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| travis-ci | [travis-ci] it's Viktor Gal's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9653295 | 19:06 |
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| shogun-buildbot | build #1434 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1434 blamelist: Roman Votyakov <votjakovr@gmail.com> | 19:08 |
| pickle27 | lisitsyn: yeah we need it for embedding too, I didn't make an example but embed simply wraps apply | 19:08 |
| pickle27 | so its pretty clear we need it | 19:08 |
| pickle27 | I can make a PR after my current one is merged | 19:09 |
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| votjakovr | HeikoS: i've just sent a PR, if you have a time, please look at it | 19:18 |
| shogun-notifier- | shogun: Roman Votyakov :develop * e5365e6 / / (2 files): https://github.com/shogun-toolbox/shogun/commit/e5365e63d185ad49f4ad26ae87d7d6fff2e687dd | 19:21 |
| shogun-notifier- | shogun: implemented evaluation of predictions for logit likelihood | 19:21 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * f0188bb / / (2 files): https://github.com/shogun-toolbox/shogun/commit/f0188bb05b86aa610b9791260d9c64d4c7d43435 | 19:21 |
| shogun-notifier- | shogun: Merge pull request #1335 from votjakovr/feature/gp_binary_classification | 19:21 |
| shogun-notifier- | shogun: | 19:21 |
| shogun-notifier- | shogun: Implemented evaluation of predictions for logit likelihood | 19:21 |
| @HeikoS | votjakovr: so the logit classification stuff works now? :) | 19:22 |
| votjakovr | HeikoS: yep, but i think it needs an example :) | 19:22 |
| @HeikoS | votjakovr: very nice! | 19:22 |
| @HeikoS | votjakovr: could you write a simple and basic example for GP classification in c++ and in python_modular? | 19:23 |
| @HeikoS | votjakovr: just very very basic api usage and how to obtain predictions/confidences | 19:23 |
| @HeikoS | votjakovr: to make it easy for users to play with that | 19:23 |
| @HeikoS | votjakovr: big example will follow | 19:23 |
| @HeikoS | votjakovr: maybe in the example just use both likelihood we currently have and laplacian, but comment out all but one | 19:24 |
| @HeikoS | votjakovr: should be quickly be done since the stuff is already tested | 19:25 |
| votjakovr | HeikoS: sure, i'll do that :) | 19:25 |
| votjakovr | HeikoS: btw do GPs work well with python_modular now? I mean there was some problems | 19:27 |
| @HeikoS | votjakovr: I fixed that :) | 19:27 |
| @HeikoS | votjakovr: there is a new GaussianProcess.i file now, check it out | 19:28 |
| votjakovr | HeikoS: oh, thanks! | 19:28 |
| @HeikoS | everything is added in there | 19:28 |
| @HeikoS | votjakovr: the example can really be simple api demonstration ones, no need for fancy ML in there | 19:28 |
| @HeikoS | maybe a few comments on what is possible | 19:29 |
| votjakovr | HeikoS: btw shouldn't we again report to Carl about the problems? | 19:33 |
| @HeikoS | votjakovr: yep I agree, I think this time we are right since it seems to be an octave bug ;) | 19:34 |
| @HeikoS | votjakovr: could you send me your fix diff? | 19:34 |
| votjakovr | HeikoS: hmm, i've just replaced 32th line with: s2zero = 1; if nargin>3, if length(s2)>0, s2zero = 0; end, end % s2==0 ? | 19:36 |
| @HeikoS | yep that is fine | 19:37 |
| votjakovr | HeikoS: in likT.m | 19:37 |
| shogun-buildbot | build #1123 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1123 blamelist: Roman Votyakov <votjakovr@gmail.com> | 19:37 |
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| lambday | HeikoS: hi | 19:39 |
| @HeikoS | lambday: hi! | 19:40 |
| lambday | HeikoS: this week is really being tough on me :'( | 19:40 |
| @HeikoS | lambday: nice work with the wrapper! | 19:40 |
| lambday | HeikoS: I am having many many instu related stuffs to be taken care of :'( | 19:40 |
| lambday | HeikoS: thanks :( | 19:40 |
| lambday | insti* | 19:40 |
| @HeikoS | lambday: dont worry too much, schedule is looking very good | 19:41 |
| lambday | HeikoS: is it okay if I start working a bit late, say, thursday or friday this week? | 19:41 |
| lambday | HeikoS: my prof has threaten me to strip off my stipend if I don't work on his project :( | 19:41 |
| @HeikoS | lambday: yes thats fine, please do that | 19:42 |
| @HeikoS | lambday: it would be very bad if your stipend got canceled | 19:42 |
| @HeikoS | your degree is more important that GSoC | 19:42 |
| lambday | HeikoS: since Lapack works, I don't it will take me more than a few days to add Lanczos stuffs | 19:42 |
| @HeikoS | and also you probably can do this stuff easily | 19:42 |
| lambday | HeikoS: yes | 19:43 |
| @HeikoS | lambday: yeah, I think that will go fast | 19:43 |
| @HeikoS | lambday: and then the only thing thats missing is the probing sampler | 19:43 |
| lambday | HeikoS: thanks man! :D | 19:43 |
| @HeikoS | thats a lot of work, but we also got a lot of time | 19:43 |
| @HeikoS | lambday: dont worry, you have been doing quite a lot of stuff already, so relax and make your prof happy :) | 19:43 |
| lambday | HeikoS: probably I can use that PR's code that iglesias pointed out | 19:44 |
| @HeikoS | lambday: maybe, but I am not sure | 19:44 |
| @HeikoS | lambday: it might be a good idea to also check out some external libs, Ill also have a look | 19:44 |
| lambday | but I am not sure.. so I'll finish other stuffs by this week and think about next step from next week onwards | 19:44 |
| lambday | HeikoS: that would be great! they use colpack, may be we can check out that too... | 19:45 |
| @HeikoS | lambday: but they compute the colouring in a not so efficient way by multiplying matrices with itself | 19:46 |
| lambday | HeikoS: recently eigen3 people had some PRs regarding matrix powers... I am not too sure but wondering if we can take help from that | 19:46 |
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| @HeikoS | lambday: cool, that might be a good idea | 19:47 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9654071 | 19:47 |
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| @HeikoS | lisitsyn: python modular fails | 19:50 |
| @HeikoS | lisitsyn: its one of yours I think, transfer_multitask_clustered_logistic_regression | 19:50 |
| lambday | HeikoS: today my prof gave me a long lecture about how I am not doing anything significant for the lab while I've working for GSoC and actually doing something! I am not sure how I should take this :D he seems quite pissed off :( | 19:51 |
| lambday | HeikoS: oh and regarding the computation framework, there is a part in one of my lab's project where there are parallel computation of individual computable components are required | 19:52 |
| lisitsyn | HeikoS: yeah I know sorry | 19:52 |
| lambday | HeikoS: I said, that I probably can give something in that.. they exactly need to the openmpi implementation stuffs.. | 19:52 |
| lambday | HeikoS: may be after GSoC we can discuss? | 19:53 |
| @HeikoS | lambday: yeah | 19:53 |
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| @HeikoS | lambday: I would be very exxcited to do some mpi stuff | 19:53 |
| @HeikoS | but thats all later | 19:53 |
| @HeikoS | for now, make your prof happy and finish log-dets :) | 19:53 |
| @HeikoS | but very cool stuff | 19:54 |
| lambday | HeikoS: yes... me too | 19:54 |
| @HeikoS | I in fact had a meeting today, talking about large-scale implementations of the log-determinants | 19:54 |
| lambday | HeikoS: seems tha computation framework is going to be used by many many people! :D that makes me really happy :D | 19:54 |
| @HeikoS | and we will probably here build a large system for that... | 19:54 |
| @HeikoS | lambday: yeah totally | 19:54 |
| lambday | HeikoS: ahan! :D | 19:55 |
| @HeikoS | ah shit, I have to go now, theatre | 19:55 |
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| @HeikoS | I am going to be late ;) | 19:55 |
| @HeikoS | see you! | 19:55 |
| lambday | HeikoS: no problem man! I too have to go because I gotta prepare for a presentation for tomorrow :( | 19:55 |
| lambday | HeikoS: have a nice time! see you :) | 19:55 |
| @HeikoS | lambday: good luck with that! | 19:55 |
| @HeikoS | see you :) | 19:55 |
| lambday | bye :) | 19:55 |
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| shogun-buildbot | build #1435 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1435 blamelist: Roman Votyakov <votjakovr@gmail.com> | 20:08 |
| shogun-buildbot | build #1124 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1124 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 20:14 |
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| gsomix | iglesiasg, finally I learned how to work with SGObjects. | 20:22 |
| gsomix | good evening | 20:23 |
| @iglesiasg | gsomix: cool! | 20:23 |
| @iglesiasg | gsomix: do you feel like writing about it? maybe we can put it in the website so it is useful for everybody | 20:23 |
| @iglesiasg | gsomix: a very few lines would be enough | 20:23 |
| gsomix | iglesiasg, hm, good idea. | 20:24 |
| @iglesiasg | gsomix: or maybe just a mail in the mailing list like what you did for git flow | 20:25 |
| gsomix | huh, now it is hard time at my university. many school leavers tries win admission to SSAU. | 20:31 |
| gsomix | a lot of buzz in internets | 20:31 |
| @iglesiasg | gsomix: school leavers? What did they do? | 20:33 |
| @iglesiasg | stop studying or so? | 20:33 |
| gsomix | iglesiasg, I mean many people after high school ties enroll at university. now it's time. | 20:37 |
| gsomix | *tries | 20:37 |
| @iglesiasg | gsomix: aaah ok, got it | 20:37 |
| @iglesiasg | gsomix: I have a question btw | 20:37 |
| @iglesiasg | gsomix: https://github.com/gsomix/shogun/blob/b933aca7c513d8073bb7af830317fb4ff7ccf85f/examples/undocumented/libshogun/library_circularbuffer.cpp | 20:37 |
| @iglesiasg | gsomix: is start given some value by default? I thought local variables are not given any default value and this may cause problems in this example | 20:38 |
| @iglesiasg | gsomix: valgrind does not complain here about anything, so I am just wrong probably, sorry. | 20:41 |
| gsomix | iglesiasg, hm, next_token_idx gets reference to 'start' variable and initializes it | 20:43 |
| gsomix | http://arxiv.org/ftp/arxiv/papers/1110/1110.2832.pdf --- best abstract | 20:44 |
| gsomix | iglesiasg, but I can init it with value by default. not problem :) | 20:45 |
| @iglesiasg | gsomix: no, no need sorry | 20:46 |
| @iglesiasg | gsomix: I asked you before checking the function signature and missed the & | 20:46 |
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| shogun-notifier- | shogun: Evgeniy Andreev :develop * b933aca / / (12 files): https://github.com/shogun-toolbox/shogun/commit/b933aca7c513d8073bb7af830317fb4ff7ccf85f | 21:02 |
| shogun-notifier- | shogun: fixed ref/unref for readers | 21:02 |
| shogun-notifier- | shogun: Fernando Iglesias :develop * 02860e2 / / (12 files): https://github.com/shogun-toolbox/shogun/commit/02860e2cc0cdc906f3ce1be076c3a546d4b9ac3b | 21:02 |
| shogun-notifier- | shogun: Merge pull request #1334 from gsomix/feature/parser | 21:02 |
| shogun-notifier- | shogun: | 21:02 |
| shogun-notifier- | shogun: Bugfixes | 21:02 |
| gsomix | iglesiasg, thanks! | 21:02 |
| @iglesiasg | gsomix: thanks to you for the fix :) | 21:03 |
| gsomix | it's just my job. ?) | 21:04 |
| lisitsyn | iglesiasg: lets do stuff! | 21:05 |
| @iglesiasg | lisitsyn: what do you want to do? | 21:13 |
| lisitsyn | iglesiasg: no idea :D | 21:13 |
| pickle27 | lisitsyn: have you had a chance to look at my PR? | 21:18 |
| shogun-buildbot | build #1125 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1125 blamelist: Evgeniy Andreev <gsomix@gmail.com> | 21:18 |
| lisitsyn | pickle27: I am now trying to get rid of my bandwidth limit and then I'll check | 21:18 |
| pickle27 | lisitsyn: okay np! | 21:19 |
| * gsomix weeps | 21:19 | |
| shogun-buildbot | build #1126 of cyg1 - libshogun is complete: Failure [failed configure] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1126 blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com> | 21:19 |
| pickle27 | okay I'll be back in a bit! | 21:20 |
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| gsomix | sonney2k, hey | 21:29 |
| @sonney2k | gsomix, wassup? | 21:31 |
| gsomix | sonney2k, I will not available tomorrow at morning and day. want to visit lecture of Nobel prize winner 2000 | 21:33 |
| gsomix | sonney2k, I fixed today some bugs related to memory and ref/unref. | 21:33 |
| @sonney2k | gsomix, I hope you wrote some unit tests for that? | 21:35 |
| gsomix | sonney2k, hm, I wrote additional unit-test for reading/writing integers in csv. but for ref/unref test are the same | 21:36 |
| gsomix | *tests | 21:37 |
| gsomix | sonney2k, I just learned how we works with SGObjects in SHOGUN, no more. | 21:37 |
| gsomix | sonney2k, but I found bad case for CircularBuffer today. so I plan to refactor and simplify it for further support. I think it takes me one evening (tomorrow?) | 21:39 |
| gsomix | now I have CircularBuffer at paper and it works fine. :D | 21:39 |
| gsomix | next I can finish libsvm and quoting. | 21:40 |
| gsomix | sonney2k, all ok? | 21:42 |
| @wiking | sonney2k: ping | 21:49 |
| @wiking | lisitsyn: check this shit, it's really cool: http://www.cmake.org/Wiki/CMake:Component_Install_With_CPack | 21:51 |
| lisitsyn | wiking: checking | 21:52 |
| @wiking | lisitsyn: its really cool. with the current structure of cmake i can easily create different components, i.e. packages like deb, rpm for the modular interfaces | 21:53 |
| shogun-buildbot | build #1437 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1437 blamelist: Evgeniy Andreev <gsomix@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com> | 21:53 |
| lisitsyn | wiking: well easily? | 21:54 |
| lisitsyn | ;) | 21:54 |
| lisitsyn | I am usually quite stucked with that shit | 21:54 |
| @wiking | lisitsyn: yeah easily since i just have to add one extra line into INSTALL(...) lines (COMPONENT python_modular....) | 21:55 |
| @wiking | and after that i we just have to define what kind of cpack generator we want to use | 21:55 |
| @wiking | like deb, rpm, tar.gz, tar.bz2 etc. | 21:55 |
| @wiking | good shit ;) | 21:56 |
| @wiking | and after this we just have a new build target: make package | 21:56 |
| @wiking | and that'll generate the packages ;P | 21:56 |
| lisitsyn | wiking: yeah that's cool indeed | 21:56 |
| @iglesiasg | wiking: magic! | 21:59 |
| @wiking | yeah it's all fucking magic with cmake :) | 21:59 |
| @wiking | although one big target is still missing from the current setup | 22:00 |
| @wiking | make tests | 22:00 |
| @wiking | :D | 22:00 |
| @wiking | the rest is solved | 22:00 |
| @wiking | although a rebase will give me some headache | 22:01 |
| @wiking | ok back to finish up make tests :) | 22:03 |
| shogun-notifier- | shogun: Viktor Gal :feature/CMake * ccdd072 / / (5 files): https://github.com/shogun-toolbox/shogun/commit/ccdd0726c6e8db177c3c1a36e9860e8044f444de | 22:11 |
| shogun-notifier- | shogun: Add FindRubyNArray and fix octave build on travis | 22:11 |
| -!- pickle27 [~Kevin@d67-193-243-174.home3.cgocable.net] has joined #shogun | 22:16 | |
| @sonney2k | wiking, yeah that won't work for debian packages but sure for pure data containers it would | 22:47 |
| @sonney2k | gsomix, well eah | 22:48 |
| @sonney2k | yeah | 22:48 |
| @wiking | sonney2k: ? | 23:01 |
| @wiking | sonney2k: why wouldn't it work? | 23:01 |
| @wiking | sonney2k: i mean i get it that we have a compilation size problem to get the debian packages into the debian upstream but hack we still can provide the deb packages ourselves... same with rpm | 23:07 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9657913 | 23:13 |
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| @sonney2k | wiking, the biggest issue w/ creating a .deb / rpm is to have a proper license file, dependencies complete and use the native build system (of e.g. dh_python2 in debian) - so you manually need to write some control, rules and, copyright file | 23:27 |
| shogun-buildbot | build #1436 of deb3 - modular_interfaces is complete: Failure [failed test python_modular] Build details are at http://www.shogun-toolbox.org/buildbot/builders/deb3%20-%20modular_interfaces/builds/1436 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 23:28 |
| @wiking | sonney2k: dude have u read the wiki? | 23:29 |
| @wiking | sonney2k: cpack generates most of the files for u | 23:29 |
| @wiking | and uses native tools | 23:29 |
| @wiking | hence i cannot generate deb packages with cmake on my osx | 23:29 |
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| @sonney2k | argh somebody broke gaussianprocessregression | 23:38 |
| @sonney2k | ...in modular interfaces | 23:38 |
| @wiking | sonney2k: i.e. i've just created a shogun.dmg with it and it used the native PackageMaker of OSX | 23:42 |
| @wiking | so it's pretty cool | 23:42 |
| @sonney2k | wiking, sounds like! | 23:42 |
| @sonney2k | wiking, that certainly would solve the complaints we were hearing at the WS | 23:43 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * d6b980e / src/interfaces/modular/GaussianProcess.i: https://github.com/shogun-toolbox/shogun/commit/d6b980eee9055cc9875c104236920789133f4dd3 | 23:44 |
| shogun-notifier- | shogun: fix gp regression for modular interfaces | 23:44 |
| @wiking | sonney2k: http://www.cmake.org/Wiki/CMake:CPackPackageGenerators#DEB_.28UNIX_only.29 | 23:50 |
| @wiking | if u r interested | 23:50 |
| @sonney2k | wiking, I don't think it will work with e.g python but libshogun sure | 23:53 |
| @wiking | sonney2k: why not? | 23:54 |
| @sonney2k | wiking, look at the current debian package | 23:56 |
| @sonney2k | it is not that trivial | 23:56 |
| @sonney2k | wiking, https://bollin.googlecode.com/svn/shogun/trunk/debian/ | 23:57 |
| @sonney2k | alright the build should go green now and it is time to sleep for me | 23:57 |
| shogun-buildbot | build #1127 of cyg1 - libshogun is complete: Failure [failed compile] Build details are at http://www.shogun-toolbox.org/buildbot/builders/cyg1%20-%20libshogun/builds/1127 blamelist: Soeren Sonnenburg <sonne@debian.org> | 23:57 |
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| travis-ci | [travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/9661598 | 23:58 |
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| --- Log closed Wed Jul 31 00:00:54 2013 | ||
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