| --- Log opened Fri Sep 27 00:00:06 2013 | ||
| --- Day changed Fri Sep 27 2013 | ||
| wiking | sonney2k ok then it's weird ... as CGradientModelSelection depends on NLOPT | 00:00 |
|---|---|---|
| wiking | sonney2k: but maybe it doesn't have the right version yet... as i needed to edit class_list.cpp.py | 00:00 |
| wiking | and i dont know when was that commit | 00:00 |
| @sonney2k | wiking, ok maybe | 00:02 |
| @sonney2k | shogun-buildbot, force build nightly_default | 00:02 |
| shogun-buildbot | The build has been queued, I'll give a shout when it starts | 00:02 |
| @sonney2k | shogun-buildbot, force build --branch=develop nightly_default | 00:02 |
| @sonney2k | *sigh* | 00:02 |
| shogun-buildbot | The build has been queued, I'll give a shout when it starts | 00:02 |
| @HeikoS | wiking: we want to drop NLOPT soon | 00:05 |
| @HeikoS | wiking: what was done to the unit-tests? some of them take so long when running make test now? | 00:06 |
| wiking | eh? | 00:06 |
| wiking | i havent touched utests | 00:06 |
| @sonney2k | wiking, this one looks good http://shogun-toolbox.org/static/notebook/bss_jade.html | 00:06 |
| wiking | sonney2k: noup | 00:07 |
| wiking | it's not | 00:07 |
| @sonney2k | wiking, shift reload | 00:07 |
| wiking | ok getting there... | 00:07 |
| wiking | ;P | 00:07 |
| @HeikoS | wiking: so make test basically takes ages to run the unit tests, make unit-tests doesnt, any ideas why that is? | 00:08 |
| @sonney2k | hushell, for some reason your FGM still fails :/ | 00:09 |
| @sonney2k | don't know why | 00:09 |
| @sonney2k | http://shogun-toolbox.org/static/notebook/FGM.html | 00:09 |
| @sonney2k | data is there | 00:09 |
| wiking | HeikoS: ctest -R unit | 00:10 |
| @sonney2k | hushell, what is this bmrm.p ? and bmrm_stats.p ? | 00:10 |
| @sonney2k | hushell, ahh how long does training take? | 00:11 |
| wiking | sonney2k: it's libbmrm stuff | 00:11 |
| @sonney2k | anything above 20s will be killed | 00:11 |
| @sonney2k | that might explain it... | 00:11 |
| wiking | hehehe | 00:12 |
| wiking | that's for sure not enough | 00:12 |
| @sonney2k | wiking, what is? | 00:12 |
| @sonney2k | let me put 300s there | 00:12 |
| wiking | 20s | 00:12 |
| @sonney2k | more is not accepable | 00:12 |
| wiking | why not? | 00:12 |
| wiking | it's a noteok | 00:12 |
| wiking | notebook note a test script | 00:13 |
| @sonney2k | wiking, so you want someone to watch how the notebook is constructed for > 5 mins? | 00:13 |
| wiking | no | 00:13 |
| wiking | but this is generated nightly | 00:14 |
| wiking | so who the fuck cares if it takes more than 5 mins | 00:14 |
| wiking | if it's compiled once you dont need no 5 mins to watch it | 00:14 |
| wiking | (see generated ipynb and html) | 00:14 |
| @HeikoS | wiking, sonney2k what about having a seperate test branch for long-term tests=? | 00:15 |
| wiking | HeikoS: not maintainable | 00:15 |
| @HeikoS | some tests just take time to check accuracy or similar | 00:15 |
| @sonney2k | wiking, we run this nightly! | 00:15 |
| @HeikoS | so rather shorten them and make sure that things are accurate otherwise? | 00:15 |
| wiking | sonney2k: and nightly an extra 5 mins is a lot? | 00:15 |
| @sonney2k | HeikoS, yes makes sense - maybe we flag them _slow or so in the filename? | 00:15 |
| @HeikoS | sonney2k: and run only nightly or so | 00:16 |
| @sonney2k | HeikoS, yeah | 00:16 |
| @sonney2k | wiking, per example! | 00:16 |
| @sonney2k | think 100 examples | 00:16 |
| wiking | sonney2k: and? | 00:16 |
| @HeikoS | what about having a limit of 5 mins for notebooks? | 00:16 |
| wiking | first: i really dont see us having 100 notebooks anywhere in the future | 00:16 |
| @sonney2k | wiking, > 8 hrs?!? | 00:16 |
| @sonney2k | wiking, I do | 00:17 |
| wiking | second you can easily run those notebooks parallel | 00:17 |
| @sonney2k | notebooks are fun to do so we will have plenty | 00:17 |
| wiking | so with 4 cores it's already just about 2 hours | 00:17 |
| wiking | ;) | 00:17 |
| @sonney2k | wiking, not on this machine | 00:17 |
| @sonney2k | it is weak | 00:17 |
| @HeikoS | currently we only have a few notebooks | 00:17 |
| wiking | sonney2k: yeah but those could be run anywhere | 00:17 |
| @HeikoS | so 5 mins should be fine right? | 00:17 |
| @sonney2k | we then need to do this on fatbot and transfer stuff over | 00:17 |
| wiking | sonney2k: it's no problem | 00:18 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11833781 | 00:18 |
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| wiking | sonney2k: i told you the simple command for transfering dirs with buildbot | 00:18 |
| wiking | so really a 5 minutes running time for a notebook shouldn't be a problem | 00:19 |
| wiking | we have like max 8 notebooks atm | 00:19 |
| wiking | and one of them takes longer than coupld of seconds to run | 00:19 |
| wiking | so having 1-2 notebooks that is over 3 minutes | 00:19 |
| wiking | is totally ok imho | 00:19 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 9bd3ef1 / examples/undocumented/python_modular/ (3 files): https://github.com/shogun-toolbox/shogun/commit/9bd3ef13f2c25a8cd274693f17bf35ca97a8b3c5 | 00:20 |
| shogun-notifier- | shogun: reduce number of x-validation repeats and number of parameter combinations in grid-search | 00:20 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * 7f21c9b / examples/undocumented/python_modular/mathematics_logdet.py: https://github.com/shogun-toolbox/shogun/commit/7f21c9b0f748f8e273c8bd10ea9f21ef43c02c46 | 00:20 |
| shogun-notifier- | shogun: decreased number of iterations to make test run faster | 00:20 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * f607173 / examples/undocumented/python_modular/ (4 files): https://github.com/shogun-toolbox/shogun/commit/f607173050485950fc46ef6949d25053f3a1d706 | 00:20 |
| shogun-notifier- | shogun: Merge pull request #1681 from karlnapf/develop | 00:20 |
| shogun-notifier- | shogun: | 00:20 |
| shogun-notifier- | shogun: speed ups for tests | 00:20 |
| wiking | HeikoS: mmm | 00:27 |
| wiking | /home/wiking/shogun/examples/undocumented/python_modular/modelselection_grid_search_krr_modular.py | 00:27 |
| wiking | still running for more than a minute now | 00:27 |
| wiking | but maybe it's my fault | 00:27 |
| wiking | just a sec | 00:27 |
| * sonney2k off | 00:28 | |
| shogun-notifier- | shogun: Heiko Strathmann :develop * dc4786b / doc/ipython-notebooks/ (2 files): https://github.com/shogun-toolbox/shogun/commit/dc4786bf950d34a761eaeca9b32320311bdeb15a | 00:28 |
| shogun-notifier- | shogun: removed notebooks since there will be a more complete one soon | 00:28 |
| wiking | mmm | 00:28 |
| @HeikoS | wiking: maybe its just slow | 00:28 |
| wiking | HeikoS: used to be faster | 00:28 |
| @HeikoS | it should be like at least 10 times faster now | 00:28 |
| @HeikoS | sonney2k: remove the gp notebooks, bye! | 00:29 |
| wiking | it doesn't return | 00:29 |
| @HeikoS | sonney2k: removed | 00:29 |
| wiking | 303/534 Test #300: integration-python_modular-tester-modelselection_grid_search_krr_modular ............................................................ Passed 1.08 sec | 00:30 |
| wiking | in the past | 00:30 |
| shogun-buildbot | build #1901 of deb3 - modular_interfaces is complete: Failure [failed test python modular] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1901 blamelist: Viktor Gal <viktor.gal@maeth.com> | 00:30 |
| shogun-buildbot | build #537 forced | 00:30 |
| shogun-buildbot | I'll give a shout when the build finishes | 00:30 |
| @HeikoS | wiking: ? | 00:30 |
| @HeikoS | ah | 00:30 |
| wiking | 519/534 Test #763: python_modular-modelselection_grid_search_krr_modular ............................................................................... Passed 0.61 sec | 00:30 |
| wiking | now | 00:30 |
| wiking | it doesn't fucking return | 00:30 |
| @HeikoS | wiking: debug/release stuff | 00:30 |
| wiking | it's just running forever | 00:30 |
| @HeikoS | wiking: the unit tests also take *much* longer when running with ctest | 00:30 |
| @HeikoS | compare make unit-tests to make test times | 00:30 |
| wiking | HeikoS: ?! | 00:31 |
| wiking | whaaat? | 00:31 |
| wiking | ah man | 00:31 |
| shogun-buildbot | build #537 of nightly_default is complete: Failure [failed configure] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/537 | 00:31 |
| shogun-buildbot | build #538 forced | 00:31 |
| shogun-buildbot | I'll give a shout when the build finishes | 00:31 |
| wiking | of course it does | 00:31 |
| wiking | becuase it's completely differnet setup | 00:31 |
| @HeikoS | well ok | 00:31 |
| wiking | shouldn't compare the two | 00:32 |
| wiking | when u do make unit-test | 00:32 |
| wiking | it basically runs ./tests/unit/shogun-unit-test | 00:32 |
| wiking | but if u run ctest -R unit | 00:32 |
| wiking | that'll run | 00:32 |
| wiking | ./tests/unit/shogun-unit-test --gtest_filter=SOMETHING.* | 00:32 |
| wiking | and it'll run that as many <SOMETHING>s are | 00:33 |
| wiking | this way you get a better idea which unit test actually failed + ctest invoked valgrind is more understandable as well | 00:34 |
| @HeikoS | wiking: I see, thanks for the explanation | 00:34 |
| wiking | but this shit is oooold | 00:34 |
| wiking | at least a week old :P | 00:34 |
| @HeikoS | hehe, I am in holidays ;) | 00:34 |
| @HeikoS | currently writing the GP notebook, quite fun | 00:35 |
| @HeikoS | to create these notebooks | 00:35 |
| @HeikoS | see what one can do with shogun | 00:35 |
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| @HeikoS | wiking: and teaches me one thing: when you think something works (compiled/tested/bla) then trying to use it on some real problem is a totally different thing. Bugs bugs bugs bugs | 00:36 |
| shogun-buildbot | build #44 of debian wheezy - memcheck is complete: Success [build successful] Build details are at http://buildbot.shogun-toolbox.org/builders/debian%20wheezy%20-%20memcheck/builds/44 | 00:36 |
| wiking | HeikoS: :D | 00:36 |
| @HeikoS | wiking: btw how do you run the notebook server? | 00:37 |
| @HeikoS | wiking: with --pylab inline? | 00:37 |
| @HeikoS | or do I have to do this on my own? | 00:37 |
| wiking | i've put this into the profile conf | 00:40 |
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| wiking | c.IPKernelApp.pylab = 'inline' | 00:41 |
| shogun-buildbot | build #53 of clang34 - static analysis is complete: Failure [failed analyse] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/53 blamelist: Viktor Gal <viktor.gal@maeth.com> | 00:43 |
| @HeikoS | wiking: what do you think about the idea of getting a sponsor to pay someone to do a GSoC like thing for us? | 00:49 |
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| shogun-buildbot | build #35 of clang34 - undefined behaviour analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/35 blamelist: Viktor Gal <viktor.gal@maeth.com> | 00:59 |
| wiking | HeikoS: yeah totally | 01:04 |
| wiking | HeikoS: i'm free ;) get a sponsor :P | 01:04 |
| @HeikoS | wiking: I mean imagine how many cool things we could do ;) | 01:04 |
| wiking | yeah i know | 01:05 |
| @HeikoS | wiking: the thing is it is quite some work to make this happen | 01:05 |
| @HeikoS | so its only intersting if we really want that | 01:05 |
| @HeikoS | interesting | 01:05 |
| @HeikoS | need some stuff to show | 01:05 |
| wiking | i mean after the release i hope i can start again doing some more interesting stuff and not this tidious pre-release cleanup shit | 01:05 |
| @HeikoS | otherwise no-one will bother | 01:05 |
| @HeikoS | wiking: I think the clean up stuff is quite important | 01:05 |
| wiking | yeah | 01:05 |
| wiking | but it's really getting on my nerves | 01:06 |
| @HeikoS | understanable | 01:06 |
| wiking | i'm excited about 3.0 so i'm pushing it | 01:06 |
| @HeikoS | man | 01:06 |
| @HeikoS | understandable | 01:06 |
| wiking | but i hope that i can shift my commits to more interesting stuff ;P | 01:06 |
| wiking | oh btw | 01:06 |
| @HeikoS | I am really excited about making shogun more accessible | 01:06 |
| wiking | i need to run something on a cluster | 01:06 |
| @HeikoS | ah cool | 01:06 |
| wiking | i'll try your stuff | 01:07 |
| wiking | but i think i'll have to write an opensource backend | 01:07 |
| wiking | if this works out | 01:07 |
| wiking | then we have another very complex example for latent svm | 01:07 |
| wiking | ;) | 01:07 |
| wiking | latentSOSVM | 01:07 |
| wiking | but that is certainly not an ipython notebook demo :P | 01:07 |
| wiking | as it really takes like a day to train the model :P | 01:08 |
| @HeikoS | oh wow | 01:08 |
| @HeikoS | wiking: yeah let me know whether this independent computation thing works for you | 01:08 |
| @HeikoS | wiking: for me it does it job nicely | 01:08 |
| wiking | HeikoS: we'll see | 01:09 |
| @HeikoS | wiking: but I heavily use pickle | 01:09 |
| wiking | HeikoS: i'm wondering about sponsors though | 01:09 |
| @HeikoS | and I did some nastly hacks | 01:09 |
| wiking | HeikoS: i rather imagine we start doing ML consulting :P | 01:09 |
| @HeikoS | wiking: yeah thats one thing i also had in mind | 01:09 |
| @HeikoS | wiking: open-source ML software + how-to use it properly | 01:10 |
| shogun-buildbot | build #38 of clang34 - thread analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/38 blamelist: Viktor Gal <viktor.gal@maeth.com> | 01:17 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11833781 | 01:18 |
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| wiking | HeikoS: https://travis-ci.org/shogun-toolbox/shogun/jobs/11842892 | 01:22 |
| wiking | modelselection_grid_search_krr_modular | 01:22 |
| shogun-buildbot | build #538 of nightly_default is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/538 | 01:22 |
| wiking | has there been changes lately in model selection | 01:22 |
| wiking | i really wonder why it started to do this | 01:23 |
| @HeikoS | roman changed some things | 01:23 |
| wiking | it was working fine before | 01:23 |
| @HeikoS | few days ago | 01:23 |
| @HeikoS | checking | 01:23 |
| @HeikoS | wiking: https://travis-ci.org/shogun-toolbox/shogun/builds/11631291 | 01:25 |
| @HeikoS | last green travis | 01:25 |
| @HeikoS | 219 Test #172: python_modular-modelselection_grid_search_krr_modular ...................... Passed 2.07 sec | 01:25 |
| @HeikoS | wiking: I think he broke it | 01:27 |
| @HeikoS | ah it was his 76 files changed PR | 01:28 |
| @iglesiasg | good night guys | 01:38 |
| @iglesiasg | I've got an interview tom, so wish me luck! :) | 01:38 |
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| shogun-buildbot | build #54 of clang34 - static analysis is complete: Failure [failed analyse] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/54 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 02:03 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11842889 | 02:24 |
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| shogun-notifier- | shogun: Heiko Strathmann :gp_notebook * 23a9df9 / doc/ipython-notebooks/gaussian_process/gaussian_process_classification.ipynb: https://github.com/shogun-toolbox/shogun/commit/23a9df9d58a56da1ff8cab9cade802910d0c11f5 | 02:38 |
| shogun-notifier- | shogun: FITC sparse regression paragraph | 02:38 |
| shogun-buildbot | build #55 of clang34 - static analysis is complete: Failure [failed analyse] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/55 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 02:43 |
| shogun-notifier- | shogun: Heiko Strathmann :gp_notebook * 3049cbb / doc/ipython-notebooks/gaussian_process/ (2 files): https://github.com/shogun-toolbox/shogun/commit/3049cbb25cbdcb1890a2a8dafda826e68c5f6597 | 02:45 |
| shogun-notifier- | shogun: renamed file | 02:45 |
| shogun-buildbot | build #36 of clang34 - undefined behaviour analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/36 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 02:53 |
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| shogun-buildbot | build #39 of clang34 - thread analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/39 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 03:08 |
| shogun-buildbot | build #468 of nightly_all is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_all/builds/468 | 03:24 |
| shogun-buildbot | build #539 of nightly_default is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/539 | 03:46 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11843187 | 04:19 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11846146 | 05:01 |
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| travis-ci | [travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11846269 | 05:58 |
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| gsomix | good morning | 08:07 |
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| wiking | sonne|work: ok i've figured out the problem with some of the notebook generations | 09:23 |
| wiking | export LD_LIBRARY_PATH="`pwd`/build_install/lib:$LD_LIBRARY_PATH" | 09:24 |
| wiking | export PYTHONPATH="`pwd`/build_install/lib/python2.7/dist-packages:$PYTHONPATH" | 09:24 |
| wiking | but in the nightly | 09:24 |
| wiking | -- Installing: /home/buildslave/nightly_default/build/build/build/lib/python2.7/dist-packages/shogun/__init__.py | 09:24 |
| wiking | so i'll change this now | 09:24 |
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| wiking | shogun-toolbox: force build --branch=develop 'nightly_default' | 09:26 |
| wiking | shogun-buildbot: force build --branch=develop 'nightly_default' | 09:26 |
| shogun-buildbot | build #540 forced | 09:26 |
| shogun-buildbot | I'll give a shout when the build finishes | 09:26 |
| sonne|work | wiking: ahh ok | 09:43 |
| sonne|work | gsomix: moin moin | 09:44 |
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| sonne|work | foulwall: hey foulwal! | 09:44 |
| sonne|work | foulwall ^ | 09:44 |
| wiking | sonne|work: hehe there's something seriously wrong with the cygwin bot | 09:48 |
| wiking | sonne|work: Elapsed18 hrs, 2 mins, 36 secs | 09:48 |
| wiking | 18 hours :P | 09:48 |
| sonne|work | wiking: give me gdb and I fixed it | 09:48 |
| sonne|work | ohh man | 09:48 |
| wiking | and that's compiling | 09:48 |
| sonne|work | that is broken beyond repair | 09:48 |
| wiking | now test | 09:48 |
| wiking | *not test | 09:48 |
| wiking | sonne|work: cant u install ccache on cygwin (once you have access to it) | 09:49 |
| sonne|work | wiking: it is installed! | 09:50 |
| wiking | ah woah yes | 09:50 |
| wiking | and it even found it | 09:50 |
| wiking | mmm | 09:50 |
| wiking | i guess then maybe the cache is tained or something :P | 09:50 |
| shogun-buildbot | build #540 of nightly_default is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/540 | 09:57 |
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| wiking | shogun-buildbot: force build --branch=develop 'nightly_default' | 10:00 |
| shogun-buildbot | build #541 forced | 10:00 |
| shogun-buildbot | I'll give a shout when the build finishes | 10:00 |
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| sonne|work | wiking: but the notebook traceback looks cool now doesn't it :) | 10:21 |
| wiking | sonne|work: yeah :) but it still failing... hope this rebuild will fix it | 10:22 |
| sonne|work | wiking: what is this shogun crap | 10:32 |
| sonne|work | running /home/buildslave/nightly_default/build/doc/ipython-notebooks/statistics/mmd_two_sample_testing.ipynb | 10:32 |
| sonne|work | Failed to run cell: | 10:32 |
| sonne|work | from shogun.Features import RealFeatures | 10:32 |
| sonne|work | from shogun.Kernel import GaussianKernel, CustomKernel | 10:32 |
| sonne|work | ... | 10:32 |
| sonne|work | this notebook needs to use modshogun | 10:33 |
| wiking | mmm wtf | 10:33 |
| wiking | i dont understand this | 10:33 |
| sonne|work | wiking: can we please kill the shogun emulation | 10:33 |
| wiking | PYTHONPATH=`pwd`/build/build/lib/python2.7/dist-packages: | 10:33 |
| shogun-buildbot | build #541 of nightly_default is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/541 | 10:33 |
| wiking | emulation? | 10:33 |
| wiking | ah yeah no it's not the problem atm | 10:33 |
| sonne|work | well it should be from modshogun import FOO | 10:33 |
| sonne|work | true | 10:33 |
| sonne|work | the modshogun stuff fails too | 10:33 |
| wiking | ImportError Traceback (most recent call last)<ipython-input-2-da8b46f88d7c> in <module>() | 10:33 |
| wiking | ----> 1 from modshogun import StringCharFeatures, RAWBYTE, HashedDocDotFeatures, NGramTokenizer | 10:33 |
| wiking | ImportError: No module named modshogun | 10:34 |
| sonne|work | wiking: btw you can test if it works by just running | 10:34 |
| sonne|work | /usr/local/bin/update_* | 10:34 |
| wiking | sonne|work: yeah i know | 10:34 |
| sonne|work | from the buildslave account | 10:34 |
| wiking | i'm just wondering why it does not fucking work | 10:34 |
| sonne|work | so no need to run the whole nightly_default | 10:34 |
| sonne|work | I only tested with deb3 python modular | 10:34 |
| sonne|work | seems like BB configs are different | 10:34 |
| sonne|work | foulwall: do you need help or does it work now with the import? | 10:35 |
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| wiking | hushell: hy here? | 11:01 |
| hushell | wiking: hey | 11:01 |
| wiking | hushell: on your machine how long did it take to run FGM.ipynb | 11:01 |
| wiking | roughly | 11:02 |
| hushell | more than 20 mins | 11:02 |
| wiking | oh i see :) | 11:02 |
| wiking | sonne|work: ^ | 11:02 |
| wiking | :D | 11:02 |
| wiking | i'll have to adapt this to fatbot | 11:02 |
| hushell | BMRM took 547.777660847 seconds + SGD took 456.158573866 seconds | 11:03 |
| hushell | wiking: but I used pickle to save the models, so 2nd run shouldn't be costly | 11:04 |
| hushell | wiking: one thing I noticed: integration tests are slower, each of them takes more than 90s, there are how many such tests roughly? | 11:07 |
| sonne|work | hushell: what kind of machine did you use | 11:11 |
| sonne|work | wiking: that is a lot! | 11:11 |
| sonne|work | hushell: caching is not used on buildbots so... | 11:12 |
| wiking | hushell: that's fixed... although there's one problem still with gridsearch... | 11:12 |
| wiking | sonne|work: will fix it | 11:12 |
| sonne|work | wiking: fix what? | 11:12 |
| wiking | sonne|work: running time.. | 11:13 |
| sonne|work | how? | 11:13 |
| wiking | dont worry | 11:14 |
| wiking | will fix it | 11:14 |
| wiking | concentrate on other stuff | 11:14 |
| hushell | sonne|work: Intel(R) Core(TM) i5-3317U CPU @ 1.70GHz x 4, Mem 6GB, Ubuntu 12.04 | 11:15 |
| sonne|work | hushell: might be a bit faster then on fatbot | 11:16 |
| hushell | it's acceptable in my laptop, how long it takes on buildbots? | 11:17 |
| sonne|work | no idea | 11:19 |
| sonne|work | hushell: we had a time limit of 20s | 11:20 |
| sonne|work | hushell: now 300s | 11:20 |
| sonne|work | but likely not sufficient | 11:20 |
| wiking | bbl | 11:20 |
| hushell | sonne|work: the new version takes longer :/ | 11:20 |
| wiking | hushell: ? | 11:20 |
| wiking | hushell: you mean the integration test? | 11:21 |
| wiking | hushell: as there has been no change in SOSVM and stuff.. | 11:21 |
| hushell | because now I am using two solvers, so double training time | 11:21 |
| wiking | ah you mean SOSGD? | 11:21 |
| sonne|work | hushell: in the same notebook? | 11:21 |
| wiking | hushell: have u tested NCBM for CDualLibQPBMSOSVM | 11:21 |
| wiking | ? | 11:21 |
| hushell | wiking: yeah, integration tests are slow, I run it for 1 hour, but only finished 100 tests | 11:22 |
| wiking | hushell: ignore integration tests | 11:22 |
| wiking | hushell: they just got partially fixed yesterday | 11:22 |
| wiking | hushell: and there's still one integration test that basically goes into infinte loop | 11:22 |
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| shogun-notifier- | shogun: lambday :develop * 0486ff3 / tests/unit/mathematics/linalg/ (2 files): https://github.com/shogun-toolbox/shogun/commit/0486ff3032e4e17593d954b1399d1ae440a2052a | 11:22 |
| shogun-notifier- | shogun: reduced size and accuracy for speeding up unit-tests | 11:22 |
| shogun-notifier- | shogun: lambday :develop * 392bffc / src/shogun/mathematics/linalg/linsolver/IterativeShiftedLinearFamilySolver.h: https://github.com/shogun-toolbox/shogun/commit/392bffccf620665444abcd6a7d5ca99ad0f3211b | 11:22 |
| shogun-notifier- | shogun: minor documentation correction | 11:22 |
| shogun-notifier- | shogun: Soeren Sonnenburg :develop * 608b7e5 / / (3 files): https://github.com/shogun-toolbox/shogun/commit/608b7e54d6c8cc7b0630380087af4a575b6886dd | 11:22 |
| shogun-notifier- | shogun: Merge pull request #1683 from lambday/develop | 11:22 |
| shogun-notifier- | shogun: | 11:22 |
| wiking | so ignore that for now | 11:22 |
| hushell | yeah, I compared bmrm with sgd | 11:22 |
| shogun-notifier- | shogun: reduced size and accuracy for speeding up unit-tests | 11:22 |
| wiking | hushell: no | 11:22 |
| wiking | hushell: CDualLibQPBMSOSVM with NCBM | 11:22 |
| hushell | ncbm is better than bmrm? | 11:23 |
| wiking | hushell: so when u construct CDualLibQPBMSOSVM | 11:23 |
| sonne|work | hushell: so which one wins? | 11:23 |
| wiking | then before doing anything | 11:23 |
| hushell | SGD is winning, http://nbviewer.ipython.org/6579472 | 11:23 |
| wiking | hushell: CDualLibQPBMSOSVM.set_solver(NCBM) | 11:23 |
| wiking | please try to run this way once | 11:24 |
| hushell | wiking: I haven't tested all of them, I see there are a couple of solvers | 11:24 |
| hushell | wiking: so which one is best in your experience? | 11:24 |
| wiking | hushell: ncbm is very different from the others | 11:25 |
| wiking | hushell: you could try P3BMRM but you need parameter tuning there.. | 11:25 |
| hushell | wiking: okay, this seems necessary | 11:25 |
| wiking | hushell: but P3BMRM with right parameters usually is heaps better than simple BMRM | 11:25 |
| wiking | hushell: but just test NCBM with the same params | 11:25 |
| wiking | just use NCBM as solver... | 11:25 |
| wiking | i'm really curious about it's performance | 11:26 |
| sonne|work | hushell: interesting - would not have expected that. I guess your iterations are rather cheap but not the optimization steps | 11:26 |
| hushell | wiking: I could run all of them and see what happened :) | 11:26 |
| hushell | I read the BMRM paper, only few differences in fact, but the NCBM seems quite different | 11:27 |
| hushell | sonne|work: yeah, SGD update w for each example, the cutting plane based methods have to reoptimize with all previous constraints, but which better, is a question | 11:29 |
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| sonne|work | hushell: I would have expected that the number of iterations of BMRM is *much* less | 11:30 |
| sonne|work | hushell: with optimization time being higher | 11:30 |
| hushell | sonne|work: I didn't understand the convergence analysis part thoroughly, you will be interested in Table 1 of this paper : http://www.pletscher.org/papers/lacostejulien2013fwstruct.pdf | 11:32 |
| sonne|work | hushell: too bad we don't have this one ... it seems even much faster | 11:35 |
| sonne|work | bcfw-wavg | 11:35 |
| hushell | wiking: I'll you know the results of comparison experiment, maybe tomorrow night | 11:35 |
| lisitsyn1 | hey there | 11:35 |
| hushell | sonne|work: this is what I am going to do this weekend :) | 11:35 |
| -!- lisitsyn1 is now known as lisitsyn | 11:35 | |
| sonne|work | hushell: cool! | 11:36 |
| hushell | sonne|work: it was included in gsoc plan, but I was too slow :( | 11:36 |
| sonne|work | hushell: well you did a lot | 11:36 |
| sonne|work | and post gsoc you can do as much as you want with no deadline or anything in the back | 11:37 |
| sonne|work | much more relaxed this wya | 11:37 |
| sonne|work | way | 11:37 |
| hushell | yeah, looking forward to finish all tasks :D | 11:38 |
| hushell | I'll try to send a PR every one or two weeks | 11:38 |
| hushell | going to bed now, talk you later | 11:39 |
| sonne|work | hushell: cu! | 11:40 |
| lisitsyn | HeikoS: sonne|work: ipython keeps receiving enormous amounts of money :D | 11:47 |
| lisitsyn | sonne|work: wiking: doodle please | 11:55 |
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| sonne|work | lisitsyn: which dodole? | 12:01 |
| sonne|work | lisitsyn: sure makes sense it is crazy sexy cool | 12:01 |
| -!- new_lido [~walid@41.218.173.234] has quit [Quit: Leaving] | 12:03 | |
| lisitsyn | sonne|work: ahh you don't receive mails? | 12:10 |
| lisitsyn | sonne|work: http://doodle.com/rgpvdife4s78bnkh this one | 12:10 |
| shogun-buildbot | build #56 of clang34 - static analysis is complete: Failure [failed analyse] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/56 blamelist: lambday <heavensdevil6909@gmail.com> | 12:49 |
| shogun-buildbot | build #37 of clang34 - undefined behaviour analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/37 blamelist: lambday <heavensdevil6909@gmail.com>, Soeren Sonnenburg <sonne@debian.org> | 13:00 |
| shogun-buildbot | build #40 of clang34 - thread analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/40 blamelist: lambday <heavensdevil6909@gmail.com>, Soeren Sonnenburg <sonne@debian.org> | 13:15 |
| sonne|work | lisitsyn: as usual I am utterly confused about time zones and what this is about? | 13:20 |
| lisitsyn | sonne|work: a) I set it to berlin but it should be shown b) it is dev meeting | 13:27 |
| lisitsyn | b) cont'd - about release mainly | 13:27 |
| sonne|work | HeikoS: well we need to be a e.V. to get money and for sure not from M$ - we are OSS and not MSS | 13:36 |
| besser82 | sonne|work: you need $ for what? Maybe I can help.... | 13:36 |
| sonne|work | besser82: no idea - the others are talking about $ | 13:37 |
| sonne|work | so fear gsoc money helped very much with paying rent for the servers though | 13:37 |
| besser82 | sonne|work: if it's about servers I can helpout with f-i :D | 13:37 |
| besser82 | sonne|work: And who was talking about $? can't find any in history :( | 13:38 |
| sonne|work | besser82: heh well developers is what we need most imho though | 13:39 |
| sonne|work | one cannot have too many I would say | 13:39 |
| besser82 | sonne|work: that's true ;) | 13:39 |
| besser82 | sonne|work: but if it's about servers / appliances and such, I can get some for you paid by redhat ;) | 13:40 |
| sonne|work | besser82: well I would feel more comfortable to run the demos / ipython notebook vms on a different machine than the buildbot / webserver | 13:42 |
| sonne|work | but IMHO doing it on the buildbot aka fatbot is sufficient (for now) | 13:42 |
| besser82 | sonne|work: that's what HeikoS said as well ;) For this I'm already in talks with Kevin Fenzi (f-i master mind) to setup a cloud-appliance for you ;) | 13:43 |
| sonne|work | for all the rest the only thing I can imagine we need money for is to meet 1-2 times a year | 13:43 |
| besser82 | sonne|work: I can look if I could do sth. there ;) | 13:44 |
| besser82 | sonne|work: Like a workshop on Flock e.g. | 13:45 |
| besser82 | sonne|work: Flock visit is paid by redhat fully ;) | 13:45 |
| besser82 | sonne|work: So we I can arrange to get some room / time for ml-stuff centered around SHOGUN on those events | 13:46 |
| sonne|work | besser82: anyway I will share the plane trip with HeikoS to SFO and back so we can discuss plenty | 13:47 |
| sonne|work | alrighty work time! | 13:48 |
| shogun-buildbot | build #57 of clang34 - static analysis is complete: Failure [failed analyse] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/57 blamelist: lambday <heavensdevil6909@gmail.com>, Soeren Sonnenburg <sonne@debian.org> | 13:58 |
| besser82 | sonne|work: btw. don't want lobby or so. Just proposing possiblities.... | 14:01 |
| sonne|work | besser82: we will need your cmake file ... | 14:01 |
| besser82 | sonne|work: I'm on it ;) | 14:02 |
| lisitsyn | besser82: I would be really happy if we get funding for some meetings | 14:10 |
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| lisitsyn | it seems we lack it | 14:10 |
| besser82 | lisitsyn: Let me look what i can do ;) | 14:10 |
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| lisitsyn | besser82: ah btw do you have any webserver to share tapkee website? ;) | 14:11 |
| lisitsyn | of course I wouldn't mind to put fedora banner somewher | 14:11 |
| lisitsyn | e* | 14:11 |
| besser82 | lisitsyn: let me look if I can get some cloud-appliance ;) | 14:12 |
| besser82 | lisitsyn: powered by fedora-infra ;) | 14:12 |
| lisitsyn | besser82: I am now on free heroku | 14:12 |
| lisitsyn | well I used to employ digital ocean but I decided to save some money cause heroku works as well | 14:12 |
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| travis-ci | [travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/11857696 | 14:54 |
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| van51 | sonne|work: sonney2k: ping | 17:05 |
| -!- gsomix|classes is now known as gsomix | 17:16 | |
| gsomix | good evening | 17:16 |
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| wiking | hushell: ping? | 18:33 |
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| wiking | yoooohoooo | 18:40 |
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| shogun-notifier- | shogun: Roman Votyakov :develop * 5c44d11 / src/shogun/regression/KernelRidgeRegression.cpp: https://github.com/shogun-toolbox/shogun/commit/5c44d11914bffdc6c2888bd04dcd822bb9599565 | 18:53 |
| shogun-notifier- | shogun: set epsilon 1e-4 by default for krr | 18:53 |
| shogun-notifier- | shogun: Heiko Strathmann :develop * a1c0f00 / src/shogun/regression/KernelRidgeRegression.cpp: https://github.com/shogun-toolbox/shogun/commit/a1c0f00fb0030a6988b492b657b18f9eb0747253 | 18:53 |
| shogun-notifier- | shogun: Merge pull request #1685 from votjakovr/feature/gp_refactoring | 18:53 |
| shogun-notifier- | shogun: | 18:53 |
| shogun-notifier- | shogun: Set epsilon=1e-4 by default for krr | 18:53 |
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| @sonney2k | van51, pong | 19:39 |
| @sonney2k | wiking, any fixes wrt notebook generation? | 19:40 |
| van51 | sonney2k: hey! | 19:41 |
| van51 | sonney2k: I tried to re-run the experiments with the spectrum kernel using libsvm but I ran into some problems | 19:41 |
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| shogun-buildbot | build #1906 of deb3 - modular_interfaces is complete: Failure [failed test libshogun] Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1906 blamelist: Heiko Strathmann <heiko.strathmann@gmail.com> | 19:42 |
| van51 | sonney2k: first of all, the preprocessor wouldn't work with a dataset of 50k | 19:42 |
| van51 | sonney2k: so I switch it to on-the-fly preprocessing | 19:43 |
| van51 | sonney2k: but I got a seg fault and valgrind reported it in radix_sort | 19:43 |
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| wiking | sonney2k: yeah i'm notebook now again | 19:45 |
| wiking | sonney2k: writing NotebookManager for ipython :) | 19:45 |
| wiking | and i'll reconfig the buildbot to be able to run notebooks on a remote bot as well | 19:46 |
| wiking | (i.e. on fatbot | 19:46 |
| van51 | sonney2k: I'll also start to implement fast food | 19:46 |
| wiking | hehe | 19:52 |
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| wiking | http://www.picloud.com/pricing/ | 19:53 |
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| @sonney2k | wiking, you forgot the reconfig the bot | 19:55 |
| @sonney2k | config itself is OK! | 19:55 |
| @sonney2k | van51, it is too big indeed | 19:56 |
| @sonney2k | van51, you need to use 'linadd' which is only available with svmlight | 19:56 |
| wiking | sonney2k: ? | 19:56 |
| @sonney2k | wiking, make reconfig | 19:57 |
| wiking | sonney2k: why? | 19:57 |
| wiking | what did i change last tim? | 19:57 |
| @sonney2k | wiking, now the configure did add the right install path | 19:57 |
| @sonney2k | wiking, the path but forgot to reconfig | 19:57 |
| van51 | sonney2k: ok, w/ or w/o on-the-fly preprocessing? | 19:57 |
| @sonney2k | van51, you have to use the CommUlongStringKenrel and the SortU* preprocessor | 19:58 |
| @sonney2k | and yes apply() before training | 19:58 |
| van51 | sonney2k: yeah. I am using those | 19:58 |
| wiking | sonney2k: i would say lets provide notebook cloud, but with some kind fo a registartion method | 19:58 |
| wiking | sonney2k: let's say oauth2 and then u can login with facebook/googleacc/twitter? | 19:59 |
| wiking | ok? | 19:59 |
| @sonney2k | wiking, no idea what you are talking about... | 19:59 |
| wiking | sonney2k: notebook server | 19:59 |
| @sonney2k | wiking, I am trying to get the .html generated and on the website | 19:59 |
| van51 | sonney2k: thanks. I'll try again in a while | 19:59 |
| @sonney2k | wiking, ahh ok sure why not | 19:59 |
| wiking | sonney2k: and this way everybody has it's own home etc.... | 19:59 |
| @sonney2k | van51, could you please try with a very small data set? | 19:59 |
| wiking | and about sharing atm i really dont care :P | 20:00 |
| @sonney2k | wiking, and where is this run? | 20:00 |
| wiking | sonney2k: fatbot | 20:00 |
| wiking | for the moment | 20:00 |
| van51 | sonney2k: ok. give me a moment | 20:00 |
| wiking | no better place | 20:00 |
| wiking | if somebody gives us $$$ we move it to amazon ec2 | 20:00 |
| wiking | i can cut off the CPU time | 20:00 |
| @sonney2k | wiking, yeah well maybe besser82 can help out. if you intend to do it this big it might actually become popular | 20:00 |
| wiking | + memory | 20:00 |
| wiking | and if somebody wants to have something extra | 20:01 |
| wiking | then we'll think about how to fix | 20:01 |
| @sonney2k | van51, please post the code somewhere for me to look at | 20:01 |
| wiking | afaik this will not be big for the first couple of months | 20:01 |
| wiking | so we are on the save side ;P | 20:01 |
| van51 | sonney2k: let me convert it to use svmlight | 20:01 |
| @sonney2k | wiking, well it depends a lot on timing | 20:01 |
| wiking | and in the meanwhile we'll try to find a way how we can get some sponsors for hosting this somewhere else | 20:01 |
| besser82 | wiking, sonney2k: what's about me? | 20:01 |
| @sonney2k | wiking, look when I do a blog post it will be on planet.debian.org which is read by *many* people | 20:01 |
| @sonney2k | wiking, if we have the workshop videos on youtube | 20:02 |
| wiking | sonney2k: we'll have it no worries | 20:02 |
| wiking | (videos) | 20:02 |
| wiking | besser82: hosting ipython server :P | 20:02 |
| @sonney2k | wiking, and google also blogs about our gsoc experience | 20:02 |
| @sonney2k | and it is announced on G+ machine learning/big data etc etc | 20:02 |
| wiking | besser82: probably we are going to have problems with resources | 20:02 |
| @sonney2k | it surely will get plenty of hits | 20:02 |
| besser82 | wiking: I have already talked with HeikoS about that, I'm going to get some cloud appliance for it.... | 20:03 |
| wiking | sonney2k: i'll throttle it :P | 20:03 |
| @sonney2k | we are not weka but what we have with the notbooks etc it is cool | 20:03 |
| @sonney2k | if we appear in some newsletter at some point (like linux magazin last time) | 20:03 |
| besser82 | wiking: Or possibly a few more ;) | 20:03 |
| @sonney2k | or somebody writes a short ML intro | 20:03 |
| wiking | sonney2k: yeah true | 20:03 |
| @sonney2k | for example for heise / CT | 20:04 |
| wiking | but this is what we can do now | 20:04 |
| besser82 | wiking, sonney2k: You want publicity? | 20:04 |
| wiking | we dont have money | 20:04 |
| @sonney2k | our server will be dead | 20:04 |
| wiking | -> no cloud | 20:04 |
| besser82 | wiking, sonney2k: How about Heise and linux magazine ;) | 20:04 |
| van51 | sonney2k: https://gist.github.com/van51/6732567 | 20:04 |
| besser82 | wiking, sonney2k: Have some connections there ;) | 20:04 |
| wiking | if somebody gives me an access to a cloud where we pay after resource | 20:04 |
| @sonney2k | besser82, well we try to make 3.0 to be a hgiht quality sexy and cool | 20:04 |
| @sonney2k | so this would be the time to do sth about it | 20:04 |
| wiking | then we can rebill that for the users as well | 20:05 |
| wiking | but then again | 20:05 |
| @sonney2k | besser82, exactly heise / linux magazin would be the right people | 20:05 |
| wiking | it should be free for small demos | 20:05 |
| besser82 | wiking, sonney2k: And I know Thorsten Lemhuis and Michael Schwendt ;) | 20:05 |
| wiking | otherwise ppl will not use it | 20:05 |
| @sonney2k | besser82, somebody already wrote already about shogun in linux magazin for our (crappy) 2.1 release | 20:05 |
| wiking | 2.1 was coooooool | 20:05 |
| wiking | :D | 20:06 |
| @sonney2k | 3.0 is really eyecandy if we can get it right | 20:06 |
| wiking | so i'll do this shit and setup some shaping | 20:06 |
| @sonney2k | but it is a lot of work | 20:06 |
| besser82 | wiking, sonney2k: I can arrange sth. short before relase ;) | 20:06 |
| wiking | besser82: when? | 20:06 |
| @sonney2k | that is my only concern | 20:06 |
| wiking | besser82: or what? | 20:06 |
| wiking | :) | 20:06 |
| @sonney2k | no idea we can live up to the standards we want to have | 20:06 |
| wiking | sonney2k: well we are getting there now | 20:06 |
| besser82 | wiking, sonney2k: Publicity in iX and Linux Magazine | 20:06 |
| wiking | besser82: we need cloud :) | 20:07 |
| besser82 | wiking: that, too | 20:07 |
| wiking | ok but when? | 20:07 |
| @sonney2k | besser82, yeah that would be thousands of readers | 20:07 |
| wiking | i mean i know that i shouldn't be anxious like this | 20:07 |
| @sonney2k | besser82, and I am afraid of heise DDOS | 20:07 |
| wiking | but still i need to prepare shit for this notebook | 20:07 |
| wiking | server | 20:07 |
| besser82 | wiking: I'm currently dealing with f-i people to get some cloud-appliances | 20:07 |
| wiking | sonney2k: do we have $$? | 20:08 |
| @sonney2k | wiking, ok I will hack sth together for the website | 20:08 |
| wiking | sonney2k: you mean ref to the notebooks? | 20:08 |
| besser82 | wiking, sonney2k: Heise DDOS? | 20:08 |
| @sonney2k | wiking, a bit yes | 20:08 |
| wiking | sonney2k: can we buy an ec2? | 20:08 |
| @sonney2k | wiking, we get $500 per student | 20:08 |
| wiking | or anything that is similar | 20:09 |
| wiking | ? | 20:09 |
| besser82 | wiking, sonney2k: you don't need ec2 | 20:09 |
| @sonney2k | besser82, :) | 20:09 |
| wiking | besser82: ok anything is cool for me | 20:09 |
| wiking | sonney2k: i'm fine by sponsoring a little bit of my own money | 20:09 |
| besser82 | wiking, sonney2k: I'll give you c-as, just needs some days ;) | 20:09 |
| wiking | just to get this started asap | 20:09 |
| @sonney2k | I have some contacts into amazon I could ask them ... | 20:09 |
| wiking | i mean anyhow this would be on demand shit | 20:10 |
| @sonney2k | besser82, never heard of heise DDoS attacks tacking down everything? | 20:10 |
| wiking | so there's no real fee if it's not used | 20:10 |
| besser82 | sonney2k: not yet :) | 20:10 |
| wiking | besser82: is it possible to buy cloud service where u want to get some sponsored access for us? | 20:10 |
| @sonney2k | besser82, any project website mentioned in 'heise newsticker' was usually not reachable directly afterwards | 20:11 |
| wiking | besser82: as maybe the easiest way is that i signup/pay now a little bit to start up with the setup/tests and then later we might get a 'discount' or something | 20:11 |
| besser82 | wiking: fedora-infra is completely free ;) | 20:11 |
| besser82 | wiking: just needs a few days... | 20:12 |
| besser82 | wiking: ~ middle of next week ;) | 20:12 |
| besser82 | wiking: I can arrange ~3 c-a | 20:12 |
| besser82 | wiking: and is hosted on own servers ;) | 20:13 |
| wiking | besser82: yeah i get that | 20:13 |
| wiking | i'm just concernt about the timeframe | 20:13 |
| wiking | but no worries i have other bugs to fix | 20:14 |
| wiking | so i'll wait another 3 days | 20:14 |
| wiking | maybe i'll check till then how to this oauth based ipython notebook server shit | 20:14 |
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| @sonney2k | wiking, looks like it works http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/542/steps/notebooks/logs/stdio :) | 20:20 |
| lambday | votjakovr: could you please have a look at https://github.com/shogun-toolbox/shogun/issues/1684 | 20:22 |
| wiking | loool | 20:23 |
| wiking | We are pleased to announce that the IPython project has received a $1.15M grant from the Alfred P. Sloan foundation, that | 20:23 |
| votjakovr | lambday: hi! thanks for the report i'll have a look | 20:23 |
| shogun-buildbot | build #58 of clang34 - static analysis is complete: Failure [failed analyse] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/58 blamelist: Roman Votyakov <votjakovr@gmail.com> | 20:23 |
| lambday | votjakovr: thanks :) | 20:23 |
| wiking | this is crazy with ipython :) | 20:23 |
| wiking | sonney2k: LMNN timed out | 20:24 |
| wiking | sonney2k: 3 cells failed to complete 25 code cells from notebook | 20:24 |
| wiking | (lmnn) | 20:24 |
| votjakovr | lambday: am i right, that you just run ctest and get this output? | 20:25 |
| lambday | votjakovr: in debug | 20:25 |
| wiking | gp regression is failing as well | 20:25 |
| wiking | who wrote this: http://shogun-toolbox.org/static/notebook/gp_regression.html | 20:25 |
| wiking | and this one is just not generated at all http://www.shogun-toolbox.org/static/notebook/FGM.html | 20:25 |
| lambday | wiking: is there any time limit for the notebooks? | 20:26 |
| votjakovr | wiking: it seem like gp_regression notebook was removed | 20:26 |
| wiking | sonney2k: ^ | 20:27 |
| @sonney2k | votjakovr, yes heiko removed it | 20:27 |
| @sonney2k | votjakovr, he said he has some BIIIIIIG notebook coming up | 20:28 |
| votjakovr | sonney2k: yeah i know :) | 20:28 |
| votjakovr | sonney2k: i'm working on some cool examples for it | 20:28 |
| @sonney2k | lambday, yes there is a time limit | 20:28 |
| @sonney2k | but I we can change it | 20:28 |
| lambday | sonney2k: what is it? my notebook takes quite a lot of time | 20:29 |
| @sonney2k | looks like hushell yours and fernandos notebook require too much time | 20:29 |
| @sonney2k | lambday, how much? | 20:29 |
| lambday | sonney2k: have huge data... although reduced many things but still in my machine it takes around 20+ mins | 20:29 |
| @sonney2k | lambday, we run this stuff nightly and there is a 1200s timeout with no output | 20:29 |
| @sonney2k | lambday, your machine is core i7 right? | 20:30 |
| lambday | sonney2k: that's bad for my notebook :( | 20:30 |
| lambday | sonney2k: yep | 20:30 |
| @sonney2k | lambday, IMHO this is too big | 20:30 |
| @sonney2k | lambday, can you reduce it a little? | 20:30 |
| lambday | sonney2k: if I try to reduce it, we'll have many warning messages in the html itself... | 20:30 |
| @sonney2k | lambday, why? | 20:30 |
| lambday | sonney2k: yeah me and heiko discussed a few things - first I am trying to steal your pthreaded sparse-matrix * vector code :D and use that whenever we have HAVE_PTHREAD defined | 20:31 |
| lambday | as per our experience from the benchmark goes this would help quite a lot | 20:31 |
| lambday | sonney2k: if this too doesn't help much... then we'll try reducing the iterations in the iterative solvers that we use... (which in turn prints warning Did not converge!) | 20:32 |
| @sonney2k | lambday, but can't you reduce the data set or so? | 20:33 |
| lambday | sonney2k: but another problem is also there... we compute direct log-det using CStatistics::log_det method which is, as expected, the monster | 20:33 |
| @sonney2k | lambday, I mean use a subset of dims/examples | 20:33 |
| lambday | sonney2k: I can... in fact I can remove a whole dataset | 20:33 |
| @sonney2k | lambday, maybe it even runs out of memory on this poor machine | 20:33 |
| @sonney2k | it is not even corei7 yet | 20:33 |
| @sonney2k | some old core2 duo | 20:34 |
| lambday | sonney2k: how much memory do we have in 7nn? | 20:34 |
| shogun-buildbot | build #38 of clang34 - undefined behaviour analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/38 blamelist: Roman Votyakov <votjakovr@gmail.com> | 20:34 |
| lambday | oh | 20:34 |
| @sonney2k | quadcore at least | 20:34 |
| lambday | sonney2k: I will surely reduce that... in fact my notebook is huge!! | 20:34 |
| * sonney2k reruns notebook generation | 20:35 | |
| @sonney2k | lambday, how much memory does it need? | 20:35 |
| lambday | sonney2k: I can cut down a lot of things which I mainly used to show the power of our method on a really large dataset | 20:35 |
| lambday | sonney2k: errr... didn't notice! | 20:35 |
| @sonney2k | lambday, I would do it this way: write some constants at the beginning of the notebook indicating that you just take a subset and give a comment that this can be 1000 times bigger | 20:35 |
| lambday | sonney2k: for direct log_det computation, it creates a cholesky factor with almost 150 mil entriesz | 20:35 |
| lambday | ]nnz entries that it | 20:35 |
| @sonney2k | lambday, this machine here has only 4gb | 20:36 |
| lambday | sonney2k: :'( | 20:36 |
| @sonney2k | lambday, for the buildbot, webserver, git etc etc | 20:36 |
| lambday | sonney2k: I gotta remove the first large matrix completely!! | 20:36 |
| lambday | later parts are still affordable | 20:36 |
| @sonney2k | I guess that is why it fails | 20:37 |
| @sonney2k | but as I said keep the code but take subsets and indicate that this is just limited to be quicker for a demo | 20:37 |
| @sonney2k | whatever fernando's demo is doing it really eats CPU | 20:38 |
| @sonney2k | 3 cpus busy | 20:38 |
| lambday | sonney2k: I can comment out the CStatistics::log_det part (which is the main culprit) and say that for demo we have commented this out, and if you run this you'll get this value | 20:38 |
| lambday | sonney2k: will try to do these things over this weekend | 20:39 |
| @sonney2k | lambday, ok maybe show it heiko then :) | 20:40 |
| @sonney2k | van51, I just read your code | 20:40 |
| @sonney2k | van51, sorry that it took so long | 20:40 |
| lambday | sonney2k: yeah.. he suggested that I redeuce the time to 10 mins max | 20:40 |
| lambday | sonney2k: oh and do you think using const SGVector<float64_t>& vec=foo() instead of SGVector<float64_t> vec=foo() would help much?? | 20:41 |
| @sonney2k | van51, please use conv_feats->obtain_from_char(s_feats, 7-1, 7, 0, false); | 20:41 |
| shogun-buildbot | build #542 of nightly_default is complete: Failure [failed notebooks] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/542 | 20:41 |
| lambday | sonney2k: the second just increases the refcount, right? | 20:43 |
| lambday | so not much costly.. even when passing as params | 20:43 |
| lambday | using reference won't speed up a lot I guess | 20:43 |
| @sonney2k | van51, apart from that the code looks good. Does it work on a small data set? | 20:44 |
| @sonney2k | lambday, how often do you do the SGVector operation? | 20:45 |
| @sonney2k | lambday, what it does is increase the refcount | 20:45 |
| @sonney2k | this is done in a thread safe manner | 20:46 |
| lambday | sonney2k: very very often | 20:46 |
| @sonney2k | the rest is just copy of pointer and length | 20:46 |
| @sonney2k | lambday, very very as in ? | 20:46 |
| @sonney2k | 1e6 ? | 20:46 |
| @sonney2k | 1e9 ? | 20:46 |
| lambday | sonney2k: let me see.. 1000 iterations default, ~30 times... say 30k for one estimate | 20:47 |
| lambday | sonney2k: at some ocassions, we do it 50000 iterations, ~30 times... | 20:47 |
| lambday | anyway its just three added operations, won't cost much | 20:48 |
| lambday | passing around SGVector is done in a lot of places I guess | 20:48 |
| @sonney2k | give me a single number please | 20:48 |
| lambday | I didn't use reference, just simple SGVector | 20:48 |
| shogun-buildbot | build #41 of clang34 - thread analysis is complete: Failure [failed test] Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/41 blamelist: Roman Votyakov <votjakovr@gmail.com> | 20:48 |
| lambday | sonney2k: 30k to 5mil | 20:48 |
| @sonney2k | 5e6 only? | 20:49 |
| lambday | yeah | 20:49 |
| @sonney2k | then this is nothing | 20:49 |
| @sonney2k | maybe 100ms | 20:49 |
| @sonney2k | that is not the bottleneck | 20:49 |
| @sonney2k | you must be doing sth more expensive elsewhere | 20:50 |
| lambday | sonney2k: alright.. yeah bottleneck is SGSparseMatrix*SGVector, which *has to be done* in pthreaded way whenever we can | 20:50 |
| lambday | sonney2k: I will add that code soon | 20:51 |
| @sonney2k | lambday, so this is the part that is done 5e6 times too right? | 20:51 |
| lambday | sonney2k: yep | 20:51 |
| @sonney2k | wiking, I think LMNN is not converging in this example | 20:51 |
| @sonney2k | wiking, it is verry slow | 20:51 |
| @sonney2k | did eat > 1 hour cpu time before being killed | 20:52 |
| lambday | sonney2k: could you please let me know how much mine takes on that machine?? | 20:53 |
| @sonney2k | lambday, I will create some script that measures the time | 20:54 |
| lambday | sonney2k: that would help a lot on which portions should I comment out.. thanks :) | 20:55 |
| van51 | sonney2k: hey, sorry I was eating | 20:58 |
| van51 | sonney2k: I used it on 500 examples and it seg'faulted: https://gist.github.com/van51/6733523 | 20:59 |
| @sonney2k | van51, :( | 20:59 |
| @sonney2k | we have no tests for anything for that old code | 21:00 |
| @sonney2k | van51, it could be a big in SVMlight introduced due to some refactoring | 21:00 |
| @sonney2k | or the kernel | 21:00 |
| van51 | sonney2k: I can look into the kernel | 21:00 |
| @sonney2k | van51, please compile again in Debug mode and then get a valgrind trace | 21:01 |
| @sonney2k | this is currently not very helpful | 21:01 |
| van51 | sonney2k: ok, when I update it I will ping you | 21:01 |
| @sonney2k | van51, regarding testing the kernel: | 21:02 |
| @sonney2k | van51, you could just compute the kernel matrix | 21:03 |
| @sonney2k | van51, and compare it to what you get with the hashed thing | 21:03 |
| @sonney2k | van51, it is the same as if you used 7-grams | 21:03 |
| @sonney2k | van51, in your hashedngramdocfeatures | 21:03 |
| van51 | sonney2k: I think we had compared it kernel-wise | 21:04 |
| @sonney2k | van51, if you can please do this in a test | 21:04 |
| van51 | sonney2k: sure | 21:04 |
| @sonney2k | van51, hmmhh well the the add_to_normal call in the kernel is exactly what add_to_dense vec is doing | 21:05 |
| @sonney2k | normal vector == the dense vector | 21:05 |
| @sonney2k | so you could test that too if it is that | 21:06 |
| @sonney2k | if it is svmlight I guess I have to figure out what it is :`-( | 21:06 |
| van51 | sonney2k: haha, don't get sad before we get to that | 21:07 |
| votjakovr | lambday: could you please help me to reproduce the error? i've configured latest develop branch with cmake -DENABLE_TESTING=ON -DPythonModular=ON -DCMAKE_BUILD_TYPE=Debug and then run make and then ctest and it doesn't report this error | 21:17 |
| lambday | votjakovr: weird.. I did the same and it gave this error... wait I am trying again | 21:17 |
| @sonney2k | FGMs also time out | 21:17 |
| @sonney2k | alright so final evaluation emails are out | 21:18 |
| @sonney2k | congrats to everyone who passed | 21:18 |
| @sonney2k | (actually all of you :P ) | 21:18 |
| lambday | sonney2k: yayyyy :D | 21:19 |
| lambday | sonney2k: can I ask shogun buildbot to dance? :D | 21:20 |
| @sonney2k | lambday, sure do it :) | 21:20 |
| lambday | shogun-buildbot: dance | 21:21 |
| shogun-buildbot | <(^.^<) | 21:21 |
| shogun-buildbot | <(^.^)> | 21:21 |
| shogun-buildbot | (>^.^)> | 21:21 |
| shogun-buildbot | (7^.^)7 | 21:21 |
| shogun-buildbot | (>^.^<) | 21:21 |
| lambday | hahaha :D | 21:21 |
| @sonney2k | heh | 21:21 |
| @sonney2k | van51, keep me updated - I will be off now but read the logs | 21:22 |
| * sonney2k off | 21:22 | |
| van51 | sonney2k: ok, I just updated the valgrind output btw | 21:22 |
| van51 | sonney2k: https://gist.github.com/van51/6733523 | 21:22 |
| @sonney2k | van51, at least you see the real location now | 21:23 |
| van51 | sonney2k: yeah, I will look into it :) | 21:23 |
| @sonney2k | thanks | 21:23 |
| @sonney2k | ok now for real | 21:23 |
| * sonney2k Zzzzz.. | 21:23 | |
| lambday | votjakovr: I just did this again and it still gives the error... might be something wrong | 21:28 |
| votjakovr | lambday: hmm... ok, i'll try to find the bug | 21:33 |
| lambday | votjakovr: I did rebase this morning.. forgot to rebase this time... may be something you fixed in your PR this morning.. I am trying.. will let you know | 21:34 |
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| votjakovr | lambday: ok, thanks | 21:34 |
| lambday | votjakovr: sorry roman still same error... :( | 21:39 |
| lambday | if someone else can't reproduce this then something must be wrong with any of my local pkgs.. | 21:40 |
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| votjakovr | lambday: heh, no problem, i'll try to review the code to find a possible bug... Btw travis also didn't catch it | 21:43 |
| lambday | votjakovr: possible that some of my local pkgs is doing something funny... ExactInferenceMethod only uses eigen3 right? | 21:44 |
| votjakovr | lambday: yeah | 21:45 |
| lambday | weird! | 21:46 |
| votjakovr | indeed | 21:46 |
| lambday | votjakovr: let's ask someone else try this and if he too doesn't get any such things we can close this issue | 21:46 |
| votjakovr | lambday: ok :) | 21:49 |
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| wiking | shogun-buildbot: force build --branch=develop 'nightly_default' | 21:53 |
| shogun-buildbot | build #543 forced | 21:53 |
| shogun-buildbot | I'll give a shout when the build finishes | 21:53 |
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| shogun-buildbot | Hey! build nightly_default #543 is complete: Exception [exception tutorial updatedoc notebooks upload] | 22:18 |
| shogun-buildbot | Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/543 | 22:18 |
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| van51 | sonney2k: I believe the bug is in add_to_normal | 22:21 |
| van51 | sonney2k: I called it externally (out of SVMLight) and it still caused a crush | 22:22 |
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| wiking | shogun-buildbot: force build --branch=develop 'nightly_default' | 22:43 |
| shogun-buildbot | build #544 forced | 22:43 |
| shogun-buildbot | I'll give a shout when the build finishes | 22:43 |
| shogun-buildbot | build #544 of nightly_default is complete: Failure [failed notebooks] Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/544 | 22:53 |
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| wiking | shogun-buildbot: force build --branch=develop 'nightly_default' | 22:56 |
| shogun-buildbot | build #545 forced | 22:56 |
| shogun-buildbot | I'll give a shout when the build finishes | 22:56 |
| shogun-buildbot | Hey! build nightly_default #545 is complete: Exception [exception updatedoc upload] | 23:01 |
| shogun-buildbot | Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_default/builds/545 | 23:01 |
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| --- Log closed Sat Sep 28 00:00:18 2013 | ||
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