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KNN.h
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1 /*
2  * This program is free software; you can redistribute it and/or modify
3  * it under the terms of the GNU General Public License as published by
4  * the Free Software Foundation; either version 3 of the License, or
5  * (at your option) any later version.
6  *
7  * Written (W) 2006 Christian Gehl
8  * Written (W) 1999-2009 Soeren Sonnenburg
9  * Written (W) 2011 Sergey Lisitsyn
10  * Written (W) 2012 Fernando José Iglesias García, cover tree support
11  * Copyright (C) 2011 Berlin Institute of Technology and Max-Planck-Society
12  */
13 
14 #ifndef _KNN_H__
15 #define _KNN_H__
16 
17 #include <shogun/lib/config.h>
18 
19 #include <shogun/lib/common.h>
20 #include <shogun/io/SGIO.h>
24 
25 namespace shogun
26 {
27 
28 class CDistanceMachine;
29 
56 class CKNN : public CDistanceMachine
57 {
58  public:
60 
61 
62  CKNN();
63 
70  CKNN(int32_t k, CDistance* d, CLabels* trainlab);
71  virtual ~CKNN();
72 
77  virtual EMachineType get_classifier_type() { return CT_KNN; }
78 
89 
95  virtual CMulticlassLabels* apply_multiclass(CFeatures* data=NULL);
96 
98  virtual float64_t apply_one(int32_t vec_idx)
99  {
100  SG_ERROR("for performance reasons use apply() instead of apply(int32_t vec_idx)\n")
101  return 0;
102  }
103 
108 
114  virtual bool load(FILE* srcfile);
115 
121  virtual bool save(FILE* dstfile);
122 
127  inline void set_k(int32_t k)
128  {
129  ASSERT(k>0)
130  m_k=k;
131  }
132 
137  inline int32_t get_k()
138  {
139  return m_k;
140  }
141 
145  inline void set_q(float64_t q)
146  {
147  ASSERT(q<=1.0 && q>0.0)
148  m_q = q;
149  }
150 
154  inline float64_t get_q() { return m_q; }
155 
159  inline void set_use_covertree(bool use_covertree)
160  {
161  m_use_covertree = use_covertree;
162  }
163 
167  inline bool get_use_covertree() const { return m_use_covertree; }
168 
170  virtual const char* get_name() const { return "KNN"; }
171 
172  protected:
177  virtual void store_model_features();
178 
182  virtual CMulticlassLabels* classify_NN();
183 
187  void init_distance(CFeatures* data);
188 
197  virtual bool train_machine(CFeatures* data=NULL);
198 
199  private:
200  void init();
201 
214  int32_t choose_class(float64_t* classes, int32_t* train_lab);
215 
228  void choose_class_for_multiple_k(int32_t* output, int32_t* classes, int32_t* train_lab, int32_t step);
229 
230  protected:
232  int32_t m_k;
233 
236 
239 
241  int32_t m_num_classes;
242 
244  int32_t m_min_label;
245 
248 };
249 
250 }
251 #endif
EMachineType
Definition: Machine.h:33
virtual void store_model_features()
Definition: KNN.cpp:450
virtual bool save(FILE *dstfile)
Definition: KNN.cpp:443
virtual EMachineType get_classifier_type()
Definition: KNN.h:77
Class Distance, a base class for all the distances used in the Shogun toolbox.
Definition: Distance.h:81
void init_distance(CFeatures *data)
Definition: KNN.cpp:422
The class Labels models labels, i.e. class assignments of objects.
Definition: Labels.h:43
float64_t get_q()
Definition: KNN.h:154
SGMatrix< int32_t > classify_for_multiple_k()
Definition: KNN.cpp:333
#define SG_ERROR(...)
Definition: SGIO.h:129
int32_t get_k()
Definition: KNN.h:137
int32_t m_min_label
smallest label, i.e. -1
Definition: KNN.h:244
virtual bool train_machine(CFeatures *data=NULL)
Definition: KNN.cpp:72
void set_q(float64_t q)
Definition: KNN.h:145
SGMatrix< index_t > nearest_neighbors()
Definition: KNN.cpp:109
A generic DistanceMachine interface.
virtual bool load(FILE *srcfile)
Definition: KNN.cpp:436
int32_t m_num_classes
number of classes (i.e. number of values labels can take)
Definition: KNN.h:241
Multiclass Labels for multi-class classification.
int32_t m_k
the k parameter in KNN
Definition: KNN.h:232
#define ASSERT(x)
Definition: SGIO.h:201
void set_use_covertree(bool use_covertree)
Definition: KNN.h:159
#define MACHINE_PROBLEM_TYPE(PT)
Definition: Machine.h:120
double float64_t
Definition: common.h:50
Class KNN, an implementation of the standard k-nearest neigbor classifier.
Definition: KNN.h:56
float64_t m_q
parameter q of rank weighting
Definition: KNN.h:235
SGVector< int32_t > m_train_labels
Definition: KNN.h:247
bool get_use_covertree() const
Definition: KNN.h:167
void set_k(int32_t k)
Definition: KNN.h:127
all of classes and functions are contained in the shogun namespace
Definition: class_list.h:18
virtual const char * get_name() const
Definition: KNN.h:170
virtual ~CKNN()
Definition: KNN.cpp:68
The class Features is the base class of all feature objects.
Definition: Features.h:68
virtual CMulticlassLabels * classify_NN()
Definition: KNN.cpp:288
virtual CMulticlassLabels * apply_multiclass(CFeatures *data=NULL)
Definition: KNN.cpp:153
virtual float64_t apply_one(int32_t vec_idx)
get output for example "vec_idx"
Definition: KNN.h:98
bool m_use_covertree
parameter to enable cover tree support
Definition: KNN.h:238

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