Detailed Description

UI kernel.

Definition at line 24 of file GUIKernel.h.

Inheritance diagram for CGUIKernel:

Public Member Functions
	CGUIKernel ()

	CGUIKernel (CSGInterface *interface)

	~CGUIKernel ()

CKernel *	get_kernel ()

bool	set_normalization (char *normalization, float64_t c=0.0, float64_t r=0.0)

bool	set_kernel (CKernel *kern)

bool	add_kernel (CKernel *kern, float64_t weight=1)

bool	del_last_kernel ()

bool	init_kernel (const char *target)

bool	init_kernel_optimization ()

bool	delete_kernel_optimization ()

bool	save_kernel (char *filename)

bool	clean_kernel ()

bool	resize_kernel_cache (int32_t size)

bool	set_optimization_type (char *opt_type)

bool	precompute_subkernels ()

bool	is_initialized ()

CKernel *	create_oligo (int32_t size, int32_t k, float64_t width)

CKernel *	create_diag (int32_t size=10, float64_t diag=1)

CKernel *	create_const (int32_t size=10, float64_t c=1)

CKernel *	create_custom (float64_t *kmatrix, int32_t num_feat, int32_t num_vec, bool source_is_diag, bool dest_is_diag)

CKernel *	create_gaussianshift (int32_t size=10, float64_t width=1, int32_t max_shift=0, int32_t shift_step=1)

CKernel *	create_sparsegaussian (int32_t size=10, float64_t width=1)

CKernel *	create_gaussian (int32_t size=10, float64_t width=1)

CKernel *	create_sigmoid (int32_t size=10, float64_t gamma=0.01, float64_t coef0=0)

CKernel *	create_tppk (int32_t size, float64_t *km, int32_t rows, int32_t cols)

CKernel *	create_sparsepoly (int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true)

CKernel *	create_poly (int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true)

CKernel *	create_wavelet (int32_t size=10, float64_t Wdilation=5.0, float64_t Wtranslation=2.0)

CKernel *	create_localityimprovedstring (int32_t size=10, int32_t length=3, int32_t inner_degree=3, int32_t outer_degree=1, EKernelType ktype=K_LOCALITYIMPROVED)

CKernel *	create_weighteddegreestring (int32_t size=10, int32_t order=3, int32_t max_mismatch=1, bool use_normalization=true, int32_t mkl_stepsize=1, bool block_computation=true, int32_t single_degree=-1)

CKernel *	create_weighteddegreepositionstring (int32_t size=10, int32_t order=3, int32_t max_mismatch=1, int32_t length=0, int32_t center=0, float64_t step=1)

CKernel *	create_weighteddegreepositionstring3 (int32_t size=10, int32_t order=3, int32_t max_mismatch=1, int32_t shifts=NULL, int32_t length=0, int32_t mkl_stepsize=1, float64_t position_weights=NULL)

CKernel *	create_weighteddegreepositionstring2 (int32_t size=10, int32_t order=3, int32_t max_mismatch=1, int32_t *shifts=NULL, int32_t length=0, bool use_normalization=true)

CKernel *	create_weighteddegreerbf (int32_t size=10, int32_t degree=1, int32_t nof_properties=1, float64_t width=1)

CKernel *	create_spectrummismatchrbf (int32_t size=10, float64_t *AA_matrix=NULL, int32_t nr=128, int32_t nc=128, int32_t max_mismatch=1, int32_t degree=1, float64_t width=1)

CKernel *	create_localalignmentstring (int32_t size=10)

CKernel *	create_fixeddegreestring (int32_t size=10, int32_t d=3)

CKernel *	create_chi2 (int32_t size=10, float64_t width=1)

CKernel *	create_commstring (int32_t size=10, bool use_sign=false, char *norm_str=NULL, EKernelType ktype=K_WEIGHTEDCOMMWORDSTRING)

CKernel *	create_matchwordstring (int32_t size=10, int32_t d=3, bool normalize=true)

CKernel *	create_polymatchstring (int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true)

CKernel *	create_polymatchwordstring (int32_t size=10, int32_t degree=2, bool inhomogene=false, bool normalize=true)

CKernel *	create_salzbergword (int32_t size=10)

CKernel *	create_histogramword (int32_t size=10)

CKernel *	create_linearbyte (int32_t size=10, float64_t scale=-1)

CKernel *	create_linearword (int32_t size=10, float64_t scale=-1)

CKernel *	create_linearstring (int32_t size=10, float64_t scale=-1)

CKernel *	create_linear (int32_t size=10, float64_t scale=-1)

CKernel *	create_sparselinear (int32_t size=10, float64_t scale=-1)

CKernel *	create_distance (int32_t size=10, float64_t width=1)

CKernel *	create_combined (int32_t size=10, bool append_subkernel_weights=false)

virtual const char *	get_name () const

virtual CSGObject *	shallow_copy () const

virtual CSGObject *	deep_copy () const

virtual bool	is_generic (EPrimitiveType *generic) const

template<class T >
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

template<>
void	set_generic ()

void	unset_generic ()

virtual void	print_serializable (const char *prefix="")

virtual bool	save_serializable (CSerializableFile file, const char prefix="")

virtual bool	load_serializable (CSerializableFile file, const char prefix="")

void	set_global_io (SGIO *io)

SGIO *	get_global_io ()

void	set_global_parallel (Parallel *parallel)

Parallel *	get_global_parallel ()

void	set_global_version (Version *version)

Version *	get_global_version ()

SGStringList< char >	get_modelsel_names ()

void	print_modsel_params ()

char *	get_modsel_param_descr (const char *param_name)

index_t	get_modsel_param_index (const char *param_name)

void	build_gradient_parameter_dictionary (CMap< TParameter , CSGObject > *dict)

virtual void	update_parameter_hash ()

virtual bool	parameter_hash_changed ()

virtual bool	equals (CSGObject *other, float64_t accuracy=0.0, bool tolerant=false)

virtual CSGObject *	clone ()

Public Attributes
SGIO *	io

Parallel *	parallel

Version *	version

Parameter *	m_parameters

Parameter *	m_model_selection_parameters

Parameter *	m_gradient_parameters

uint32_t	m_hash

Protected Member Functions
virtual void	load_serializable_pre () throw (ShogunException)

virtual void	load_serializable_post () throw (ShogunException)

virtual void	save_serializable_pre () throw (ShogunException)

virtual void	save_serializable_post () throw (ShogunException)

Protected Attributes
CKernel *	kernel

CSGInterface *	ui

bool	initialized

Constructor & Destructor Documentation

CGUIKernel ( )

constructor

Definition at line 28 of file GUIKernel.h.

CGUIKernel ( CSGInterface * interface )

constructor

Parameters

interface

Definition at line 65 of file GUIKernel.cpp.

~CGUIKernel ( )

destructor

Definition at line 71 of file GUIKernel.cpp.

Member Function Documentation

bool add_kernel	(	CKernel *	kern,
		float64_t	weight = `1`
	)

add kernel to a Combined kernel, creating one if necessary

Definition at line 861 of file GUIKernel.cpp.

void build_gradient_parameter_dictionary ( CMap< TParameter *, CSGObject * > * dict )

inherited

Builds a dictionary of all parameters in SGObject as well of those of SGObjects that are parameters of this object. Dictionary maps parameters to the objects that own them.

Parameters

dict	dictionary of parameters to be built.

Definition at line 597 of file SGObject.cpp.

bool clean_kernel ( )

clean/r kernel

Definition at line 914 of file GUIKernel.cpp.

CSGObject * clone ( )

virtualinherited

Creates a clone of the current object. This is done via recursively traversing all parameters, which corresponds to a deep copy. Calling equals on the cloned object always returns true although none of the memory of both objects overlaps.

Returns: an identical copy of the given object, which is disjoint in memory. NULL if the clone fails. Note that the returned object is SG_REF'ed

Definition at line 714 of file SGObject.cpp.

CKernel * create_chi2	(	int32_t	size = `10`,
		float64_t	width = `1`
	)

create a new Chi2 kernel

Definition at line 426 of file GUIKernel.cpp.

CKernel * create_combined	(	int32_t	size = `10`,
		bool	append_subkernel_weights = `false`
	)

create a new Combined kernel

Definition at line 627 of file GUIKernel.cpp.

CKernel * create_commstring	(	int32_t	size = `10`,
		bool	use_sign = `false`,
		char *	norm_str = `NULL`,
		EKernelType	ktype = `K_WEIGHTEDCOMMWORDSTRING`
	)

create a new WeightedCommWord/CommWord/CommULongString kernel

Definition at line 437 of file GUIKernel.cpp.

CKernel * create_const	(	int32_t	size = `10`,
		float64_t	c = `1`
	)

create a new Const kernel

Definition at line 100 of file GUIKernel.cpp.

CKernel * create_custom	(	float64_t *	kmatrix,
		int32_t	num_feat,
		int32_t	num_vec,
		bool	source_is_diag,
		bool	dest_is_diag
	)

create a new Custom kernel

Definition at line 113 of file GUIKernel.cpp.

CKernel * create_diag	(	int32_t	size = `10`,
		float64_t	diag = `1`
	)

create a new Diag kernel

Definition at line 89 of file GUIKernel.cpp.

CKernel * create_distance	(	int32_t	size = `10`,
		float64_t	width = `1`
	)

create a new Distance kernel

Definition at line 612 of file GUIKernel.cpp.

CKernel * create_fixeddegreestring	(	int32_t	size = `10`,
		int32_t	d = `3`
	)

create a new FixedDegreeString kernel

Definition at line 415 of file GUIKernel.cpp.

CKernel * create_gaussian	(	int32_t	size = `10`,
		float64_t	width = `1`
	)

create a new Gaussian kernel

Definition at line 157 of file GUIKernel.cpp.

CKernel * create_gaussianshift	(	int32_t	size = `10`,
		float64_t	width = `1`,
		int32_t	max_shift = `0`,
		int32_t	shift_step = `1`
	)

create a new GaussianShift kernel

Definition at line 134 of file GUIKernel.cpp.

CKernel * create_histogramword ( int32_t size = 10 )

create a new HistogramWord kernel

Definition at line 530 of file GUIKernel.cpp.

CKernel * create_linear	(	int32_t	size = `10`,
		float64_t	scale = `-1`
	)

create a new Linear kernel

Definition at line 578 of file GUIKernel.cpp.

CKernel * create_linearbyte	(	int32_t	size = `10`,
		float64_t	scale = `-1`
	)

create a new LinearByte kernel

Definition at line 546 of file GUIKernel.cpp.

CKernel * create_linearstring	(	int32_t	size = `10`,
		float64_t	scale = `-1`
	)

create a new LinearString kernel

Definition at line 566 of file GUIKernel.cpp.

CKernel * create_linearword	(	int32_t	size = `10`,
		float64_t	scale = `-1`
	)

create a new LinearWord kernel

Definition at line 556 of file GUIKernel.cpp.

CKernel * create_localalignmentstring ( int32_t size = 10 )

create a new LocalAlignmentString kernel

Definition at line 404 of file GUIKernel.cpp.

CKernel * create_localityimprovedstring	(	int32_t	size = `10`,
		int32_t	length = `3`,
		int32_t	inner_degree = `3`,
		int32_t	outer_degree = `1`,
		EKernelType	ktype = `K_LOCALITYIMPROVED`
	)

create a new (Simple)LocalityImprovedString kernel

Definition at line 212 of file GUIKernel.cpp.

CKernel * create_matchwordstring	(	int32_t	size = `10`,
		int32_t	d = `3`,
		bool	normalize = `true`
	)

create a new MatchWordString kernel

Definition at line 469 of file GUIKernel.cpp.

CKernel * create_oligo	(	int32_t	size,
		int32_t	k,
		float64_t	width
	)

create Oligo kernel

Definition at line 81 of file GUIKernel.cpp.

CKernel * create_poly	(	int32_t	size = `10`,
		int32_t	degree = `2`,
		bool	inhomogene = `false`,
		bool	normalize = `true`
	)

create a new Poly kernel

Definition at line 201 of file GUIKernel.cpp.

CKernel * create_polymatchstring	(	int32_t	size = `10`,
		int32_t	degree = `2`,
		bool	inhomogene = `false`,
		bool	normalize = `true`
	)

create a new PolyMatchString kernel

Definition at line 480 of file GUIKernel.cpp.

CKernel * create_polymatchwordstring	(	int32_t	size = `10`,
		int32_t	degree = `2`,
		bool	inhomogene = `false`,
		bool	normalize = `true`
	)

create a new PolyMatchWordString kernel

Definition at line 491 of file GUIKernel.cpp.

CKernel * create_salzbergword ( int32_t size = 10 )

create a new SalzbergWord kernel

Definition at line 502 of file GUIKernel.cpp.

CKernel * create_sigmoid	(	int32_t	size = `10`,
		float64_t	gamma = `0.01`,
		float64_t	coef0 = `0`
	)

create a new Sigmoid kernel

Definition at line 168 of file GUIKernel.cpp.

CKernel * create_sparsegaussian	(	int32_t	size = `10`,
		float64_t	width = `1`
	)

create a new SparseGaussian kernel

Definition at line 146 of file GUIKernel.cpp.

CKernel * create_sparselinear	(	int32_t	size = `10`,
		float64_t	scale = `-1`
	)

create a new SparseLinear kernel

Definition at line 589 of file GUIKernel.cpp.

CKernel * create_sparsepoly	(	int32_t	size = `10`,
		int32_t	degree = `2`,
		bool	inhomogene = `false`,
		bool	normalize = `true`
	)

create a new SparsePoly kernel

Definition at line 190 of file GUIKernel.cpp.

CKernel * create_spectrummismatchrbf	(	int32_t	size = `10`,
		float64_t *	AA_matrix = `NULL`,
		int32_t	nr = `128`,
		int32_t	nc = `128`,
		int32_t	max_mismatch = `1`,
		int32_t	degree = `1`,
		float64_t	width = `1`
	)

create a new SpectrumMismatchRBF kernel

Definition at line 390 of file GUIKernel.cpp.

CKernel * create_tppk	(	int32_t	size,
		float64_t *	km,
		int32_t	rows,
		int32_t	cols
	)

create a new TPP kernel

Definition at line 600 of file GUIKernel.cpp.

CKernel * create_wavelet	(	int32_t	size = `10`,
		float64_t	Wdilation = `5.0`,
		float64_t	Wtranslation = `2.0`
	)

create new Wavelet kernel

Definition at line 179 of file GUIKernel.cpp.

CKernel * create_weighteddegreepositionstring	(	int32_t	size = `10`,
		int32_t	order = `3`,
		int32_t	max_mismatch = `1`,
		int32_t	length = `0`,
		int32_t	center = `0`,
		float64_t	step = `1`
	)

create a new WeightedDegreePositionString kernel

Definition at line 276 of file GUIKernel.cpp.

CKernel * create_weighteddegreepositionstring2	(	int32_t	size = `10`,
		int32_t	order = `3`,
		int32_t	max_mismatch = `1`,
		int32_t *	shifts = `NULL`,
		int32_t	length = `0`,
		bool	use_normalization = `true`
	)

create a new WeightedDegreePositionString2

Definition at line 332 of file GUIKernel.cpp.

CKernel * create_weighteddegreepositionstring3	(	int32_t	size = `10`,
		int32_t	order = `3`,
		int32_t	max_mismatch = `1`,
		int32_t *	shifts = `NULL`,
		int32_t	length = `0`,
		int32_t	mkl_stepsize = `1`,
		float64_t *	position_weights = `NULL`
	)

create a new WeightedDegreePositionString3

Definition at line 309 of file GUIKernel.cpp.

CKernel * create_weighteddegreerbf	(	int32_t	size = `10`,
		int32_t	degree = `1`,
		int32_t	nof_properties = `1`,
		float64_t	width = `1`
	)

create a new WeightedDegreeRBF kernel

Definition at line 379 of file GUIKernel.cpp.

CKernel * create_weighteddegreestring	(	int32_t	size = `10`,
		int32_t	order = `3`,
		int32_t	max_mismatch = `1`,
		bool	use_normalization = `true`,
		int32_t	mkl_stepsize = `1`,
		bool	block_computation = `true`,
		int32_t	single_degree = `-1`
	)

create a new WeightedDegreeString kernel

Definition at line 237 of file GUIKernel.cpp.

CSGObject * deep_copy ( ) const

virtualinherited

A deep copy. All the instance variables will also be copied.

Definition at line 198 of file SGObject.cpp.

bool del_last_kernel ( )

delete last kernel in combined kernel

Definition at line 897 of file GUIKernel.cpp.

bool delete_kernel_optimization ( )

delete kernel optimization

Definition at line 748 of file GUIKernel.cpp.

bool equals	(	CSGObject *	other,
		float64_t	accuracy = `0.0`,
		bool	tolerant = `false`
	)

virtualinherited

Recursively compares the current SGObject to another one. Compares all registered numerical parameters, recursion upon complex (SGObject) parameters. Does not compare pointers!

May be overwritten but please do with care! Should not be necessary in most cases.

Parameters

other	object to compare with
accuracy	accuracy to use for comparison (optional)
tolerant	allows linient check on float equality (within accuracy)

Returns: true if all parameters were equal, false if not

Definition at line 618 of file SGObject.cpp.

SGIO * get_global_io ( )

inherited

get the io object

Returns: io object

Definition at line 235 of file SGObject.cpp.

Parallel * get_global_parallel ( )

inherited

get the parallel object

Returns: parallel object

Definition at line 277 of file SGObject.cpp.

Version * get_global_version ( )

inherited

get the version object

Returns: version object

Definition at line 290 of file SGObject.cpp.

CKernel * get_kernel ( )

get active kernel

Definition at line 76 of file GUIKernel.cpp.

SGStringList< char > get_modelsel_names ( )

inherited

Returns: vector of names of all parameters which are registered for model selection

Definition at line 498 of file SGObject.cpp.

char * get_modsel_param_descr ( const char * param_name )

inherited

Returns description of a given parameter string, if it exists. SG_ERROR otherwise

Parameters

param_name name of the parameter

Returns: description of the parameter

Definition at line 522 of file SGObject.cpp.

index_t get_modsel_param_index ( const char * param_name )

inherited

Returns index of model selection parameter with provided index

Parameters

param_name name of model selection parameter

Returns: index of model selection parameter with provided name, -1 if there is no such

Definition at line 535 of file SGObject.cpp.

virtual const char* get_name ( ) const

virtual

Returns: object name

Implements CSGObject.

Definition at line 172 of file GUIKernel.h.

bool init_kernel ( const char * target )

initialize kernel

Definition at line 757 of file GUIKernel.cpp.

bool init_kernel_optimization ( )

initialize kernel optimization

Definition at line 715 of file GUIKernel.cpp.

bool is_generic ( EPrimitiveType * generic ) const

virtualinherited

If the SGSerializable is a class template then TRUE will be returned and GENERIC is set to the type of the generic.

Parameters

generic set to the type of the generic if returning TRUE

Returns: TRUE if a class template.

Definition at line 296 of file SGObject.cpp.

bool is_initialized ( )

check if kernel is initialized

Definition at line 68 of file GUIKernel.h.

bool load_serializable	(	CSerializableFile *	file,
		const char *	prefix = `""`
	)

virtualinherited

Load this object from file. If it will fail (returning FALSE) then this object will contain inconsistent data and should not be used!

Parameters

file	where to load from
prefix	prefix for members

Returns: TRUE if done, otherwise FALSE

Definition at line 369 of file SGObject.cpp.

void load_serializable_post	(		)
throw	(	ShogunException
	)

protectedvirtualinherited

Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_POST is called.

Exceptions

ShogunException will be thrown if an error occurs.

Reimplemented in CKernel, CWeightedDegreePositionStringKernel, CList, CAlphabet, CLinearHMM, CGaussianKernel, CInverseMultiQuadricKernel, CCircularKernel, and CExponentialKernel.

Definition at line 426 of file SGObject.cpp.

void load_serializable_pre	(		)
throw	(	ShogunException
	)

protectedvirtualinherited

Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_PRE is called.

Exceptions

ShogunException will be thrown if an error occurs.

Reimplemented in CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, and CDynamicObjectArray.

Definition at line 421 of file SGObject.cpp.

bool parameter_hash_changed ( )

virtualinherited

Returns: whether parameter combination has changed since last update

Definition at line 262 of file SGObject.cpp.

bool precompute_subkernels ( )

precompute subkernels

Definition at line 960 of file GUIKernel.cpp.

void print_modsel_params ( )

inherited

prints all parameter registered for model selection and their type

Definition at line 474 of file SGObject.cpp.

void print_serializable ( const char * prefix = "" )

virtualinherited

prints registered parameters out

Parameters

prefix prefix for members

Definition at line 308 of file SGObject.cpp.

bool resize_kernel_cache ( int32_t size )

resize kernel cache

Definition at line 922 of file GUIKernel.cpp.

bool save_kernel ( char * filename )

save kernel (matrix) to file

Definition at line 837 of file GUIKernel.cpp.

bool save_serializable	(	CSerializableFile *	file,
		const char *	prefix = `""`
	)

virtualinherited

Save this object to file.

Parameters

file	where to save the object; will be closed during returning if PREFIX is an empty string.
prefix	prefix for members

Returns: TRUE if done, otherwise FALSE

Definition at line 314 of file SGObject.cpp.

void save_serializable_post	(		)
throw	(	ShogunException
	)

protectedvirtualinherited

Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_POST is called.

Exceptions

ShogunException will be thrown if an error occurs.

Reimplemented in CKernel.

Definition at line 436 of file SGObject.cpp.

void save_serializable_pre	(		)
throw	(	ShogunException
	)

protectedvirtualinherited

Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_PRE is called.

Exceptions

ShogunException will be thrown if an error occurs.

Reimplemented in CKernel, CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, and CDynamicObjectArray.

Definition at line 431 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 41 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 46 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 51 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 56 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 61 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 66 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 71 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 76 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 81 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 86 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 91 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 96 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 101 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 106 of file SGObject.cpp.

void set_generic ( )

inherited

Definition at line 111 of file SGObject.cpp.

void set_generic ( )

inherited

set generic type to T

void set_global_io ( SGIO * io )

inherited

set the io object

Parameters

io	io object to use

Definition at line 228 of file SGObject.cpp.

void set_global_parallel ( Parallel * parallel )

inherited

set the parallel object

Parameters

parallel parallel object to use

Definition at line 241 of file SGObject.cpp.

void set_global_version ( Version * version )

inherited

set the version object

Parameters

version version object to use

Definition at line 283 of file SGObject.cpp.

bool set_kernel ( CKernel * kern )

set active kernel

Definition at line 699 of file GUIKernel.cpp.

bool set_normalization	(	char *	normalization,
		float64_t	c = `0.0`,
		float64_t	r = `0.0`
	)

set normalization

Definition at line 639 of file GUIKernel.cpp.

bool set_optimization_type ( char * opt_type )

set optimization type

Definition at line 932 of file GUIKernel.cpp.

CSGObject * shallow_copy ( ) const

virtualinherited

A shallow copy. All the SGObject instance variables will be simply assigned and SG_REF-ed.

Reimplemented in CGaussianKernel.

Definition at line 192 of file SGObject.cpp.

void unset_generic ( )

inherited

unset generic type

this has to be called in classes specializing a template class

Definition at line 303 of file SGObject.cpp.

void update_parameter_hash ( )

virtualinherited

Updates the hash of current parameter combination

Definition at line 248 of file SGObject.cpp.

Member Data Documentation

bool initialized

protected

initialized

Definition at line 180 of file GUIKernel.h.

SGIO* io

inherited

io

Definition at line 369 of file SGObject.h.

CKernel* kernel

protected

kernel

Definition at line 176 of file GUIKernel.h.

Parameter* m_gradient_parameters

inherited

parameters wrt which we can compute gradients

Definition at line 384 of file SGObject.h.

uint32_t m_hash

inherited

Hash of parameter values

Definition at line 387 of file SGObject.h.

Parameter* m_model_selection_parameters

inherited

model selection parameters

Definition at line 381 of file SGObject.h.

Parameter* m_parameters

inherited

parameters

Definition at line 378 of file SGObject.h.

Parallel* parallel

inherited

parallel

Definition at line 372 of file SGObject.h.

CSGInterface* ui

protected

ui

Definition at line 178 of file GUIKernel.h.

Version* version

inherited

version

Definition at line 375 of file SGObject.h.

The documentation for this class was generated from the following files:

Detailed Description

Public Member Functions

Public Attributes

Protected Member Functions

Protected Attributes

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation