GUIDistance.cpp

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/*
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 3 of the License, or
 * (at your option) any later version.
 *
 * Written (W) 2006-2008 Christian Gehl
 * Written (W) 1999-2008 Soeren Sonnenburg
 * Copyright (C) 1999-2008 Fraunhofer Institute FIRST and Max-Planck-Society
 */

#include <shogun/ui/GUIDistance.h>
#include <shogun/ui/SGInterface.h>

#include <string.h>

#include <shogun/lib/config.h>
#include <shogun/io/SGIO.h>
#include <shogun/io/CSVFile.h>

#include <shogun/distance/Distance.h>
#include <shogun/distance/DenseDistance.h>
#include <shogun/distance/CanberraMetric.h>
#include <shogun/distance/ChebyshewMetric.h>
#include <shogun/distance/GeodesicMetric.h>
#include <shogun/distance/JensenMetric.h>
#include <shogun/distance/ManhattanMetric.h>
#include <shogun/distance/MinkowskiMetric.h>
#include <shogun/distance/CanberraWordDistance.h>
#include <shogun/distance/ManhattanWordDistance.h>
#include <shogun/distance/HammingWordDistance.h>
#include <shogun/distance/EuclideanDistance.h>
#include <shogun/distance/SparseEuclideanDistance.h>
#include <shogun/distance/TanimotoDistance.h>
#include <shogun/distance/ChiSquareDistance.h>
#include <shogun/distance/CosineDistance.h>
#include <shogun/distance/BrayCurtisDistance.h>

#include <shogun/features/RealFileFeatures.h>
#include <shogun/features/TOPFeatures.h>
#include <shogun/features/FKFeatures.h>
#include <shogun/features/StringFeatures.h>
#include <shogun/features/DenseFeatures.h>
#include <shogun/features/Features.h>

using namespace shogun;

CGUIDistance::CGUIDistance(CSGInterface* ui_)
: CSGObject(), ui(ui_)
{
    distance=NULL;
    initialized=false;
}

CGUIDistance::~CGUIDistance()
{
    SG_UNREF(distance);
}

CDistance* CGUIDistance::get_distance()
{
    return distance;
}

bool CGUIDistance::set_distance(CDistance* dist)
{
    if (dist)
    {
        SG_REF(dist);
        SG_UNREF(distance);
        distance=dist;
        SG_DEBUG("set new distance (%p).\n", dist)

        return true;
    }
    else
        return false;
}

bool CGUIDistance::init_distance(const char* target)
{
    SG_DEBUG("init_distance start\n.")

    if (!distance)
        SG_ERROR("No distance available.\n")

    distance->set_precompute_matrix(false);
    EFeatureClass d_fclass=distance->get_feature_class();
    EFeatureType d_ftype=distance->get_feature_type();

    if (!strncmp(target, "TRAIN", 5))
    {
        CFeatures* train=ui->ui_features->get_train_features();
        if (train)
        {
            EFeatureClass fclass=train->get_feature_class();
            EFeatureType ftype=train->get_feature_type();
            if ((d_fclass==fclass || d_fclass==C_ANY || fclass==C_ANY) &&
                (d_ftype==ftype || d_ftype==F_ANY || ftype==F_ANY))

            {
                distance->init(train, train);
                initialized=true;
            }
            else
                SG_ERROR("Distance can not process this train feature type: %d %d.\n", fclass, ftype)
        }
        else
            SG_ERROR("Assign train features first.\n")
    }
    else if (!strncmp(target, "TEST", 4))
    {
        CFeatures* train=ui->ui_features->get_train_features();
        CFeatures* test=ui->ui_features->get_test_features();
        if (test)
        {
            EFeatureClass fclass=test->get_feature_class();
            EFeatureType ftype=test->get_feature_type();
            if ((d_fclass==fclass || d_fclass==C_ANY || fclass==C_ANY) &&
                (d_ftype==ftype || d_ftype==F_ANY || ftype==F_ANY))

            {
                if (!initialized)
                    SG_ERROR("Distance not initialized with training examples.\n")
                else
                {
                    SG_INFO("Initialising distance with TEST DATA, train: %p test %p\n", train, test)
                    // lhs -> always train_features; rhs -> always test_features
                    distance->init(train, test);
                }
            }
            else
                SG_ERROR("Distance can not process this test feature type: %d %d.\n", fclass, ftype)
        }
        else
            SG_ERROR("Assign train and test features first.\n")
    }
    else
    {
        SG_NOTIMPLEMENTED
        return false;
    }

    return true;

}

bool CGUIDistance::save_distance(char* param)
{
    bool result=false;
    char filename[1024]="";

    if (distance && initialized)
    {
        if ((sscanf(param, "%s", filename))==1)
        {
            CCSVFile* file=new CCSVFile(filename);
            try
            {
                distance->save(file);
            }
            catch (...)
            {
                SG_ERROR("writing to file %s failed!\n", filename)
            }

            SG_INFO("successfully written distance to \"%s\" !\n", filename)
            result=true;
            SG_UNREF(file);
        }
        else
            SG_ERROR("see help for params\n")
    }
    else
        SG_ERROR("no distance set / distance not initialized!\n")
    return result;
}

CDistance* CGUIDistance::create_generic(EDistanceType type)
{
    CDistance* dist=NULL;

    switch (type)
    {
        case D_MANHATTAN:
            dist=new CManhattanMetric(); break;
        case D_MANHATTANWORD:
            dist=new CManhattanWordDistance(); break;
        case D_CANBERRA:
            dist=new CCanberraMetric(); break;
        case D_CANBERRAWORD:
            dist=new CCanberraWordDistance(); break;
        case D_CHEBYSHEW:
            dist=new CChebyshewMetric(); break;
        case D_GEODESIC:
            dist=new CGeodesicMetric(); break;
        case D_JENSEN:
            dist=new CJensenMetric(); break;
        case D_EUCLIDEAN:
            dist=new CEuclideanDistance(); break;
        case D_SPARSEEUCLIDEAN:
            dist=new CSparseEuclideanDistance(); break;
        case D_CHISQUARE:
            dist=new CChiSquareDistance(); break;
        case D_TANIMOTO:
            dist=new CTanimotoDistance(); break;
        case D_COSINE:
            dist=new CCosineDistance(); break;
        case D_BRAYCURTIS:
            dist=new CBrayCurtisDistance(); break;
        default:
            SG_ERROR("Unknown metric/distance type %d given to create generic distance/metric.\n", type)
    }

    if (dist)
        SG_INFO("Metric/Distance of type %d created (%p).\n", type, dist)
    else
        SG_ERROR("Failed creating metric of type %d.\n", type)

    return dist;
}

CDistance* CGUIDistance::create_minkowski(float64_t k)
{
    CDistance* dist=new CMinkowskiMetric(k);
    if (dist)
        SG_INFO("Minkowski Metric created (%p), k %f.\n", dist, k)
    else
        SG_ERROR("Failed Creating Minkowski Metric, k %f.\n", k)

    return dist;
}

CDistance* CGUIDistance::create_hammingword(bool use_sign)
{
    CDistance* dist=new CHammingWordDistance(use_sign);
    if (dist)
    {
        SG_INFO("HammingWord distance created (%p), use sign %d.\n",
            dist, use_sign);
    }
    else
        SG_ERROR("Failed Creating HammingWord distance, use sign %d.\n", use_sign)

    return dist;
}