Detailed Description

Definition at line 85 of file HMM.h.

Public Member Functions
	Model ()
	Constructor - initializes all variables/structures. More...

virtual	~Model ()
	Destructor - cleans up. More...

void	sort_learn_a ()
	sorts learn_a matrix More...

void	sort_learn_b ()
	sorts learn_b matrix More...

read access functions.
For learn arrays and const arrays
int32_t	get_learn_a (int32_t line, int32_t column) const
	get entry out of learn_a matrix More...

int32_t	get_learn_b (int32_t line, int32_t column) const
	get entry out of learn_b matrix More...

int32_t	get_learn_p (int32_t offset) const
	get entry out of learn_p vector More...

int32_t	get_learn_q (int32_t offset) const
	get entry out of learn_q vector More...

int32_t	get_const_a (int32_t line, int32_t column) const
	get entry out of const_a matrix More...

int32_t	get_const_b (int32_t line, int32_t column) const
	get entry out of const_b matrix More...

int32_t	get_const_p (int32_t offset) const
	get entry out of const_p vector More...

int32_t	get_const_q (int32_t offset) const
	get entry out of const_q vector More...

float64_t	get_const_a_val (int32_t line) const
	get value out of const_a_val vector More...

float64_t	get_const_b_val (int32_t line) const
	get value out of const_b_val vector More...

float64_t	get_const_p_val (int32_t offset) const
	get value out of const_p_val vector More...

float64_t	get_const_q_val (int32_t offset) const
	get value out of const_q_val vector More...

write access functions
For learn and const arrays
void	set_learn_a (int32_t offset, int32_t value)
	set value in learn_a matrix More...

void	set_learn_b (int32_t offset, int32_t value)
	set value in learn_b matrix More...

void	set_learn_p (int32_t offset, int32_t value)
	set value in learn_p vector More...

void	set_learn_q (int32_t offset, int32_t value)
	set value in learn_q vector More...

void	set_const_a (int32_t offset, int32_t value)
	set value in const_a matrix More...

void	set_const_b (int32_t offset, int32_t value)
	set value in const_b matrix More...

void	set_const_p (int32_t offset, int32_t value)
	set value in const_p vector More...

void	set_const_q (int32_t offset, int32_t value)
	set value in const_q vector More...

void	set_const_a_val (int32_t offset, float64_t value)
	set value in const_a_val vector More...

void	set_const_b_val (int32_t offset, float64_t value)
	set value in const_b_val vector More...

void	set_const_p_val (int32_t offset, float64_t value)
	set value in const_p_val vector More...

void	set_const_q_val (int32_t offset, float64_t value)
	set value in const_q_val vector More...

Protected Attributes
learn arrays.
Everything that is to be learned is enumerated here. All values will be inititialized with random values and normalized to satisfy stochasticity.
int32_t *	learn_a
	transitions to be learned More...

int32_t *	learn_b
	emissions to be learned More...

int32_t *	learn_p
	start states to be learned More...

int32_t *	learn_q
	end states to be learned More...

constant arrays.
These arrays hold constant fields. All values that are not constant and will not be learned are initialized with 0.
int32_t *	const_a
	transitions that have constant probability More...

int32_t *	const_b
	emissions that have constant probability More...

int32_t *	const_p
	start states that have constant probability More...

int32_t *	const_q
	end states that have constant probability More...

float64_t *	const_a_val
	values for transitions that have constant probability More...

float64_t *	const_b_val
	values for emissions that have constant probability More...

float64_t *	const_p_val
	values for start states that have constant probability More...

float64_t *	const_q_val
	values for end states that have constant probability More...

Constructor & Destructor Documentation

Model ( )

Constructor - initializes all variables/structures.

Definition at line 81 of file HMM.cpp.

~Model ( )

virtual

Destructor - cleans up.

Definition at line 121 of file HMM.cpp.

Member Function Documentation

int32_t get_const_a	(	int32_t	line,
		int32_t	column
	)		const

get entry out of const_a matrix

Definition at line 135 of file HMM.h.

float64_t get_const_a_val ( int32_t line ) const

get value out of const_a_val vector

Definition at line 159 of file HMM.h.

int32_t get_const_b	(	int32_t	line,
		int32_t	column
	)		const

get entry out of const_b matrix

Definition at line 141 of file HMM.h.

float64_t get_const_b_val ( int32_t line ) const

get value out of const_b_val vector

Definition at line 165 of file HMM.h.

int32_t get_const_p ( int32_t offset ) const

get entry out of const_p vector

Definition at line 147 of file HMM.h.

float64_t get_const_p_val ( int32_t offset ) const

get value out of const_p_val vector

Definition at line 171 of file HMM.h.

int32_t get_const_q ( int32_t offset ) const

get entry out of const_q vector

Definition at line 153 of file HMM.h.

float64_t get_const_q_val ( int32_t offset ) const

get value out of const_q_val vector

Definition at line 177 of file HMM.h.

int32_t get_learn_a	(	int32_t	line,
		int32_t	column
	)		const

get entry out of learn_a matrix

Definition at line 111 of file HMM.h.

int32_t get_learn_b	(	int32_t	line,
		int32_t	column
	)		const

get entry out of learn_b matrix

Definition at line 117 of file HMM.h.

int32_t get_learn_p ( int32_t offset ) const

get entry out of learn_p vector

Definition at line 123 of file HMM.h.

int32_t get_learn_q ( int32_t offset ) const

get entry out of learn_q vector

Definition at line 129 of file HMM.h.

void set_const_a	(	int32_t	offset,
		int32_t	value
	)

set value in const_a matrix

Definition at line 223 of file HMM.h.

void set_const_a_val	(	int32_t	offset,
		float64_t	value
	)

set value in const_a_val vector

Definition at line 247 of file HMM.h.

void set_const_b	(	int32_t	offset,
		int32_t	value
	)

set value in const_b matrix

Definition at line 229 of file HMM.h.

void set_const_b_val	(	int32_t	offset,
		float64_t	value
	)

set value in const_b_val vector

Definition at line 253 of file HMM.h.

void set_const_p	(	int32_t	offset,
		int32_t	value
	)

set value in const_p vector

Definition at line 235 of file HMM.h.

void set_const_p_val	(	int32_t	offset,
		float64_t	value
	)

set value in const_p_val vector

Definition at line 259 of file HMM.h.

void set_const_q	(	int32_t	offset,
		int32_t	value
	)

set value in const_q vector

Definition at line 241 of file HMM.h.

void set_const_q_val	(	int32_t	offset,
		float64_t	value
	)

set value in const_q_val vector

Definition at line 265 of file HMM.h.

void set_learn_a	(	int32_t	offset,
		int32_t	value
	)

set value in learn_a matrix

Definition at line 199 of file HMM.h.

void set_learn_b	(	int32_t	offset,
		int32_t	value
	)

set value in learn_b matrix

Definition at line 205 of file HMM.h.

void set_learn_p	(	int32_t	offset,
		int32_t	value
	)

set value in learn_p vector

Definition at line 211 of file HMM.h.

void set_learn_q	(	int32_t	offset,
		int32_t	value
	)

set value in learn_q vector

Definition at line 217 of file HMM.h.

void sort_learn_a ( )

sorts learn_a matrix

Definition at line 95 of file HMM.h.

void sort_learn_b ( )

sorts learn_b matrix

Definition at line 101 of file HMM.h.

Member Data Documentation

int32_t* const_a

protected

transitions that have constant probability

Definition at line 325 of file HMM.h.

float64_t* const_a_val

protected

values for transitions that have constant probability

Definition at line 338 of file HMM.h.

int32_t* const_b

protected

emissions that have constant probability

Definition at line 328 of file HMM.h.

float64_t* const_b_val

protected

values for emissions that have constant probability

Definition at line 341 of file HMM.h.

int32_t* const_p

protected

start states that have constant probability

Definition at line 331 of file HMM.h.

float64_t* const_p_val

protected

values for start states that have constant probability

Definition at line 344 of file HMM.h.

int32_t* const_q

protected

end states that have constant probability

Definition at line 334 of file HMM.h.

float64_t* const_q_val

protected

values for end states that have constant probability

Definition at line 347 of file HMM.h.

int32_t* learn_a

protected

transitions to be learned

Definition at line 306 of file HMM.h.

int32_t* learn_b

protected

emissions to be learned

Definition at line 309 of file HMM.h.

int32_t* learn_p

protected

start states to be learned

Definition at line 312 of file HMM.h.

int32_t* learn_q

protected

end states to be learned

Definition at line 315 of file HMM.h.

The documentation for this class was generated from the following files:

Detailed Description

Public Member Functions

Protected Attributes

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation