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SHOGUN
4.1.0
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class PluginEstimate
The class PluginEstimate takes as input two probabilistic models (of type CLinearHMM, even though general models are possible ) and classifies examples according to the rule
\[ f({\bf x})= \log(\mbox{Pr}({\bf x}|\theta_+)) - \log(\mbox{Pr}({\bf x}|\theta_-)) \]
在文件 PluginEstimate.h 第 36 行定义.
Public 属性 | |
| SGIO * | io |
| Parallel * | parallel |
| Version * | version |
| Parameter * | m_parameters |
| Parameter * | m_model_selection_parameters |
| Parameter * | m_gradient_parameters |
| uint32_t | m_hash |
Protected 成员函数 | |
| virtual bool | train_machine (CFeatures *data=NULL) |
| virtual void | store_model_features () |
| virtual bool | is_label_valid (CLabels *lab) const |
| virtual bool | train_require_labels () const |
| virtual void | load_serializable_pre () throw (ShogunException) |
| virtual void | load_serializable_post () throw (ShogunException) |
| virtual void | save_serializable_pre () throw (ShogunException) |
| virtual void | save_serializable_post () throw (ShogunException) |
Protected 属性 | |
| float64_t | m_pos_pseudo |
| float64_t | m_neg_pseudo |
| CLinearHMM * | pos_model |
| CLinearHMM * | neg_model |
| CStringFeatures< uint16_t > * | features |
| float64_t | m_max_train_time |
| CLabels * | m_labels |
| ESolverType | m_solver_type |
| bool | m_store_model_features |
| bool | m_data_locked |
| CPluginEstimate | ( | float64_t | pos_pseudo = 1e-10, |
| float64_t | neg_pseudo = 1e-10 |
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| ) |
default constructor
| pos_pseudo | pseudo for positive model |
| neg_pseudo | pseudo for negative model |
在文件 PluginEstimate.cpp 第 22 行定义.
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virtual |
在文件 PluginEstimate.cpp 第 40 行定义.
apply machine to data if data is not specified apply to the current features
| data | (test)data to be classified |
在文件 Machine.cpp 第 152 行定义.
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virtual |
classify objects
| data | (test)data to be classified |
重载 CMachine .
在文件 PluginEstimate.cpp 第 99 行定义.
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virtualinherited |
apply machine to data in means of latent problem
被 CLinearLatentMachine 重载.
在文件 Machine.cpp 第 232 行定义.
Applies a locked machine on a set of indices. Error if machine is not locked
| indices | index vector (of locked features) that is predicted |
在文件 Machine.cpp 第 187 行定义.
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virtualinherited |
applies a locked machine on a set of indices for binary problems
被 CKernelMachine , 以及 CMultitaskLinearMachine 重载.
在文件 Machine.cpp 第 238 行定义.
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virtualinherited |
applies a locked machine on a set of indices for latent problems
在文件 Machine.cpp 第 266 行定义.
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virtualinherited |
applies a locked machine on a set of indices for multiclass problems
在文件 Machine.cpp 第 252 行定义.
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virtualinherited |
applies a locked machine on a set of indices for regression problems
被 CKernelMachine 重载.
在文件 Machine.cpp 第 245 行定义.
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virtualinherited |
applies a locked machine on a set of indices for structured problems
在文件 Machine.cpp 第 259 行定义.
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virtualinherited |
apply machine to data in means of multiclass classification problem
被 CNeuralNetwork, CCHAIDTree, CCARTree, CGaussianProcessClassification, CMulticlassMachine, CKNN, CC45ClassifierTree, CID3ClassifierTree, CDistanceMachine, CVwConditionalProbabilityTree, CGaussianNaiveBayes, CConditionalProbabilityTree, CMCLDA, CQDA, CRelaxedTree , 以及 CBaggingMachine 重载.
在文件 Machine.cpp 第 220 行定义.
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virtual |
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virtualinherited |
apply machine to data in means of regression problem
被 CKernelMachine, CWDSVMOcas, COnlineLinearMachine, CNeuralNetwork, CCHAIDTree, CStochasticGBMachine, CCARTree, CLinearMachine, CGaussianProcessRegression , 以及 CBaggingMachine 重载.
在文件 Machine.cpp 第 214 行定义.
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virtualinherited |
apply machine to data in means of SO classification problem
被 CLinearStructuredOutputMachine 重载.
在文件 Machine.cpp 第 226 行定义.
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inherited |
Builds a dictionary of all parameters in SGObject as well of those of SGObjects that are parameters of this object. Dictionary maps parameters to the objects that own them.
| dict | dictionary of parameters to be built. |
在文件 SGObject.cpp 第 597 行定义.
| bool check_models | ( | ) |
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virtualinherited |
Creates a clone of the current object. This is done via recursively traversing all parameters, which corresponds to a deep copy. Calling equals on the cloned object always returns true although none of the memory of both objects overlaps.
在文件 SGObject.cpp 第 714 行定义.
Locks the machine on given labels and data. After this call, only train_locked and apply_locked may be called
Only possible if supports_locking() returns true
| labs | labels used for locking |
| features | features used for locking |
被 CKernelMachine 重载.
在文件 Machine.cpp 第 112 行定义.
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virtualinherited |
Unlocks a locked machine and restores previous state
被 CKernelMachine 重载.
在文件 Machine.cpp 第 143 行定义.
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virtualinherited |
A deep copy. All the instance variables will also be copied.
在文件 SGObject.cpp 第 198 行定义.
Recursively compares the current SGObject to another one. Compares all registered numerical parameters, recursion upon complex (SGObject) parameters. Does not compare pointers!
May be overwritten but please do with care! Should not be necessary in most cases.
| other | object to compare with |
| accuracy | accuracy to use for comparison (optional) |
| tolerant | allows linient check on float equality (within accuracy) |
在文件 SGObject.cpp 第 618 行定义.
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virtualinherited |
get classifier type
被 CLaRank, CSVMLight, CDualLibQPBMSOSVM, CNeuralNetwork, CCCSOSVM, CLeastAngleRegression, CLDA, CKernelRidgeRegression, CLibLinearMTL, CBaggingMachine, CLibLinear, CGaussianProcessClassification, CKMeans, CLibSVR, CQDA, CGaussianNaiveBayes, CSVRLight, CMCLDA, CLinearRidgeRegression, CKNN, CScatterSVM, CGaussianProcessRegression, CSGDQN, CSVMSGD, CSVMOcas, COnlineSVMSGD, CLeastSquaresRegression, CMKLRegression, CDomainAdaptationSVMLinear, CMKLMulticlass, CWDSVMOcas, CHierarchical, CMKLOneClass, CLibSVM, CStochasticSOSVM, CMKLClassification, CDomainAdaptationSVM, CLPBoost, CPerceptron, CAveragedPerceptron, CFWSOSVM, CNewtonSVM, CLPM, CGMNPSVM, CSVMLightOneClass, CSVMLin, CMulticlassLibSVM, CLibSVMOneClass, CMPDSVM, CGPBTSVM, CGNPPSVM , 以及 CCPLEXSVM 重载.
在文件 Machine.cpp 第 92 行定义.
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virtual |
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inherited |
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inherited |
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inherited |
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virtualinherited |
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virtualinherited |
returns type of problem machine solves
被 CNeuralNetwork, CRandomForest, CCHAIDTree, CCARTree , 以及 CBaseMulticlassMachine 重载.
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inherited |
| bool get_model_params | ( | float64_t *& | pos_params, |
| float64_t *& | neg_params, | ||
| int32_t & | seq_length, | ||
| int32_t & | num_symbols | ||
| ) |
get model parameters
| pos_params | parameters of positive model |
| neg_params | parameters of negative model |
| seq_length | sequence length |
| num_symbols | numbe of symbols |
在文件 PluginEstimate.h 第 131 行定义.
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inherited |
在文件 SGObject.cpp 第 498 行定义.
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inherited |
Returns description of a given parameter string, if it exists. SG_ERROR otherwise
| param_name | name of the parameter |
在文件 SGObject.cpp 第 522 行定义.
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inherited |
Returns index of model selection parameter with provided index
| param_name | name of model selection parameter |
在文件 SGObject.cpp 第 535 行定义.
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virtual |
| int32_t get_num_params | ( | ) |
| float64_t get_parameterwise_log_odds | ( | uint16_t | obs, |
| int32_t | position | ||
| ) |
get log odds parameter-wise
| obs | observation |
| position | position |
在文件 PluginEstimate.h 第 95 行定义.
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inherited |
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virtualinherited |
If the SGSerializable is a class template then TRUE will be returned and GENERIC is set to the type of the generic.
| generic | set to the type of the generic if returning TRUE |
在文件 SGObject.cpp 第 296 行定义.
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protectedvirtualinherited |
check whether the labels is valid.
Subclasses can override this to implement their check of label types.
| lab | the labels being checked, guaranteed to be non-NULL |
被 CNeuralNetwork, CCARTree, CCHAIDTree, CGaussianProcessRegression , 以及 CBaseMulticlassMachine 重载.
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virtualinherited |
Load this object from file. If it will fail (returning FALSE) then this object will contain inconsistent data and should not be used!
| file | where to load from |
| prefix | prefix for members |
在文件 SGObject.cpp 第 369 行定义.
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protectedvirtualinherited | |||||||||||||
Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_POST is called.
| ShogunException | will be thrown if an error occurs. |
被 CKernel, CWeightedDegreePositionStringKernel, CList, CAlphabet, CLinearHMM, CGaussianKernel, CInverseMultiQuadricKernel, CCircularKernel , 以及 CExponentialKernel 重载.
在文件 SGObject.cpp 第 426 行定义.
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protectedvirtualinherited | |||||||||||||
Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_PRE is called.
| ShogunException | will be thrown if an error occurs. |
被 CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool > , 以及 CDynamicObjectArray 重载.
在文件 SGObject.cpp 第 421 行定义.
| float64_t log_derivative_neg_obsolete | ( | uint16_t | obs, |
| int32_t | pos | ||
| ) |
get obsolete negative log derivative
| obs | observation |
| pos | position |
在文件 PluginEstimate.h 第 118 行定义.
| float64_t log_derivative_pos_obsolete | ( | uint16_t | obs, |
| int32_t | pos | ||
| ) |
get obsolete positive log derivative
| obs | observation |
| pos | position |
在文件 PluginEstimate.h 第 107 行定义.
| MACHINE_PROBLEM_TYPE | ( | PT_BINARY | ) |
problem type
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virtualinherited |
在文件 SGObject.cpp 第 262 行定义.
| float64_t posterior_log_odds_obsolete | ( | uint16_t * | vector, |
| int32_t | len | ||
| ) |
obsolete posterior log odds
| vector | vector |
| len | len |
在文件 PluginEstimate.h 第 83 行定义.
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inherited |
prints all parameter registered for model selection and their type
在文件 SGObject.cpp 第 474 行定义.
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virtualinherited |
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virtualinherited |
Save this object to file.
| file | where to save the object; will be closed during returning if PREFIX is an empty string. |
| prefix | prefix for members |
在文件 SGObject.cpp 第 314 行定义.
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protectedvirtualinherited | |||||||||||||
Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_POST is called.
| ShogunException | will be thrown if an error occurs. |
被 CKernel 重载.
在文件 SGObject.cpp 第 436 行定义.
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protectedvirtualinherited | |||||||||||||
Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_PRE is called.
| ShogunException | will be thrown if an error occurs. |
被 CKernel, CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool > , 以及 CDynamicObjectArray 重载.
在文件 SGObject.cpp 第 431 行定义.
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virtual |
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inherited |
在文件 SGObject.cpp 第 41 行定义.
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inherited |
在文件 SGObject.cpp 第 46 行定义.
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inherited |
在文件 SGObject.cpp 第 51 行定义.
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inherited |
在文件 SGObject.cpp 第 56 行定义.
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inherited |
在文件 SGObject.cpp 第 61 行定义.
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inherited |
在文件 SGObject.cpp 第 66 行定义.
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inherited |
在文件 SGObject.cpp 第 71 行定义.
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inherited |
在文件 SGObject.cpp 第 76 行定义.
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inherited |
在文件 SGObject.cpp 第 81 行定义.
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inherited |
在文件 SGObject.cpp 第 86 行定义.
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inherited |
在文件 SGObject.cpp 第 91 行定义.
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inherited |
在文件 SGObject.cpp 第 96 行定义.
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inherited |
在文件 SGObject.cpp 第 101 行定义.
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inherited |
在文件 SGObject.cpp 第 106 行定义.
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inherited |
在文件 SGObject.cpp 第 111 行定义.
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inherited |
set generic type to T
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inherited |
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inherited |
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inherited |
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virtualinherited |
set labels
| lab | labels |
被 CNeuralNetwork, CGaussianProcessMachine, CCARTree, CStructuredOutputMachine, CRelaxedTree , 以及 CMulticlassMachine 重载.
在文件 Machine.cpp 第 65 行定义.
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inherited |
| void set_model_params | ( | float64_t * | pos_params, |
| float64_t * | neg_params, | ||
| int32_t | seq_length, | ||
| int32_t | num_symbols | ||
| ) |
set model parameters
| pos_params | parameters of positive model |
| neg_params | parameters of negative model |
| seq_length | sequence length |
| num_symbols | numbe of symbols |
在文件 PluginEstimate.h 第 159 行定义.
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inherited |
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virtualinherited |
Setter for store-model-features-after-training flag
| store_model | whether model should be stored after training |
在文件 Machine.cpp 第 107 行定义.
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virtualinherited |
A shallow copy. All the SGObject instance variables will be simply assigned and SG_REF-ed.
被 CGaussianKernel 重载.
在文件 SGObject.cpp 第 192 行定义.
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protectedvirtualinherited |
Stores feature data of underlying model. After this method has been called, it is possible to change the machine's feature data and call apply(), which is then performed on the training feature data that is part of the machine's model.
Base method, has to be implemented in order to allow cross-validation and model selection.
NOT IMPLEMENTED! Has to be done in subclasses
被 CKernelMachine, CKNN, CLinearMulticlassMachine, CTreeMachine< T >, CTreeMachine< ConditionalProbabilityTreeNodeData >, CTreeMachine< RelaxedTreeNodeData >, CTreeMachine< id3TreeNodeData >, CTreeMachine< VwConditionalProbabilityTreeNodeData >, CTreeMachine< CARTreeNodeData >, CTreeMachine< C45TreeNodeData >, CTreeMachine< CHAIDTreeNodeData >, CTreeMachine< NbodyTreeNodeData >, CLinearMachine, CGaussianProcessMachine, CHierarchical, CDistanceMachine, CKernelMulticlassMachine , 以及 CLinearStructuredOutputMachine 重载.
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virtualinherited |
被 CKernelMachine , 以及 CMultitaskLinearMachine 重载.
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virtualinherited |
train machine
| data | training data (parameter can be avoided if distance or kernel-based classifiers are used and distance/kernels are initialized with train data). If flag is set, model features will be stored after training. |
被 CRelaxedTree, CAutoencoder, CSGDQN , 以及 COnlineSVMSGD 重载.
在文件 Machine.cpp 第 39 行定义.
Trains a locked machine on a set of indices. Error if machine is not locked
NOT IMPLEMENTED
| indices | index vector (of locked features) that is used for training |
被 CKernelMachine , 以及 CMultitaskLinearMachine 重载.
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protectedvirtual |
train plugin estimate classifier
| data | training data (parameter can be avoided if distance or kernel-based classifiers are used and distance/kernels are initialized with train data) |
重载 CMachine .
在文件 PluginEstimate.cpp 第 48 行定义.
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protectedvirtualinherited |
returns whether machine require labels for training
被 COnlineLinearMachine, CHierarchical, CLinearLatentMachine, CVwConditionalProbabilityTree, CConditionalProbabilityTree , 以及 CLibSVMOneClass 重载.
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inherited |
unset generic type
this has to be called in classes specializing a template class
在文件 SGObject.cpp 第 303 行定义.
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virtualinherited |
Updates the hash of current parameter combination
在文件 SGObject.cpp 第 248 行定义.
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protected |
features
在文件 PluginEstimate.h 第 226 行定义.
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inherited |
io
在文件 SGObject.h 第 369 行定义.
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inherited |
parameters wrt which we can compute gradients
在文件 SGObject.h 第 384 行定义.
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inherited |
Hash of parameter values
在文件 SGObject.h 第 387 行定义.
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inherited |
model selection parameters
在文件 SGObject.h 第 381 行定义.
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protected |
pseudo count for negative class
在文件 PluginEstimate.h 第 218 行定义.
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inherited |
parameters
在文件 SGObject.h 第 378 行定义.
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protected |
pseudo count for positive class
在文件 PluginEstimate.h 第 216 行定义.
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protectedinherited |
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protectedinherited |
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protected |
negative model
在文件 PluginEstimate.h 第 223 行定义.
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inherited |
parallel
在文件 SGObject.h 第 372 行定义.
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protected |
positive model
在文件 PluginEstimate.h 第 221 行定义.
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inherited |
version
在文件 SGObject.h 第 375 行定义.
