- c -
- cache_example()
: CVwCacheWriter
, CVwNativeCacheWriter
- cache_kernel_row()
: CKernel
- cache_multiple_kernel_rows()
: CKernel
- cache_reset()
: CKernel
- calc_feature_space_dimensions()
: CPolyFeatures
- calculate_svm_model()
: CSVMLight
- calibrate()
: COnlineSVMSGD
, CSGDQN
, CSVMSGD
- call_mkl_callback()
: CSVMLight
, CSVRLight
- calloc_reserve()
: v_array< T >
- cancel_computations()
: CSignal
- CCache()
: CCache< T >
- CCanberraMetric()
: CCanberraMetric
- CCanberraWordDistance()
: CCanberraWordDistance
- CCauchyKernel()
: CCauchyKernel
- CChebyshewMetric()
: CChebyshewMetric
- CChi2Kernel()
: CChi2Kernel
- CChiSquareDistance()
: CChiSquareDistance
- CCircularKernel()
: CCircularKernel
- CCombinedDotFeatures()
: CCombinedDotFeatures
- CCombinedFeatures()
: CCombinedFeatures
- CCombinedKernel()
: CCombinedKernel
- CCommUlongStringKernel()
: CCommUlongStringKernel
- CCommWordStringKernel()
: CCommWordStringKernel
- CCompressor()
: CCompressor
- CConstKernel()
: CConstKernel
- CContingencyTableEvaluation()
: CContingencyTableEvaluation
- CConverter()
: CConverter
- CCosineDistance()
: CCosineDistance
- CCplex()
: CCplex
- CCPLEXSVM()
: CCPLEXSVM
- CCrossCorrelationMeasure()
: CCrossCorrelationMeasure
- CCrossValidation()
: CCrossValidation
- CCustomDistance()
: CCustomDistance
- CCustomKernel()
: CCustomKernel
- ceil()
: CMath
- center_matrix()
: CMath
- check_alphabet()
: CAlphabet
- check_alphabet_size()
: CAlphabet
- check_cache_metadata()
: CVwNativeCacheReader
- check_feature_compatibility()
: CFeatures
- check_feature_obj_compatibility()
: CCombinedFeatures
- check_lpx_status()
: CMKL
- check_model_derivatives()
: CHMM
- check_model_derivatives_combined()
: CHMM
- check_models()
: CPluginEstimate
- check_optimality()
: CSVMLight
- check_svm_arrays()
: CDynProg
- check_treemem()
: CTrie< Trie >
- chop()
: CHMM
, CGUIHMM
- clamp()
: CMath
- class_count()
: CLaRank
- classic_embedding()
: CMultidimensionalScaling
- classify()
: CGUIClassifier
, CGUIHMM
- classify_byte_linear()
: CGUIClassifier
- classify_distancemachine()
: CGUIClassifier
- classify_example()
: CGUIClassifier
, CGUIHMM
- classify_example_one_vs_one()
: CMultiClassSVM
- classify_example_one_vs_rest()
: CMultiClassSVM
- classify_for_multiple_k()
: CKNN
- classify_kernelmachine()
: CGUIClassifier
- classify_linear()
: CGUIClassifier
- classify_NN()
: CKNN
- classify_one_vs_one()
: CMultiClassSVM
- classify_one_vs_rest()
: CMultiClassSVM
, CScatterSVM
- clean()
: CGUIFeatures
- clean_kernel()
: CGUIKernel
- clean_preproc()
: CGUIPreprocessor
- clean_preprocessors()
: CFeatures
- clean_tsparse()
: CSparseFeatures< ST >
- cleanup()
: CSpectrumMismatchRBFKernel
, CSpectrumRBFKernel
, CSplineKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
, CBitString
, CCplex
, CDecompressString< ST >
, CDimensionReductionPreprocessor
, CKernelPCA
, CLogPlusOne
, CNormOne
, CPCA
, CPreprocessor
, CPruneVarSubMean
, CRandomFourierGaussPreproc
, CLPBoost
, CSortUlongString
, CSortWordString
, CSubGradientLPM
, CGUIStructure
, CMultiClassSVM
, CSubGradientSVM
, CGMM
, CAttenuatedEuclidianDistance
, CBrayCurtisDistance
, CCanberraMetric
, CCanberraWordDistance
, CChebyshewMetric
, CChiSquareDistance
, CWaveletKernel
, CCosineDistance
, CCustomDistance
, CDistance
, CEuclidianDistance
, CGeodesicMetric
, CHammingWordDistance
, CJensenMetric
, CKernelDistance
, CManhattanMetric
, CManhattanWordDistance
, CMinkowskiMetric
, CRealDistance
, CSimpleDistance< ST >
, CSparseDistance< ST >
, CSparseEuclidianDistance
, CStringDistance< ST >
, CTanimotoDistance
, CStringFeatures< ST >
, CStringFileFeatures< ST >
, CANOVAKernel
, CBesselKernel
, CCombinedKernel
, CCommUlongStringKernel
, CCommWordStringKernel
, CCustomKernel
, CExponentialKernel
, CFixedDegreeStringKernel
, CGaussianKernel
, CGaussianMatchStringKernel
, CHistogramWordStringKernel
, CKernel
, CWeightedCommWordStringKernel
, CLinearKernel
, CLinearStringKernel
, CLocalAlignmentStringKernel
, COligoStringKernel
, CPolyKernel
, CPolyMatchStringKernel
, CPolyMatchWordStringKernel
, CPyramidChi2
, CSalzbergWordStringKernel
, CSigmoidKernel
, CSimpleLocalityImprovedStringKernel
, CSNPStringKernel
, CSparseSpatialSampleStringKernel
- cleanup_cplex()
: CMKL
- cleanup_feature_vector()
: CStringFeatures< ST >
, CStringFileFeatures< ST >
- cleanup_feature_vectors()
: CStringFeatures< ST >
- cleanup_glpk()
: CMKL
- cleanup_POIM2()
: CWeightedDegreePositionStringKernel
- clear()
: CSignal
, CPlifArray
- clear_array()
: DynArray< T >
, CArray< T >
, CDynamicArray< T >
, CDynamicObjectArray< T >
- clear_cancel()
: CSignal
- clear_histogram()
: CAlphabet
- clear_index()
: CSVMLight
- clear_model()
: CHMM
- clear_model_defined()
: CHMM
- clear_normal()
: CCombinedKernel
, CCommUlongStringKernel
, CCommWordStringKernel
, CKernel
, CLinearKernel
, CLinearStringKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- clone_vector()
: SGVector< T >
, CMath
- close()
: CFile
, CSerializableFile
, CStreamingFile
- close_bracket()
: CHMM
- close_file()
: CIOBuffer
- close_stream()
: CBinaryStream< T >
- cluster()
: CGMM
- clustknb()
: CKMeans
- cntsrtna()
: CSparseSpatialSampleStringKernel
- combine_and_clip()
: CSGDQN
- comma_or_space()
: CHMM
- compact_nodes()
: CTrie< Trie >
- compare()
: CTrie< Trie >
- compare_traverse()
: CTrie< Trie >
- compress()
: CCompressor
- compute()
: CPolyMatchStringKernel
, CPolyMatchWordStringKernel
, CPyramidChi2
, CRationalQuadraticKernel
, CRegulatoryModulesStringKernel
, CSparseSpatialSampleStringKernel
, CSpectrumMismatchRBFKernel
, CSpectrumRBFKernel
, CSphericalKernel
, CSplineKernel
, CTensorProductPairKernel
, CTStudentKernel
, CWaveKernel
, CWaveletKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeRBFKernel
, CWeightedDegreeStringKernel
, CSimpleLocalityImprovedStringKernel
, CSNPStringKernel
, CSalzbergWordStringKernel
, CSigmoidKernel
, CCommUlongStringKernel
, CAttenuatedEuclidianDistance
, CBrayCurtisDistance
, CCanberraMetric
, CCanberraWordDistance
, CChebyshewMetric
, CChiSquareDistance
, CPowerKernel
, CCosineDistance
, CCustomDistance
, CDistance
, CEuclidianDistance
, CGeodesicMetric
, CHammingWordDistance
, CJensenMetric
, CKernelDistance
, CManhattanMetric
, CManhattanWordDistance
, CMinkowskiMetric
, CRealDistance
, CSparseEuclidianDistance
, CTanimotoDistance
, CANOVAKernel
, CAUCKernel
, CBesselKernel
, CCauchyKernel
, CChi2Kernel
, CCircularKernel
, CCombinedKernel
, CCommWordStringKernel
, CConstKernel
, CCustomKernel
, CDiagKernel
, CPolyKernel
, CDistanceKernel
, CDistantSegmentsKernel
, CDotKernel
, CLogKernel
, CExponentialKernel
, CFixedDegreeStringKernel
, CGaussianKernel
, CKernel
, CGaussianMatchStringKernel
, CGaussianShiftKernel
, CGaussianShortRealKernel
, CHistogramIntersectionKernel
, CHistogramWordStringKernel
, CInverseMultiQuadricKernel
, CLinearStringKernel
, CLocalAlignmentStringKernel
, CLocalityImprovedStringKernel
, CMatchWordStringKernel
, CMultiquadricKernel
, COligoStringKernel
- compute_abs_weights()
: CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
, CTrie< Trie >
- compute_abs_weights_tree()
: CTrie< Trie >
- compute_all()
: CSpectrumMismatchRBFKernel
- compute_batch()
: CCombinedKernel
, CKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- compute_batch_helper()
: CWeightedDegreeStringKernel
, CWeightedDegreePositionStringKernel
- compute_by_subkernel()
: CCombinedKernel
, CKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- compute_by_tree()
: CWeightedDegreeStringKernel
, CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- compute_by_tree_helper()
: CTrie< Trie >
- compute_consensus()
: CCommWordStringKernel
, CWeightedDegreePositionStringKernel
- compute_diag()
: CCommWordStringKernel
- compute_double()
: CSparseSpatialSampleStringKernel
- compute_eigenvectors()
: CMath
- compute_elasticnet_dual_objective()
: CMKL
- compute_exact_norm()
: CVowpalWabbit
- compute_exact_norm_quad()
: CVowpalWabbit
- compute_feature_vector()
: CFKFeatures
, CRealFileFeatures
, CSimpleFeatures< ST >
, CTOPFeatures
, CStringFeatures< ST >
- compute_H()
: CMPDSVM
- compute_helper()
: CSpectrumMismatchRBFKernel
, CWeightedCommWordStringKernel
, CCommWordStringKernel
- compute_helper_all()
: CSpectrumMismatchRBFKernel
- compute_index()
: CHistogramWordStringKernel
, CSalzbergWordStringKernel
, CSVMLight
- compute_kernel()
: CSVMLight
, CSVRLight
- compute_kernel_helper()
: CSVMLight
, CCombinedKernel
- compute_log_PDF()
: CGaussian
- compute_loss()
: CSegmentLoss
- compute_matrices_for_optimization()
: CSVMLight
- compute_matrices_for_optimization_parallel()
: CSVMLight
- compute_min_subgradient()
: CSubGradientLPM
, CSubGradientSVM
- compute_mkl_dual_objective()
: CMKL
, CMKLRegression
- compute_mkl_primal_objective()
: CMKL
- compute_nbest_paths()
: CDynProg
- compute_node_similarity()
: CTaxonomy
- compute_normalization_const()
: CImplicitWeightedSpecFeatures
- compute_num_features()
: CTOPFeatures
- compute_objective()
: CSubGradientSVM
, CSubGradientLPM
- compute_objective_function()
: CSVRLight
, CSVMLight
- compute_optimal_betas_block_norm()
: CMKL
- compute_optimal_betas_directly()
: CMKL
- compute_optimal_betas_elasticnet()
: CMKL
- compute_optimal_betas_newton()
: CMKL
- compute_optimal_betas_via_cplex()
: CMKL
- compute_optimal_betas_via_glpk()
: CMKL
- compute_optimized()
: CCommUlongStringKernel
, CCombinedKernel
, CKernel
, CLinearStringKernel
, CWeightedDegreePositionStringKernel
, CCommWordStringKernel
, CLinearKernel
, CWeightedDegreeStringKernel
, CWeightedCommWordStringKernel
- compute_optimized_kernel_helper()
: CCombinedKernel
- compute_output()
: CWDSVMOcas
, CSVMOcas
- compute_output_helper()
: CWDSVMOcas
- compute_PDF()
: CGaussian
- compute_plif_matrix()
: CPlifMatrix
- compute_POIM()
: CWeightedDegreePositionStringKernel
- compute_POIM2()
: CWeightedDegreePositionStringKernel
- compute_projection()
: CSubGradientSVM
, CSubGradientLPM
- compute_ratio()
: CSGDQN
- compute_rec1()
: CANOVAKernel
- compute_rec2()
: CANOVAKernel
- compute_reconstruction_error()
: CLocallyLinearEmbedding
- compute_relevant_indizes()
: CTOPFeatures
- compute_row_start()
: CKernel
- compute_scores()
: CContingencyTableEvaluation
- compute_scoring()
: CWeightedDegreePositionStringKernel
, CCommWordStringKernel
, CWeightedCommWordStringKernel
, CPositionalPWM
- compute_scoring_helper()
: CTrie< Trie >
- compute_signal_plifs()
: CPlifMatrix
- compute_sparse_feature_vector()
: CSparseFeatures< ST >
- compute_squared()
: CSparseFeatures< ST >
, CStreamingSparseFeatures< T >
- compute_squared_norm()
: CSparseFeatures< ST >
- compute_sum_alpha()
: CMKL
, CMKLClassification
, CMKLRegression
, CMKLOneClass
- compute_sum_beta()
: CMKL
- compute_svm_dual_objective()
: CSVM
- compute_svm_primal_objective()
: CSVM
- compute_symbol_mask_table()
: CStringFeatures< ST >
- compute_task_similarity()
: CMultitaskKernelPlifNormalizer
- compute_triple()
: CSparseSpatialSampleStringKernel
- compute_using_block()
: CWeightedDegreeStringKernel
- compute_W()
: CSVMOcas
- compute_w()
: CPositionalPWM
- compute_W()
: CWDSVMOcas
- compute_wds()
: CRegulatoryModulesStringKernel
- compute_with_mismatch()
: CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- compute_without_mismatch()
: CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- compute_without_mismatch_matrix()
: CWeightedDegreePositionStringKernel
, CWeightedDegreeStringKernel
- compute_without_mismatch_position_weights()
: CWeightedDegreePositionStringKernel
- computeGap()
: CLaRank
- computeW2()
: CLaRank
- computeweights()
: MKLMultiClassGradient
, MKLMultiClassOptimizationBase
, MKLMultiClassGLPK
- concat_filename()
: SGIO
- confidence_intervals_mean()
: CStatistics
- construct_embedding()
: CLocalityPreservingProjections
, CLinearLocalTangentSpaceAlignment
, CLocallyLinearEmbedding
, CLaplacianEigenmaps
, CNeighborhoodPreservingEmbedding
- construct_weight_matrix()
: CLocalTangentSpaceAlignment
, CHessianLocallyLinearEmbedding
, CKernelLocallyLinearEmbedding
, CKernelLocalTangentSpaceAlignment
, CLocallyLinearEmbedding
- contains()
: CSet< T >
- contains_parameter()
: Parameter
- converge()
: CGUIHMM
- converged()
: CMKL
- convergence_criteria()
: CGUIHMM
- convert_simple_char_to_simple_align()
: CGUIFeatures
- convert_simple_char_to_string_char()
: CGUIFeatures
- convert_simple_real_to_sparse_real()
: CGUIFeatures
- convert_simple_word_to_simple_salzberg()
: CGUIFeatures
- convert_sparse_real_to_simple_real()
: CGUIFeatures
- convert_string_byte_to_spec_word()
: CGUIFeatures
- convert_string_char_to_string_generic()
: CGUIFeatures
- convert_string_word_to_simple_fk()
: CGUIFeatures
- convert_string_word_to_simple_top()
: CGUIFeatures
- convert_to_log()
: CHMM
- copy()
: CRandomFourierGaussPreproc
- copy_example()
: CParseBuffer< T >
- copy_example_into_buffer()
: CInputParser< T >
- copy_feature_matrix()
: CSimpleFeatures< ST >
- copy_features()
: CStringFeatures< ST >
- copy_histogram()
: CAlphabet
- copy_model()
: CHMM
- copy_subset()
: CFeatures
, CStringFeatures< ST >
, CSparseFeatures< ST >
, CSimpleFeatures< ST >
- copy_tree()
: CParameterCombination
- count()
: CTrie< Trie >
- countAndUpdate()
: CSparseSpatialSampleStringKernel
- crc32()
: CHash
- create()
: CTrie< Trie >
, CBitString
- create_chi2()
: CGUIKernel
- create_combined()
: CGUIKernel
- create_commstring()
: CGUIKernel
- create_const()
: CGUIKernel
- create_custom()
: CGUIKernel
- create_diag()
: CGUIKernel
- create_distance()
: CGUIKernel
- create_empty_tries()
: CWeightedDegreeStringKernel
, CWeightedDegreePositionStringKernel
- create_fixeddegreestring()
: CGUIKernel
- create_gaussian()
: CGUIKernel
- create_gaussianshift()
: CGUIKernel
- create_generic()
: CGUIPreprocessor
, CGUIDistance
- create_hammingword()
: CGUIDistance
- create_histogramword()
: CGUIKernel
- create_linear()
: CGUIKernel
- create_linearbyte()
: CGUIKernel
- create_linearstring()
: CGUIKernel
- create_linearword()
: CGUIKernel
- create_localalignmentstring()
: CGUIKernel
- create_localityimprovedstring()
: CGUIKernel
- create_matchwordstring()
: CGUIKernel
- create_minkowski()
: CGUIDistance
- create_multiclass_svm()
: CMultiClassSVM
- create_new_model()
: CKernelMachine
- create_oligo()
: CGUIKernel
- create_pca()
: CGUIPreprocessor
- create_plifs()
: CPlifMatrix
- create_poly()
: CGUIKernel
- create_polymatchstring()
: CGUIKernel
- create_polymatchwordstring()
: CGUIKernel
- create_prunevarsubmean()
: CGUIPreprocessor
- create_random()
: CStringFeatures< ST >
- create_salzbergword()
: CGUIKernel
- create_sigmoid()
: CGUIKernel
- create_sparsegaussian()
: CGUIKernel
- create_sparselinear()
: CGUIKernel
- create_sparsepoly()
: CGUIKernel
- create_spectrummismatchrbf()
: CGUIKernel
- create_tppk()
: CGUIKernel
- create_wavelet()
: CGUIKernel
- create_weighteddegreepositionstring()
: CGUIKernel
- create_weighteddegreepositionstring2()
: CGUIKernel
- create_weighteddegreepositionstring3()
: CGUIKernel
- create_weighteddegreerbf()
: CGUIKernel
- create_weighteddegreestring()
: CGUIKernel
- create_word_string()
: CDynProg
- cur_runtime()
: CTime
- cur_runtime_diff()
: CTime
- cur_runtime_diff_sec()
: CTime
- cur_time_diff()
: CTime
SHOGUN Machine Learning Toolbox - Documentation